RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 DNAJC5BQ9UF47 199 aa14.23□□□□□ -0.13
COL3A1-201ENST00000304636 AMFRQ9UKV5 643 aa14.23□□□□□ -0.13
COL3A1-201ENST00000304636 PCDHA5Q9Y5H7 936 aa14.23□□□□□ -0.13
COL3A1-201ENST00000304636 ATP7AQ04656 1500 aa14.23□□□□□ -0.13
COL3A1-201ENST00000304636 ERVK-7P63135 1459 aa14.23□□□□□ -0.13
COL3A1-201ENST00000304636 F8W031 263 aaPredicted RBP14.23□□□□□ -0.13
COL3A1-201ENST00000304636 ADAMTS2O95450 1211 aa14.23□□□□□ -0.13
COL3A1-201ENST00000304636 KRT5P13647 590 aa14.23□□□□□ -0.13
COL3A1-201ENST00000304636 ADD1P35611 737 aaKnown RBP14.23□□□□□ -0.13
COL3A1-201ENST00000304636 CCT5P48643 541 aa14.23□□□□□ -0.13
COL3A1-201ENST00000304636 UAP1Q16222 522 aaPredicted RBP14.23□□□□□ -0.13
COL3A1-201ENST00000304636 SLC35F6Q8N357 371 aa14.23□□□□□ -0.13
COL3A1-201ENST00000304636 MAGI3Q5TCQ9 1506 aa14.23□□□□□ -0.13
COL3A1-201ENST00000304636 CALCRLQ16602 461 aa14.22□□□□□ -0.13
COL3A1-201ENST00000304636 WDR44Q5JSH3 913 aa14.22□□□□□ -0.13
COL3A1-201ENST00000304636 LIN9Q5TKA1 542 aa14.22□□□□□ -0.13
COL3A1-201ENST00000304636 APBB1IPQ7Z5R6 666 aaPredicted RBP14.22□□□□□ -0.13
COL3A1-201ENST00000304636 TCHPQ9BT92 498 aa14.22□□□□□ -0.13
COL3A1-201ENST00000304636 NLRC4Q9NPP4 1024 aa14.22□□□□□ -0.13
COL3A1-201ENST00000304636 TPTE2Q6XPS3 522 aa14.22□□□□□ -0.13
COL3A1-201ENST00000304636 PDLIM2Q96JY6 352 aa14.22□□□□□ -0.13
COL3A1-201ENST00000304636 VCX3BQ9H321 246 aa14.22□□□□□ -0.13
COL3A1-201ENST00000304636 CLASP1Q7Z460 1538 aa14.22□□□□□ -0.13
COL3A1-201ENST00000304636 MROH5Q6ZUA9 1318 aa14.22□□□□□ -0.13
COL3A1-201ENST00000304636 NDC80O14777 642 aa14.22□□□□□ -0.13
COL3A1-201ENST00000304636 ARID4AP29374 1257 aaPredicted RBP14.22□□□□□ -0.13
COL3A1-201ENST00000304636 CASP14P31944 242 aa14.22□□□□□ -0.13
COL3A1-201ENST00000304636 TERF2Q15554 542 aa14.22□□□□□ -0.13
COL3A1-201ENST00000304636 NSUN7Q8NE18 718 aaKnown RBP14.22□□□□□ -0.13
COL3A1-201ENST00000304636 MAIP1Q8WWC4 291 aa14.22□□□□□ -0.13
COL3A1-201ENST00000304636 HOMER3Q9NSC5 361 aa14.22□□□□□ -0.13
COL3A1-201ENST00000304636 ADCY7P51828 1080 aa14.22□□□□□ -0.13
COL3A1-201ENST00000304636 FBXO38Q6PIJ6 1188 aa14.22□□□□□ -0.13
COL3A1-201ENST00000304636 RAB3IPQ96QF0 476 aaPredicted RBP14.22□□□□□ -0.13
COL3A1-201ENST00000304636 MPHOSPH6Q99547 160 aaKnown RBP14.22□□□□□ -0.13
COL3A1-201ENST00000304636 MAK16Q9BXY0 300 aaKnown RBP14.22□□□□□ -0.13
COL3A1-201ENST00000304636 COPB1P53618 953 aaKnown RBP14.22□□□□□ -0.13
COL3A1-201ENST00000304636 PARP10Q53GL7 1025 aa14.22□□□□□ -0.13
COL3A1-201ENST00000304636 CFAP57Q96MR6 1250 aa14.22□□□□□ -0.13
COL3A1-201ENST00000304636 GSDMAQ96QA5 445 aa14.22□□□□□ -0.13
COL3A1-201ENST00000304636 FAM169AQ9Y6X4 670 aa14.22□□□□□ -0.13
COL3A1-201ENST00000304636 CARMIL3Q8ND23 1372 aa14.22□□□□□ -0.13
COL3A1-201ENST00000304636 SH3TC1Q8TE82 1336 aa14.21□□□□□ -0.13
COL3A1-201ENST00000304636 KCNK3O14649 394 aa14.21□□□□□ -0.13
COL3A1-201ENST00000304636 CCDC14Q49A88 953 aa14.21□□□□□ -0.13
COL3A1-201ENST00000304636 SIRT2Q8IXJ6 389 aa14.21□□□□□ -0.13
COL3A1-201ENST00000304636 FAN1Q9Y2M0 1017 aa14.21□□□□□ -0.13
COL3A1-201ENST00000304636 ARHGEF5Q12774 1597 aa14.21□□□□□ -0.13
COL3A1-201ENST00000304636 CLEC17AQ6ZS10 378 aa14.21□□□□□ -0.13
COL3A1-201ENST00000304636 PARD6BQ9BYG5 372 aa14.21□□□□□ -0.13
COL3A1-201ENST00000304636 KRIT1O00522 736 aa14.21□□□□□ -0.13
COL3A1-201ENST00000304636 BCRP11274 1271 aa14.21□□□□□ -0.13
COL3A1-201ENST00000304636 NCBP1Q09161 790 aaKnown RBP14.21□□□□□ -0.13
COL3A1-201ENST00000304636 LSM14BQ9BX40 385 aaKnown RBP14.21□□□□□ -0.13
COL3A1-201ENST00000304636 A0A087WUV0 522 aaPredicted RBP14.21□□□□□ -0.14
COL3A1-201ENST00000304636 PPARAQ07869 468 aa14.21□□□□□ -0.14
COL3A1-201ENST00000304636 SEPT6Q14141 434 aa14.21□□□□□ -0.14
COL3A1-201ENST00000304636 SNCBQ16143 134 aa14.21□□□□□ -0.14
COL3A1-201ENST00000304636 SARM1Q6SZW1 724 aa14.21□□□□□ -0.14
COL3A1-201ENST00000304636 CERS3Q8IU89 383 aa14.21□□□□□ -0.14
COL3A1-201ENST00000304636 FANCBQ8NB91 859 aa14.21□□□□□ -0.14
COL3A1-201ENST00000304636 AGTPBP1Q9UPW5 1226 aa14.21□□□□□ -0.14
COL3A1-201ENST00000304636 GPCPD1Q9NPB8 672 aa14.2□□□□□ -0.14
COL3A1-201ENST00000304636 RIPOR2Q9Y4F9 1068 aa14.2□□□□□ -0.14
COL3A1-201ENST00000304636 BTBD18B2RXH4 712 aa14.2□□□□□ -0.14
COL3A1-201ENST00000304636 HGSO14964 777 aaPredicted RBP14.2□□□□□ -0.14
COL3A1-201ENST00000304636 RPN1P04843 607 aaKnown RBP14.2□□□□□ -0.14
COL3A1-201ENST00000304636 STX2P32856 288 aa14.2□□□□□ -0.14
COL3A1-201ENST00000304636 PPARDQ03181 441 aa14.2□□□□□ -0.14
COL3A1-201ENST00000304636 TTC37Q6PGP7 1564 aa14.2□□□□□ -0.14
COL3A1-201ENST00000304636 GPIHBP1Q8IV16 184 aa14.2□□□□□ -0.14
COL3A1-201ENST00000304636 TEX11Q8IYF3 940 aa14.2□□□□□ -0.14
COL3A1-201ENST00000304636 IL17REQ8NFR9 667 aa14.2□□□□□ -0.14
COL3A1-201ENST00000304636 KLHL14Q9P2G3 628 aa14.2□□□□□ -0.14
COL3A1-201ENST00000304636 DNM3Q9UQ16 869 aa14.2□□□□□ -0.14
COL3A1-201ENST00000304636 FGAP02671 866 aa14.2□□□□□ -0.14
COL3A1-201ENST00000304636 HIBADHP31937 336 aaKnown RBP14.2□□□□□ -0.14
COL3A1-201ENST00000304636 NELFCDQ8IXH7 590 aa14.2□□□□□ -0.14
COL3A1-201ENST00000304636 LINC00301Q8NCQ3 95 aa14.2□□□□□ -0.14
COL3A1-201ENST00000304636 NT5C3AQ9H0P0 336 aa14.2□□□□□ -0.14
COL3A1-201ENST00000304636 PLEKHA4Q9H4M7 779 aa14.2□□□□□ -0.14
COL3A1-201ENST00000304636 KDM6BO15054 1643 aa14.2□□□□□ -0.14
COL3A1-201ENST00000304636 hCG_1642624A0A1W2PR95 340 aa14.2□□□□□ -0.14
COL3A1-201ENST00000304636 PHLDB2Q86SQ0 1253 aa14.2□□□□□ -0.14
COL3A1-201ENST00000304636 VSTM4Q8IW00 320 aa14.2□□□□□ -0.14
COL3A1-201ENST00000304636 VPS52Q8N1B4 723 aa14.2□□□□□ -0.14
COL3A1-201ENST00000304636 AATKQ6ZMQ8 1374 aa14.2□□□□□ -0.14
COL3A1-201ENST00000304636 MED23Q9ULK4 1368 aa14.2□□□□□ -0.14
COL3A1-201ENST00000304636 PNMA6AP0CW24 399 aaPredicted RBP14.19□□□□□ -0.14
COL3A1-201ENST00000304636 PSMC4P43686 418 aa14.19□□□□□ -0.14
COL3A1-201ENST00000304636 ERCC3P19447 782 aa14.19□□□□□ -0.14
COL3A1-201ENST00000304636 EPHB4P54760 987 aa14.19□□□□□ -0.14
COL3A1-201ENST00000304636 RBL2Q08999 1139 aa14.19□□□□□ -0.14
COL3A1-201ENST00000304636 SAP30BPQ9UHR5 308 aaKnown RBP14.19□□□□□ -0.14
COL3A1-201ENST00000304636 KRT15P19012 456 aa14.19□□□□□ -0.14
COL3A1-201ENST00000304636 SLFNL1Q499Z3 407 aa14.19□□□□□ -0.14
COL3A1-201ENST00000304636 WDR78Q5VTH9 848 aa14.19□□□□□ -0.14
COL3A1-201ENST00000304636 MICAL1Q8TDZ2 1067 aa14.19□□□□□ -0.14
COL3A1-201ENST00000304636 FNBP1Q96RU3 617 aa14.19□□□□□ -0.14
COL3A1-201ENST00000304636 C19orf44Q9H6X5 657 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms