RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 SBK1Q52WX2 424 aa21.3■■□□□ 1
RNF139-201ENST00000303545 CCAR2Q8N163 923 aaKnown RBP21.3■■□□□ 1
RNF139-201ENST00000303545 TNFRSF25Q93038 417 aa21.3■■□□□ 1
RNF139-201ENST00000303545 HOOK1Q9UJC3 728 aaKnown RBP21.3■■□□□ 1
RNF139-201ENST00000303545 DLEC1Q9Y238 1755 aa21.3■■□□□ 1
RNF139-201ENST00000303545 XDHP47989 1333 aa21.3■■□□□ 1
RNF139-201ENST00000303545 PTPN14Q15678 1187 aa21.3■■□□□ 1
RNF139-201ENST00000303545 KLHL10Q6JEL2 608 aa21.3■■□□□ 1
RNF139-201ENST00000303545 SMYD4Q8IYR2 804 aaPredicted RBP21.3■■□□□ 1
RNF139-201ENST00000303545 IMPACTQ9P2X3 320 aa21.3■■□□□ 1
RNF139-201ENST00000303545 GOLGA8HP0CJ92 632 aa21.29■■□□□ 1
RNF139-201ENST00000303545 ZNF579Q8NAF0 562 aaKnown RBP21.29■■□□□ 1
RNF139-201ENST00000303545 PNMA1Q8ND90 353 aa21.29■■□□□ 1
RNF139-201ENST00000303545 WDR66Q8TBY9 1149 aa21.29■■□□□ 1
RNF139-201ENST00000303545 RGL2O15211 777 aa21.29■■□□□ 1
RNF139-201ENST00000303545 CDC25AP30304 524 aa21.29■■□□□ 1
RNF139-201ENST00000303545 STX17P56962 302 aa21.29■■□□□ 1
RNF139-201ENST00000303545 ZNF804AQ7Z570 1209 aa21.29■■□□□ 1
RNF139-201ENST00000303545 SEPT12Q8IYM1 358 aa21.29■■□□□ 1
RNF139-201ENST00000303545 MKRN1Q9UHC7 482 aaKnown RBP21.29■■□□□ 1
RNF139-201ENST00000303545 STX8Q9UNK0 236 aa21.29■■□□□ 1
RNF139-201ENST00000303545 NFE2L3Q9Y4A8 694 aa21.29■■□□□ 1
RNF139-201ENST00000303545 E4F1Q66K89 784 aaPredicted RBP21.28■■□□□ 1
RNF139-201ENST00000303545 MED15Q96RN5 788 aa21.28■■□□□ 1
RNF139-201ENST00000303545 SAMSN1Q9NSI8 373 aaKnown RBP21.28■■□□□ 1
RNF139-201ENST00000303545 INTS13Q9NVM9 706 aa21.28■■□□□ 1
RNF139-201ENST00000303545 LEMD3Q9Y2U8 911 aa21.28■■□□□ 1
RNF139-201ENST00000303545 TSPY3P0CV98 308 aa21.28■■□□□ 1
RNF139-201ENST00000303545 TSPY8P0CW00 308 aa21.28■■□□□ 1
RNF139-201ENST00000303545 CDK11BP21127 795 aaKnown RBP21.28■■□□□ 1
RNF139-201ENST00000303545 PKNOX2Q96KN3 472 aa21.28■■□□□ 1
RNF139-201ENST00000303545 SARSP49591 514 aaKnown RBP21.27■■□□□ 1
RNF139-201ENST00000303545 MORC3Q14149 939 aa21.27■■□□□ 1
RNF139-201ENST00000303545 PFKFB3Q16875 520 aaPredicted RBP21.27■■□□□ 1
RNF139-201ENST00000303545 FAM205AQ6ZU69 1335 aa21.27■■□□□ 1
RNF139-201ENST00000303545 BLZF1Q9H2G9 400 aa21.27■■□□□ 1
RNF139-201ENST00000303545 AFF2P51816 1311 aa21.27■□□□□ 0.99
RNF139-201ENST00000303545 SERPINB2P05120 415 aa21.26■□□□□ 0.99
RNF139-201ENST00000303545 GYS1P13807 737 aa21.26■□□□□ 0.99
RNF139-201ENST00000303545 BTDP43251 543 aa21.26■□□□□ 0.99
RNF139-201ENST00000303545 TYW1BQ6NUM6 668 aa21.26■□□□□ 0.99
RNF139-201ENST00000303545 CCDC150Q8NCX0 1101 aa21.26■□□□□ 0.99
RNF139-201ENST00000303545 PAGE5Q96GU1 130 aa21.26■□□□□ 0.99
RNF139-201ENST00000303545 NOL10Q9BSC4 688 aaKnown RBP21.26■□□□□ 0.99
RNF139-201ENST00000303545 THSD7AQ9UPZ6 1657 aa21.26■□□□□ 0.99
RNF139-201ENST00000303545 IL17AQ16552 155 aa21.26■□□□□ 0.99
RNF139-201ENST00000303545 CD209Q9NNX6 404 aa21.26■□□□□ 0.99
RNF139-201ENST00000303545 BAG3O95817 575 aa21.25■□□□□ 0.99
RNF139-201ENST00000303545 SLC35G1Q2M3R5 365 aa21.25■□□□□ 0.99
RNF139-201ENST00000303545 NYAP1Q6ZVC0 841 aa21.25■□□□□ 0.99
RNF139-201ENST00000303545 ZNF444Q8N0Y2 327 aaPredicted RBP21.25■□□□□ 0.99
RNF139-201ENST00000303545 CCDC112Q8NEF3 446 aa21.25■□□□□ 0.99
RNF139-201ENST00000303545 MAST2Q6P0Q8 1798 aa21.25■□□□□ 0.99
RNF139-201ENST00000303545 CD44P16070 742 aaKnown RBP21.25■□□□□ 0.99
RNF139-201ENST00000303545 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.25■□□□□ 0.99
RNF139-201ENST00000303545 V9GYY5 206 aaPredicted RBP21.25■□□□□ 0.99
RNF139-201ENST00000303545 LY75O60449 1722 aa21.25■□□□□ 0.99
RNF139-201ENST00000303545 TOP1P11387 765 aaKnown RBP21.25■□□□□ 0.99
RNF139-201ENST00000303545 KIF5BP33176 963 aa21.25■□□□□ 0.99
RNF139-201ENST00000303545 NT5DC1Q5TFE4 455 aa21.25■□□□□ 0.99
RNF139-201ENST00000303545 RTFDC1Q9BY42 306 aaPredicted RBP21.25■□□□□ 0.99
RNF139-201ENST00000303545 MAD2L2Q9UI95 211 aa21.25■□□□□ 0.99
RNF139-201ENST00000303545 CBFA2T2O43439 604 aa21.24■□□□□ 0.99
RNF139-201ENST00000303545 HEATR3Q7Z4Q2 680 aa21.24■□□□□ 0.99
RNF139-201ENST00000303545 VSTM4Q8IW00 320 aa21.24■□□□□ 0.99
RNF139-201ENST00000303545 PPP1R13BQ96KQ4 1090 aa21.24■□□□□ 0.99
RNF139-201ENST00000303545 ZMYND15Q9H091 742 aa21.24■□□□□ 0.99
RNF139-201ENST00000303545 C6orf229H3BNL8 230 aa21.24■□□□□ 0.99
RNF139-201ENST00000303545 RIMBP2O15034 1052 aa21.24■□□□□ 0.99
RNF139-201ENST00000303545 MLKLQ8NB16 471 aa21.24■□□□□ 0.99
RNF139-201ENST00000303545 POLLQ9UGP5 575 aa21.24■□□□□ 0.99
RNF139-201ENST00000303545 GGA1Q9UJY5 639 aa21.24■□□□□ 0.99
RNF139-201ENST00000303545 F8W031 263 aaPredicted RBP21.23■□□□□ 0.99
RNF139-201ENST00000303545 SLFN14P0C7P3 912 aa21.23■□□□□ 0.99
RNF139-201ENST00000303545 GSTO1P78417 241 aa21.23■□□□□ 0.99
RNF139-201ENST00000303545 ATP2C1P98194 919 aaPredicted RBP21.23■□□□□ 0.99
RNF139-201ENST00000303545 AMOTL1Q8IY63 956 aa21.23■□□□□ 0.99
RNF139-201ENST00000303545 TEX11Q8IYF3 940 aa21.23■□□□□ 0.99
RNF139-201ENST00000303545 CYTH3O43739 400 aa21.23■□□□□ 0.99
RNF139-201ENST00000303545 MFSD14BQ5SR56 506 aa21.23■□□□□ 0.99
RNF139-201ENST00000303545 KANK3Q6NY19 840 aa21.23■□□□□ 0.99
RNF139-201ENST00000303545 FERMT2Q96AC1 680 aa21.23■□□□□ 0.99
RNF139-201ENST00000303545 TMEM47Q9BQJ4 181 aa21.23■□□□□ 0.99
RNF139-201ENST00000303545 RASA1P20936 1047 aa21.22■□□□□ 0.99
RNF139-201ENST00000303545 ST5P78524 1137 aa21.22■□□□□ 0.99
RNF139-201ENST00000303545 BLIDQ8IZY5 108 aa21.22■□□□□ 0.99
RNF139-201ENST00000303545 PAXBP1Q9Y5B6 917 aa21.22■□□□□ 0.99
RNF139-201ENST00000303545 ADKP55263 362 aaKnown RBP21.22■□□□□ 0.99
RNF139-201ENST00000303545 DGKHQ86XP1 1220 aa21.22■□□□□ 0.99
RNF139-201ENST00000303545 ELOA2Q8IYF1 753 aaPredicted RBP21.22■□□□□ 0.99
RNF139-201ENST00000303545 PLIN2Q99541 437 aa21.22■□□□□ 0.99
RNF139-201ENST00000303545 CTIFO43310 598 aaKnown RBP21.21■□□□□ 0.99
RNF139-201ENST00000303545 WWC2Q6AWC2 1192 aa21.21■□□□□ 0.99
RNF139-201ENST00000303545 HOMER1Q86YM7 354 aa21.21■□□□□ 0.99
RNF139-201ENST00000303545 VAT1LQ9HCJ6 419 aa21.21■□□□□ 0.99
RNF139-201ENST00000303545 TRIM37O94972 964 aa21.21■□□□□ 0.99
RNF139-201ENST00000303545 DDR1Q08345 913 aa21.21■□□□□ 0.99
RNF139-201ENST00000303545 PP2D1A8MPX8 630 aa21.2■□□□□ 0.98
RNF139-201ENST00000303545 NCBP1Q09161 790 aaKnown RBP21.2■□□□□ 0.98
RNF139-201ENST00000303545 GRM4Q14833 912 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms