RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 RGS17Q9UGC6 210 aaPredicted RBP22.3■■□□□ 1.16
HOXC4-201ENST00000303406 SWAP70Q9UH65 585 aa22.3■■□□□ 1.16
HOXC4-201ENST00000303406 TOP1P11387 765 aaKnown RBP22.29■■□□□ 1.16
HOXC4-201ENST00000303406 DOK7Q18PE1 504 aa22.29■■□□□ 1.16
HOXC4-201ENST00000303406 SLC4A8Q2Y0W8 1093 aa22.29■■□□□ 1.16
HOXC4-201ENST00000303406 STRIP1Q5VSL9 837 aa22.29■■□□□ 1.16
HOXC4-201ENST00000303406 GALNT17Q6IS24 598 aa22.29■■□□□ 1.16
HOXC4-201ENST00000303406 SARM1Q6SZW1 724 aa22.29■■□□□ 1.16
HOXC4-201ENST00000303406 OLFM4Q6UX06 510 aa22.29■■□□□ 1.16
HOXC4-201ENST00000303406 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.29■■□□□ 1.16
HOXC4-201ENST00000303406 TEKT1Q969V4 418 aa22.29■■□□□ 1.16
HOXC4-201ENST00000303406 FAM13BQ9NYF5 915 aa22.29■■□□□ 1.16
HOXC4-201ENST00000303406 PCDHB6Q9Y5E3 794 aa22.29■■□□□ 1.16
HOXC4-201ENST00000303406 SLX4Q8IY92 1834 aa22.28■■□□□ 1.16
HOXC4-201ENST00000303406 AP5Z1O43299 807 aa22.28■■□□□ 1.16
HOXC4-201ENST00000303406 GRIPAP1Q4V328 841 aa22.28■■□□□ 1.16
HOXC4-201ENST00000303406 TUBE1Q9UJT0 475 aa22.28■■□□□ 1.16
HOXC4-201ENST00000303406 ZNF500O60304 480 aaPredicted RBP22.27■■□□□ 1.16
HOXC4-201ENST00000303406 NLRP12P59046 1061 aa22.27■■□□□ 1.16
HOXC4-201ENST00000303406 EZH2Q15910 746 aaKnown RBP22.27■■□□□ 1.16
HOXC4-201ENST00000303406 C11orf57Q6ZUT1 292 aaPredicted RBP22.27■■□□□ 1.16
HOXC4-201ENST00000303406 DAGLBQ8NCG7 672 aa22.27■■□□□ 1.16
HOXC4-201ENST00000303406 FBXW7Q969H0 707 aa22.27■■□□□ 1.16
HOXC4-201ENST00000303406 CLIC6Q96NY7 704 aa22.27■■□□□ 1.16
HOXC4-201ENST00000303406 SPZ1Q9BXG8 430 aa22.27■■□□□ 1.16
HOXC4-201ENST00000303406 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.27■■□□□ 1.16
HOXC4-201ENST00000303406 KCNH3Q9ULD8 1083 aa22.27■■□□□ 1.16
HOXC4-201ENST00000303406 GOLGA6L6A8MZA4 724 aa22.26■■□□□ 1.15
HOXC4-201ENST00000303406 GOLGA6L19H0YKK7 550 aa22.26■■□□□ 1.15
HOXC4-201ENST00000303406 NLRP5P59047 1200 aa22.26■■□□□ 1.15
HOXC4-201ENST00000303406 ZRSR1Q15695 479 aaKnown RBP22.26■■□□□ 1.15
HOXC4-201ENST00000303406 SUPT20HQ8NEM7 779 aa22.26■■□□□ 1.15
HOXC4-201ENST00000303406 CCDC148Q8NFR7 591 aa22.26■■□□□ 1.15
HOXC4-201ENST00000303406 C7orf43Q8WVR3 580 aa22.26■■□□□ 1.15
HOXC4-201ENST00000303406 FERMT2Q96AC1 680 aa22.26■■□□□ 1.15
HOXC4-201ENST00000303406 ZDHHC15Q96MV8 337 aa22.26■■□□□ 1.15
HOXC4-201ENST00000303406 USP40Q9NVE5 1235 aa22.26■■□□□ 1.15
HOXC4-201ENST00000303406 HOOK1Q9UJC3 728 aaKnown RBP22.26■■□□□ 1.15
HOXC4-201ENST00000303406 hCG_1642624A0A1W2PR95 340 aa22.26■■□□□ 1.15
HOXC4-201ENST00000303406 NPM3O75607 178 aaKnown RBP22.26■■□□□ 1.15
HOXC4-201ENST00000303406 POTEAQ6S8J7 498 aa22.26■■□□□ 1.15
HOXC4-201ENST00000303406 KRBA2Q6ZNG9 492 aa22.26■■□□□ 1.15
HOXC4-201ENST00000303406 PLA2G4DQ86XP0 818 aa22.26■■□□□ 1.15
HOXC4-201ENST00000303406 OSBPL5Q9H0X9 879 aaPredicted RBP22.26■■□□□ 1.15
HOXC4-201ENST00000303406 EHD4Q9H223 541 aa22.26■■□□□ 1.15
HOXC4-201ENST00000303406 STX8Q9UNK0 236 aa22.26■■□□□ 1.15
HOXC4-201ENST00000303406 IGKV6D-41A0A0C4DH26 115 aa22.25■■□□□ 1.15
HOXC4-201ENST00000303406 CDC25BP30305 580 aa22.25■■□□□ 1.15
HOXC4-201ENST00000303406 PPP4R3BQ5MIZ7 849 aa22.25■■□□□ 1.15
HOXC4-201ENST00000303406 APOBEC3HQ6NTF7 200 aaKnown RBP22.25■■□□□ 1.15
HOXC4-201ENST00000303406 STAG2Q8N3U4 1231 aa22.25■■□□□ 1.15
HOXC4-201ENST00000303406 CRKP46108 304 aa22.24■■□□□ 1.15
HOXC4-201ENST00000303406 TTC38Q5R3I4 469 aa22.24■■□□□ 1.15
HOXC4-201ENST00000303406 DACT2Q5SW24 774 aa22.24■■□□□ 1.15
HOXC4-201ENST00000303406 CDC42EP5Q6NZY7 148 aa22.24■■□□□ 1.15
HOXC4-201ENST00000303406 PCDHA4Q9UN74 947 aa22.24■■□□□ 1.15
HOXC4-201ENST00000303406 MYH8P13535 1937 aa22.24■■□□□ 1.15
HOXC4-201ENST00000303406 GREB1LQ9C091 1923 aaPredicted RBP22.23■■□□□ 1.15
HOXC4-201ENST00000303406 BECN2A8MW95 431 aa22.23■■□□□ 1.15
HOXC4-201ENST00000303406 F8W031 263 aaPredicted RBP22.23■■□□□ 1.15
HOXC4-201ENST00000303406 HLA-DOAP06340 250 aa22.23■■□□□ 1.15
HOXC4-201ENST00000303406 PARP1P09874 1014 aaKnown RBP22.23■■□□□ 1.15
HOXC4-201ENST00000303406 ZNF75DP51815 510 aa22.23■■□□□ 1.15
HOXC4-201ENST00000303406 EN1Q05925 392 aaPredicted RBP22.23■■□□□ 1.15
HOXC4-201ENST00000303406 EARS2Q5JPH6 523 aaKnown RBP22.23■■□□□ 1.15
HOXC4-201ENST00000303406 KANK3Q6NY19 840 aa22.23■■□□□ 1.15
HOXC4-201ENST00000303406 DHX40Q8IX18 779 aaKnown RBP22.23■■□□□ 1.15
HOXC4-201ENST00000303406 BLIDQ8IZY5 108 aa22.23■■□□□ 1.15
HOXC4-201ENST00000303406 CEP95Q96GE4 821 aa22.23■■□□□ 1.15
HOXC4-201ENST00000303406 DDX4Q9NQI0 724 aaKnown RBP22.23■■□□□ 1.15
HOXC4-201ENST00000303406 ECE2O60344 883 aa22.22■■□□□ 1.15
HOXC4-201ENST00000303406 ATP2C1P98194 919 aaPredicted RBP22.22■■□□□ 1.15
HOXC4-201ENST00000303406 PLCB2Q00722 1185 aa22.22■■□□□ 1.15
HOXC4-201ENST00000303406 KIAA2012Q0VF49 1180 aa22.22■■□□□ 1.15
HOXC4-201ENST00000303406 CNNM3Q8NE01 707 aa22.22■■□□□ 1.15
HOXC4-201ENST00000303406 DBNDD1Q9H9R9 158 aa22.22■■□□□ 1.15
HOXC4-201ENST00000303406 BARHL2Q9NY43 387 aa22.22■■□□□ 1.15
HOXC4-201ENST00000303406 SERPINB13Q9UIV8 391 aa22.22■■□□□ 1.15
HOXC4-201ENST00000303406 ADAMTSL1Q8N6G6 1762 aa22.22■■□□□ 1.15
HOXC4-201ENST00000303406 FAM205CA6NFA0 338 aa22.21■■□□□ 1.15
HOXC4-201ENST00000303406 hCG_1984214I3L0E3 225 aa22.21■■□□□ 1.15
HOXC4-201ENST00000303406 M0R2N6 131 aa22.21■■□□□ 1.15
HOXC4-201ENST00000303406 PICALMQ13492 652 aa22.21■■□□□ 1.15
HOXC4-201ENST00000303406 SLC35G1Q2M3R5 365 aa22.21■■□□□ 1.15
HOXC4-201ENST00000303406 ZNF713Q8N859 430 aaPredicted RBP22.21■■□□□ 1.15
HOXC4-201ENST00000303406 CCDC12Q8WUD4 166 aaPredicted RBP22.21■■□□□ 1.15
HOXC4-201ENST00000303406 MTMR4Q9NYA4 1195 aa22.21■■□□□ 1.15
HOXC4-201ENST00000303406 KLRF2D3W0D1 207 aa22.21■■□□□ 1.15
HOXC4-201ENST00000303406 CYTH3O43739 400 aa22.21■■□□□ 1.15
HOXC4-201ENST00000303406 LONRF3Q496Y0 759 aa22.21■■□□□ 1.15
HOXC4-201ENST00000303406 CCDC34Q96HJ3 373 aa22.21■■□□□ 1.15
HOXC4-201ENST00000303406 MRFAP1L1Q96HT8 127 aa22.21■■□□□ 1.15
HOXC4-201ENST00000303406 MXD3Q9BW11 206 aa22.21■■□□□ 1.15
HOXC4-201ENST00000303406 IDI2Q9BXS1 227 aa22.21■■□□□ 1.15
HOXC4-201ENST00000303406 DHX36Q9H2U1 1008 aaKnown RBP22.21■■□□□ 1.15
HOXC4-201ENST00000303406 SERPINA10Q9UK55 444 aa22.21■■□□□ 1.15
HOXC4-201ENST00000303406 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.21■■□□□ 1.15
HOXC4-201ENST00000303406 PSME4Q14997 1843 aa22.2■■□□□ 1.14
HOXC4-201ENST00000303406 SMTNL1A8MU46 457 aa22.2■■□□□ 1.14
HOXC4-201ENST00000303406 STXBP3O00186 592 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms