RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 USP17L18D6R9N7 530 aa13.48□□□□□ -0.25
CLCC1-201ENST00000302500 USP17L22D6RA61 530 aa13.48□□□□□ -0.25
CLCC1-201ENST00000302500 USP17L17D6RBQ6 530 aa13.48□□□□□ -0.25
CLCC1-201ENST00000302500 USP17L19D6RCP7 530 aa13.48□□□□□ -0.25
CLCC1-201ENST00000302500 USP17L20D6RJB6 530 aa13.48□□□□□ -0.25
CLCC1-201ENST00000302500 FLT3LGP49771 235 aa13.48□□□□□ -0.25
CLCC1-201ENST00000302500 FCGRTP55899 365 aa13.48□□□□□ -0.25
CLCC1-201ENST00000302500 ERVK-9P63128 1117 aa13.48□□□□□ -0.25
CLCC1-201ENST00000302500 ERVK-24P63145 666 aa13.48□□□□□ -0.25
CLCC1-201ENST00000302500 USP17L24Q0WX57 530 aa13.48□□□□□ -0.25
CLCC1-201ENST00000302500 MTFR1Q15390 333 aa13.48□□□□□ -0.25
CLCC1-201ENST00000302500 MKL1Q969V6 931 aa13.48□□□□□ -0.25
CLCC1-201ENST00000302500 VCPKMTQ9H867 229 aa13.48□□□□□ -0.25
CLCC1-201ENST00000302500 TMOD4Q9NZQ9 345 aa13.48□□□□□ -0.25
CLCC1-201ENST00000302500 ALPK3Q96L96 1907 aa13.48□□□□□ -0.25
CLCC1-201ENST00000302500 EEF2P13639 858 aaKnown RBP13.47□□□□□ -0.25
CLCC1-201ENST00000302500 ICA1Q05084 483 aa13.47□□□□□ -0.25
CLCC1-201ENST00000302500 NMIQ13287 307 aaPredicted RBP13.47□□□□□ -0.25
CLCC1-201ENST00000302500 ZYXQ15942 572 aaKnown RBP13.47□□□□□ -0.25
CLCC1-201ENST00000302500 MORN1Q5T089 497 aa13.47□□□□□ -0.25
CLCC1-201ENST00000302500 REPS2Q8NFH8 660 aa13.47□□□□□ -0.25
CLCC1-201ENST00000302500 PXYLP1Q8TE99 480 aa13.47□□□□□ -0.25
CLCC1-201ENST00000302500 LPAR1Q92633 364 aa13.47□□□□□ -0.25
CLCC1-201ENST00000302500 RPAP3Q9H6T3 665 aaPredicted RBP13.47□□□□□ -0.25
CLCC1-201ENST00000302500 CABP5Q9NP86 173 aa13.47□□□□□ -0.25
CLCC1-201ENST00000302500 SMCHD1A6NHR9 2005 aa13.46□□□□□ -0.25
CLCC1-201ENST00000302500 HSPD1P10809 573 aaKnown RBP13.46□□□□□ -0.25
CLCC1-201ENST00000302500 SDSP20132 328 aa13.46□□□□□ -0.25
CLCC1-201ENST00000302500 PPARAQ07869 468 aa13.46□□□□□ -0.25
CLCC1-201ENST00000302500 KIF22Q14807 665 aa13.46□□□□□ -0.25
CLCC1-201ENST00000302500 ARHGEF6Q15052 776 aa13.46□□□□□ -0.25
CLCC1-201ENST00000302500 LRRFIP1Q32MZ4 808 aaKnown RBP13.46□□□□□ -0.25
CLCC1-201ENST00000302500 SLC9C1Q4G0N8 1177 aa13.46□□□□□ -0.25
CLCC1-201ENST00000302500 MAP3K21Q5TCX8 1036 aa13.46□□□□□ -0.25
CLCC1-201ENST00000302500 KANSL2Q9H9L4 492 aa13.46□□□□□ -0.25
CLCC1-201ENST00000302500 INCENPQ9NQS7 918 aa13.46□□□□□ -0.25
CLCC1-201ENST00000302500 IL17RBQ9NRM6 502 aa13.46□□□□□ -0.25
CLCC1-201ENST00000302500 NYAP2Q9P242 653 aa13.46□□□□□ -0.25
CLCC1-201ENST00000302500 RABGAP1Q9Y3P9 1069 aa13.46□□□□□ -0.25
CLCC1-201ENST00000302500 LCTP09848 1927 aa13.45□□□□□ -0.26
CLCC1-201ENST00000302500 PLXNA1Q9UIW2 1896 aa13.45□□□□□ -0.26
CLCC1-201ENST00000302500 PRDM1O75626 825 aa13.45□□□□□ -0.26
CLCC1-201ENST00000302500 ECM2O94769 699 aaPredicted RBP13.45□□□□□ -0.26
CLCC1-201ENST00000302500 FMNL1O95466 1100 aaPredicted RBP13.45□□□□□ -0.26
CLCC1-201ENST00000302500 FGAP02671 866 aa13.45□□□□□ -0.26
CLCC1-201ENST00000302500 GRK4P32298 578 aa13.45□□□□□ -0.26
CLCC1-201ENST00000302500 IRX3P78415 501 aaPredicted RBP13.45□□□□□ -0.26
CLCC1-201ENST00000302500 MCMDC2Q4G0Z9 681 aa13.45□□□□□ -0.26
CLCC1-201ENST00000302500 NEDD1Q8NHV4 660 aa13.45□□□□□ -0.26
CLCC1-201ENST00000302500 GTF3C2Q8WUA4 911 aaPredicted RBP13.45□□□□□ -0.26
CLCC1-201ENST00000302500 CEP95Q96GE4 821 aa13.45□□□□□ -0.26
CLCC1-201ENST00000302500 PAK6Q9NQU5 681 aaPredicted RBP13.45□□□□□ -0.26
CLCC1-201ENST00000302500 MTMR4Q9NYA4 1195 aa13.45□□□□□ -0.26
CLCC1-201ENST00000302500 SYNPO2Q9UMS6 1093 aa13.45□□□□□ -0.26
CLCC1-201ENST00000302500 CEP290O15078 2479 aa13.45□□□□□ -0.26
CLCC1-201ENST00000302500 CCDC171Q6TFL3 1326 aa13.44□□□□□ -0.26
CLCC1-201ENST00000302500 MINDY4BA8MYZ0 360 aa13.44□□□□□ -0.26
CLCC1-201ENST00000302500 MPHOSPH10O00566 681 aaKnown RBP13.44□□□□□ -0.26
CLCC1-201ENST00000302500 TNPO2O14787 897 aaKnown RBP13.44□□□□□ -0.26
CLCC1-201ENST00000302500 WDR46O15213 610 aaKnown RBP13.44□□□□□ -0.26
CLCC1-201ENST00000302500 ORC4O43929 436 aa13.44□□□□□ -0.26
CLCC1-201ENST00000302500 ELNP15502 786 aa13.44□□□□□ -0.26
CLCC1-201ENST00000302500 EN2P19622 333 aaPredicted RBP13.44□□□□□ -0.26
CLCC1-201ENST00000302500 DSG3P32926 999 aa13.44□□□□□ -0.26
CLCC1-201ENST00000302500 TDO2P48775 406 aa13.44□□□□□ -0.26
CLCC1-201ENST00000302500 MLLT1Q03111 559 aaPredicted RBP13.44□□□□□ -0.26
CLCC1-201ENST00000302500 SLAIN1Q8ND83 568 aa13.44□□□□□ -0.26
CLCC1-201ENST00000302500 GPRC5AQ8NFJ5 357 aa13.44□□□□□ -0.26
CLCC1-201ENST00000302500 TRIB2Q92519 343 aa13.44□□□□□ -0.26
CLCC1-201ENST00000302500 FEZ1Q99689 392 aa13.44□□□□□ -0.26
CLCC1-201ENST00000302500 FBXO28Q9NVF7 368 aa13.44□□□□□ -0.26
CLCC1-201ENST00000302500 SZT2Q5T011 3432 aa13.44□□□□□ -0.26
CLCC1-201ENST00000302500 ADCY3O60266 1144 aa13.43□□□□□ -0.26
CLCC1-201ENST00000302500 HOXC6P09630 235 aa13.43□□□□□ -0.26
CLCC1-201ENST00000302500 XRCC5P13010 732 aaKnown RBP13.43□□□□□ -0.26
CLCC1-201ENST00000302500 HOXD10P28358 340 aa13.43□□□□□ -0.26
CLCC1-201ENST00000302500 TRIM32Q13049 653 aa13.43□□□□□ -0.26
CLCC1-201ENST00000302500 COG2Q14746 738 aa13.43□□□□□ -0.26
CLCC1-201ENST00000302500 TTC22Q5TAA0 569 aa13.43□□□□□ -0.26
CLCC1-201ENST00000302500 GPR142Q7Z601 462 aa13.43□□□□□ -0.26
CLCC1-201ENST00000302500 POTEDQ86YR6 584 aa13.43□□□□□ -0.26
CLCC1-201ENST00000302500 SPICE1Q8N0Z3 855 aa13.43□□□□□ -0.26
CLCC1-201ENST00000302500 ZNF214Q9UL59 606 aaPredicted RBP13.43□□□□□ -0.26
CLCC1-201ENST00000302500 NDUFB10O96000 172 aa13.42□□□□□ -0.26
CLCC1-201ENST00000302500 MNX1P50219 401 aaPredicted RBP13.42□□□□□ -0.26
CLCC1-201ENST00000302500 CTDSPL2Q05D32 466 aa13.42□□□□□ -0.26
CLCC1-201ENST00000302500 GRB14Q14449 540 aa13.42□□□□□ -0.26
CLCC1-201ENST00000302500 TBC1D10CQ8IV04 446 aa13.42□□□□□ -0.26
CLCC1-201ENST00000302500 ATG4CQ96DT6 458 aa13.42□□□□□ -0.26
CLCC1-201ENST00000302500 DDRGK1Q96HY6 314 aa13.42□□□□□ -0.26
CLCC1-201ENST00000302500 MOV10L1Q9BXT6 1211 aaKnown RBP13.42□□□□□ -0.26
CLCC1-201ENST00000302500 CRISPLD2Q9H0B8 497 aa13.42□□□□□ -0.26
CLCC1-201ENST00000302500 NAPBQ9H115 298 aa13.42□□□□□ -0.26
CLCC1-201ENST00000302500 ARHGEF10LQ9HCE6 1279 aa13.42□□□□□ -0.26
CLCC1-201ENST00000302500 F5H6K3 240 aa13.41□□□□□ -0.26
CLCC1-201ENST00000302500 INHAP05111 366 aa13.41□□□□□ -0.26
CLCC1-201ENST00000302500 GJB1P08034 283 aa13.41□□□□□ -0.26
CLCC1-201ENST00000302500 CCL5P13501 91 aa13.41□□□□□ -0.26
CLCC1-201ENST00000302500 MAPK4P31152 587 aa13.41□□□□□ -0.26
CLCC1-201ENST00000302500 GJA8P48165 433 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms