RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 SHROOM1Q2M3G4 852 aaPredicted RBP15.06■□□□□ 0
CCDC7-202ENST00000302316 C9orf131Q5VYM1 1079 aa15.06■□□□□ 0
CCDC7-202ENST00000302316 FAM173BQ6P4H8 233 aa15.06■□□□□ 0
CCDC7-202ENST00000302316 TMEM179Q6ZVK1 233 aa15.06■□□□□ 0
CCDC7-202ENST00000302316 RASGRP2Q7LDG7 609 aa15.06■□□□□ 0
CCDC7-202ENST00000302316 RGS22Q8NE09 1264 aa15.06■□□□□ 0
CCDC7-202ENST00000302316 RTN4Q9NQC3 1192 aaKnown RBP15.06■□□□□ 0
CCDC7-202ENST00000302316 MAD2L2Q9UI95 211 aa15.06■□□□□ 0
CCDC7-202ENST00000302316 HACL1Q9UJ83 578 aa15.06■□□□□ 0
CCDC7-202ENST00000302316 SCAF8Q9UPN6 1271 aaKnown RBP15.06■□□□□ 0
CCDC7-202ENST00000302316 PRPF3O43395 683 aaKnown RBP15.05■□□□□ 0
CCDC7-202ENST00000302316 KRT40Q6A162 431 aa15.05■□□□□ 0
CCDC7-202ENST00000302316 STAG2Q8N3U4 1231 aa15.05■□□□□ 0
CCDC7-202ENST00000302316 TRPM4Q8TD43 1214 aa15.05■□□□□ 0
CCDC7-202ENST00000302316 GDPD2Q9HCC8 539 aa15.05■□□□□ 0
CCDC7-202ENST00000302316 FIBPO43427 364 aa15.05■□□□□ -0
CCDC7-202ENST00000302316 PRPF40AO75400 957 aaKnown RBP15.05■□□□□ -0
CCDC7-202ENST00000302316 PARP1P09874 1014 aaKnown RBP15.05■□□□□ -0
CCDC7-202ENST00000302316 GPR162Q16538 588 aa15.05■□□□□ -0
CCDC7-202ENST00000302316 KANSL2Q9H9L4 492 aa15.05■□□□□ -0
CCDC7-202ENST00000302316 CABP5Q9NP86 173 aa15.05■□□□□ -0
CCDC7-202ENST00000302316 LMBRD1Q9NUN5 540 aa15.05■□□□□ -0
CCDC7-202ENST00000302316 V9GY48 417 aaPredicted RBP15.05■□□□□ -0
CCDC7-202ENST00000302316 hCG_1642624A0A1W2PR95 340 aa15.04■□□□□ -0
CCDC7-202ENST00000302316 PALM3A6NDB9 673 aaPredicted RBP15.04■□□□□ -0
CCDC7-202ENST00000302316 TRAK2O60296 914 aa15.04■□□□□ -0
CCDC7-202ENST00000302316 DDNO94850 711 aaPredicted RBP15.04■□□□□ -0
CCDC7-202ENST00000302316 GH2P01242 217 aa15.04■□□□□ -0
CCDC7-202ENST00000302316 KRT85P78386 507 aa15.04■□□□□ -0
CCDC7-202ENST00000302316 ICA1Q05084 483 aa15.04■□□□□ -0
CCDC7-202ENST00000302316 SEPT2Q15019 361 aa15.04■□□□□ -0
CCDC7-202ENST00000302316 PGAP2Q9UHJ9 254 aa15.04■□□□□ -0
CCDC7-202ENST00000302316 MYH6P13533 1939 aa15.04■□□□□ -0
CCDC7-202ENST00000302316 TBC1D12O60347 775 aa15.04■□□□□ -0
CCDC7-202ENST00000302316 GOLGA8HP0CJ92 632 aa15.04■□□□□ -0
CCDC7-202ENST00000302316 PDHBP11177 359 aa15.04■□□□□ -0
CCDC7-202ENST00000302316 RRP1BQ14684 758 aaKnown RBP15.04■□□□□ -0
CCDC7-202ENST00000302316 USP17L2Q6R6M4 530 aa15.04■□□□□ -0
CCDC7-202ENST00000302316 MIGA2Q7L4E1 593 aa15.04■□□□□ -0
CCDC7-202ENST00000302316 LZTS2Q9BRK4 669 aa15.04■□□□□ -0
CCDC7-202ENST00000302316 USP17L5A8MUK1 530 aa15.03■□□□□ -0
CCDC7-202ENST00000302316 EEF2P13639 858 aaKnown RBP15.03■□□□□ -0
CCDC7-202ENST00000302316 XBP1P17861 261 aa15.03■□□□□ -0
CCDC7-202ENST00000302316 LMOD1P29536 600 aaPredicted RBP15.03■□□□□ -0
CCDC7-202ENST00000302316 EPS15P42566 896 aa15.03■□□□□ -0
CCDC7-202ENST00000302316 KIF23Q02241 960 aaPredicted RBP15.03■□□□□ -0
CCDC7-202ENST00000302316 PKN1Q16512 942 aa15.03■□□□□ -0
CCDC7-202ENST00000302316 PIBF1Q8WXW3 757 aa15.03■□□□□ -0
CCDC7-202ENST00000302316 NYAP2Q9P242 653 aa15.03■□□□□ -0
CCDC7-202ENST00000302316 RBM27Q9P2N5 1060 aaKnown RBP15.03■□□□□ -0
CCDC7-202ENST00000302316 MYH4Q9Y623 1939 aa15.03■□□□□ -0
CCDC7-202ENST00000302316 KLRF2D3W0D1 207 aa15.02■□□□□ -0
CCDC7-202ENST00000302316 GNL2Q13823 731 aaKnown RBP15.02■□□□□ -0
CCDC7-202ENST00000302316 CSPP1Q1MSJ5 1256 aa15.02■□□□□ -0
CCDC7-202ENST00000302316 ANGEL2Q5VTE6 544 aaKnown RBP15.02■□□□□ -0
CCDC7-202ENST00000302316 USP48Q86UV5 1035 aa15.02■□□□□ -0
CCDC7-202ENST00000302316 APOBEC3FQ8IUX4 373 aaKnown RBP15.02■□□□□ -0
CCDC7-202ENST00000302316 TEPSINQ96N21 525 aa15.02■□□□□ -0
CCDC7-202ENST00000302316 DEFB129Q9H1M3 183 aa15.02■□□□□ -0
CCDC7-202ENST00000302316 KIF28PB7ZC32 967 aa15.02□□□□□ -0.01
CCDC7-202ENST00000302316 MMP1P03956 469 aa15.02□□□□□ -0.01
CCDC7-202ENST00000302316 JAG1P78504 1218 aa15.02□□□□□ -0.01
CCDC7-202ENST00000302316 SKOR2Q2VWA4 1001 aaPredicted RBP15.02□□□□□ -0.01
CCDC7-202ENST00000302316 ASPRV1Q53RT3 343 aa15.02□□□□□ -0.01
CCDC7-202ENST00000302316 BRAPQ7Z569 592 aa15.02□□□□□ -0.01
CCDC7-202ENST00000302316 TMEM87AQ8NBN3 555 aa15.02□□□□□ -0.01
CCDC7-202ENST00000302316 VPS54Q9P1Q0 977 aa15.02□□□□□ -0.01
CCDC7-202ENST00000302316 KCNJ14Q9UNX9 436 aa15.02□□□□□ -0.01
CCDC7-202ENST00000302316 TCHHQ07283 1943 aa15.02□□□□□ -0.01
CCDC7-202ENST00000302316 FRMPD2Q68DX3 1309 aaPredicted RBP15.02□□□□□ -0.01
CCDC7-202ENST00000302316 MYH15Q9Y2K3 1946 aa15.01□□□□□ -0.01
CCDC7-202ENST00000302316 SNHG28P0DPA3 235 aa15.01□□□□□ -0.01
CCDC7-202ENST00000302316 SCG2P13521 617 aa15.01□□□□□ -0.01
CCDC7-202ENST00000302316 SAFBQ15424 915 aaKnown RBP eCLIP15.01□□□□□ -0.01
CCDC7-202ENST00000302316 GGA3Q9NZ52 723 aa15.01□□□□□ -0.01
CCDC7-202ENST00000302316 ZBTB21Q9ULJ3 1066 aa15.01□□□□□ -0.01
CCDC7-202ENST00000302316 DDX49Q9Y6V7 483 aaKnown RBP15.01□□□□□ -0.01
CCDC7-202ENST00000302316 CYTH3O43739 400 aa15.01□□□□□ -0.01
CCDC7-202ENST00000302316 RAD21O60216 631 aa15.01□□□□□ -0.01
CCDC7-202ENST00000302316 PFKFB3Q16875 520 aaPredicted RBP15.01□□□□□ -0.01
CCDC7-202ENST00000302316 MKL1Q969V6 931 aa15.01□□□□□ -0.01
CCDC7-202ENST00000302316 SPZ1Q9BXG8 430 aa15.01□□□□□ -0.01
CCDC7-202ENST00000302316 TFIP11Q9UBB9 837 aaKnown RBP15.01□□□□□ -0.01
CCDC7-202ENST00000302316 MAP3K10Q02779 954 aa15□□□□□ -0.01
CCDC7-202ENST00000302316 ZNF543Q08ER8 600 aa15□□□□□ -0.01
CCDC7-202ENST00000302316 CCDC96Q2M329 555 aa15□□□□□ -0.01
CCDC7-202ENST00000302316 SLC35G1Q2M3R5 365 aa15□□□□□ -0.01
CCDC7-202ENST00000302316 DIS3L2Q8IYB7 885 aaKnown RBP15□□□□□ -0.01
CCDC7-202ENST00000302316 ZNF396Q96N95 335 aaPredicted RBP15□□□□□ -0.01
CCDC7-202ENST00000302316 SCAND2PQ9GZW5 306 aaPredicted RBP15□□□□□ -0.01
CCDC7-202ENST00000302316 CPVLQ9H3G5 476 aa15□□□□□ -0.01
CCDC7-202ENST00000302316 ADARB2Q9NS39 739 aaKnown RBP15□□□□□ -0.01
CCDC7-202ENST00000302316 GRIN3BO60391 1043 aa14.99□□□□□ -0.01
CCDC7-202ENST00000302316 CAP2P40123 477 aa14.99□□□□□ -0.01
CCDC7-202ENST00000302316 HIRAP54198 1017 aaPredicted RBP14.99□□□□□ -0.01
CCDC7-202ENST00000302316 SIAH1Q8IUQ4 282 aa14.99□□□□□ -0.01
CCDC7-202ENST00000302316 SPATA32Q96LK8 384 aa14.99□□□□□ -0.01
CCDC7-202ENST00000302316 CFAP45Q9UL16 551 aa14.99□□□□□ -0.01
CCDC7-202ENST00000302316 ISY1Q9ULR0 285 aaKnown RBP14.99□□□□□ -0.01
CCDC7-202ENST00000302316 MYSM1Q5VVJ2 828 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms