RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 GNL2Q13823 731 aaKnown RBP13.86□□□□□ -0.19
TPM3-202ENST00000302206 ANO1Q5XXA6 986 aa13.86□□□□□ -0.19
TPM3-202ENST00000302206 SLC44A5Q8NCS7 719 aa13.86□□□□□ -0.19
TPM3-202ENST00000302206 TSPY26PQ9H489 355 aa13.86□□□□□ -0.19
TPM3-202ENST00000302206 PRDM10Q9NQV6 1147 aa13.86□□□□□ -0.19
TPM3-202ENST00000302206 SERPINB13Q9UIV8 391 aa13.86□□□□□ -0.19
TPM3-202ENST00000302206 MORC2Q9Y6X9 1032 aaPredicted RBP13.86□□□□□ -0.19
TPM3-202ENST00000302206 IGKV6D-41A0A0C4DH26 115 aa13.85□□□□□ -0.19
TPM3-202ENST00000302206 YDJCA8MPS7 323 aa13.85□□□□□ -0.19
TPM3-202ENST00000302206 LIG1P18858 919 aa13.85□□□□□ -0.19
TPM3-202ENST00000302206 SMARCA1P28370 1054 aa13.85□□□□□ -0.19
TPM3-202ENST00000302206 SLC39A14Q15043 492 aa13.85□□□□□ -0.19
TPM3-202ENST00000302206 STK38Q15208 465 aa13.85□□□□□ -0.19
TPM3-202ENST00000302206 SLC4A8Q2Y0W8 1093 aa13.85□□□□□ -0.19
TPM3-202ENST00000302206 ADALQ6DHV7 355 aa13.85□□□□□ -0.19
TPM3-202ENST00000302206 RSBN1LQ6PCB5 846 aaPredicted RBP13.85□□□□□ -0.19
TPM3-202ENST00000302206 KIAA0825Q8IV33 1275 aa13.85□□□□□ -0.19
TPM3-202ENST00000302206 NOSTRINQ8IVI9 506 aa13.85□□□□□ -0.19
TPM3-202ENST00000302206 SRBD1Q8N5C6 995 aaKnown RBP13.85□□□□□ -0.19
TPM3-202ENST00000302206 BICD2Q8TD16 824 aa13.85□□□□□ -0.19
TPM3-202ENST00000302206 CCDC17Q96LX7 622 aa13.85□□□□□ -0.19
TPM3-202ENST00000302206 TMEM47Q9BQJ4 181 aa13.85□□□□□ -0.19
TPM3-202ENST00000302206 SH3GLB2Q9NR46 395 aa13.85□□□□□ -0.19
TPM3-202ENST00000302206 CREBZFQ9NS37 354 aa13.85□□□□□ -0.19
TPM3-202ENST00000302206 V9GY48 417 aaPredicted RBP13.85□□□□□ -0.19
TPM3-202ENST00000302206 PALM3A6NDB9 673 aaPredicted RBP13.84□□□□□ -0.19
TPM3-202ENST00000302206 SPTLC2O15270 562 aa13.84□□□□□ -0.19
TPM3-202ENST00000302206 PPP6R2O75170 966 aa13.84□□□□□ -0.19
TPM3-202ENST00000302206 ENTPD3O75355 529 aa13.84□□□□□ -0.19
TPM3-202ENST00000302206 VIL1P09327 827 aaKnown RBP13.84□□□□□ -0.19
TPM3-202ENST00000302206 MMP14P50281 582 aa13.84□□□□□ -0.19
TPM3-202ENST00000302206 PICALMQ13492 652 aa13.84□□□□□ -0.19
TPM3-202ENST00000302206 PFKFB3Q16875 520 aaPredicted RBP13.84□□□□□ -0.19
TPM3-202ENST00000302206 DPY19L2Q6NUT2 758 aa13.84□□□□□ -0.19
TPM3-202ENST00000302206 RBM43Q6ZSC3 357 aaKnown RBP13.84□□□□□ -0.19
TPM3-202ENST00000302206 DIS3L2Q8IYB7 885 aaKnown RBP13.84□□□□□ -0.19
TPM3-202ENST00000302206 GMLQ99445 158 aa13.84□□□□□ -0.19
TPM3-202ENST00000302206 PHF20Q9BVI0 1012 aa13.84□□□□□ -0.19
TPM3-202ENST00000302206 NUP62CLQ9H1M0 184 aa13.84□□□□□ -0.19
TPM3-202ENST00000302206 CLSTN2Q9H4D0 955 aa13.84□□□□□ -0.19
TPM3-202ENST00000302206 PCDH10Q9P2E7 1040 aa13.84□□□□□ -0.19
TPM3-202ENST00000302206 CLIC4Q9Y696 253 aa13.84□□□□□ -0.19
TPM3-202ENST00000302206 GREB1LQ9C091 1923 aaPredicted RBP13.84□□□□□ -0.19
TPM3-202ENST00000302206 UBE2Q2LH0YL09 131 aa13.83□□□□□ -0.2
TPM3-202ENST00000302206 CTAGE5O15320 804 aa13.83□□□□□ -0.2
TPM3-202ENST00000302206 FOXN1O15353 648 aa13.83□□□□□ -0.2
TPM3-202ENST00000302206 SCG2P13521 617 aa13.83□□□□□ -0.2
TPM3-202ENST00000302206 ME1P48163 572 aa13.83□□□□□ -0.2
TPM3-202ENST00000302206 CEBPZQ03701 1054 aaKnown RBP13.83□□□□□ -0.2
TPM3-202ENST00000302206 SF3A1Q15459 793 aaKnown RBP13.83□□□□□ -0.2
TPM3-202ENST00000302206 RILPL1Q5EBL4 403 aa13.83□□□□□ -0.2
TPM3-202ENST00000302206 CMTR1Q8N1G2 835 aaKnown RBP13.83□□□□□ -0.2
TPM3-202ENST00000302206 LARGE2Q8N3Y3 721 aa13.83□□□□□ -0.2
TPM3-202ENST00000302206 CCDC82Q8N4S0 544 aa13.83□□□□□ -0.2
TPM3-202ENST00000302206 FTOQ9C0B1 505 aaKnown RBP eCLIP13.83□□□□□ -0.27e-6■■□□□ 12.9
TPM3-202ENST00000302206 BRMS1Q9HCU9 246 aa13.83□□□□□ -0.2
TPM3-202ENST00000302206 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.83□□□□□ -0.2
TPM3-202ENST00000302206 MAD2L2Q9UI95 211 aa13.83□□□□□ -0.2
TPM3-202ENST00000302206 PCDHA7Q9UN72 937 aa13.83□□□□□ -0.2
TPM3-202ENST00000302206 ATRNL1Q5VV63 1379 aa13.83□□□□□ -0.2
TPM3-202ENST00000302206 MYH8P13535 1937 aa13.82□□□□□ -0.2
TPM3-202ENST00000302206 BTBD18B2RXH4 712 aa13.82□□□□□ -0.2
TPM3-202ENST00000302206 SHMT1P34896 483 aa13.82□□□□□ -0.2
TPM3-202ENST00000302206 KRT2P35908 639 aa13.82□□□□□ -0.2
TPM3-202ENST00000302206 CTCFP49711 727 aaPredicted RBP13.82□□□□□ -0.2
TPM3-202ENST00000302206 VASPP50552 380 aaPredicted RBP13.82□□□□□ -0.2
TPM3-202ENST00000302206 RBM5P52756 815 aaKnown RBP eCLIP13.82□□□□□ -0.2
TPM3-202ENST00000302206 FAM160A1Q05DH4 1040 aa13.82□□□□□ -0.2
TPM3-202ENST00000302206 PTPAQ15257 358 aa13.82□□□□□ -0.2
TPM3-202ENST00000302206 MAP3K11Q16584 847 aa13.82□□□□□ -0.2
TPM3-202ENST00000302206 CCDC73Q6ZRK6 1079 aa13.82□□□□□ -0.2
TPM3-202ENST00000302206 METTL16Q86W50 562 aaKnown RBP13.82□□□□□ -0.2
TPM3-202ENST00000302206 FOXP4Q8IVH2 680 aaPredicted RBP13.82□□□□□ -0.2
TPM3-202ENST00000302206 CCAR1Q8IX12 1150 aaKnown RBP13.82□□□□□ -0.2
TPM3-202ENST00000302206 NIM1KQ8IY84 436 aa13.82□□□□□ -0.2
TPM3-202ENST00000302206 AGBL3Q8NEM8 1001 aa13.82□□□□□ -0.2
TPM3-202ENST00000302206 MRPS27Q92552 414 aaKnown RBP13.82□□□□□ -0.2
TPM3-202ENST00000302206 CEP95Q96GE4 821 aa13.82□□□□□ -0.2
TPM3-202ENST00000302206 FUCA2Q9BTY2 467 aa13.82□□□□□ -0.2
TPM3-202ENST00000302206 SPZ1Q9BXG8 430 aa13.82□□□□□ -0.2
TPM3-202ENST00000302206 RBSNQ9H1K0 784 aa13.82□□□□□ -0.2
TPM3-202ENST00000302206 MTMR4Q9NYA4 1195 aa13.82□□□□□ -0.2
TPM3-202ENST00000302206 DACT1Q9NYF0 836 aa13.82□□□□□ -0.2
TPM3-202ENST00000302206 PI4KBQ9UBF8 816 aa13.82□□□□□ -0.2
TPM3-202ENST00000302206 FAM198AQ9UFP1 575 aa13.82□□□□□ -0.2
TPM3-202ENST00000302206 HDAC9Q9UKV0 1011 aa13.82□□□□□ -0.2
TPM3-202ENST00000302206 ZNRF3Q9ULT6 936 aa13.82□□□□□ -0.2
TPM3-202ENST00000302206 STX8Q9UNK0 236 aa13.82□□□□□ -0.2
TPM3-202ENST00000302206 KCNJ14Q9UNX9 436 aa13.82□□□□□ -0.2
TPM3-202ENST00000302206 FER1L6Q2WGJ9 1857 aa13.81□□□□□ -0.2
TPM3-202ENST00000302206 CALML3P27482 149 aa13.81□□□□□ -0.2
TPM3-202ENST00000302206 NFIAQ12857 509 aa13.81□□□□□ -0.2
TPM3-202ENST00000302206 CFAP100Q494V2 611 aa13.81□□□□□ -0.2
TPM3-202ENST00000302206 GALNT17Q6IS24 598 aa13.81□□□□□ -0.2
TPM3-202ENST00000302206 MTMR14Q8NCE2 650 aa13.81□□□□□ -0.2
TPM3-202ENST00000302206 ENGASEQ8NFI3 743 aa13.81□□□□□ -0.2
TPM3-202ENST00000302206 TNMDQ9H2S6 317 aa13.81□□□□□ -0.2
TPM3-202ENST00000302206 CEP131Q9UPN4 1083 aa13.81□□□□□ -0.2
TPM3-202ENST00000302206 SIPA1L1O43166 1804 aa13.8□□□□□ -0.2
TPM3-202ENST00000302206 COL4A5P29400 1685 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms