RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 CLTAP09496 248 aa16.18■□□□□ 0.18
CDT1-201ENST00000301019 CYB5D1Q6P9G0 228 aa16.18■□□□□ 0.18
CDT1-201ENST00000301019 RASGRP2Q7LDG7 609 aa16.18■□□□□ 0.18
CDT1-201ENST00000301019 PARP9Q8IXQ6 854 aa16.18■□□□□ 0.18
CDT1-201ENST00000301019 STAMBPL1Q96FJ0 436 aa16.18■□□□□ 0.18
CDT1-201ENST00000301019 PCMTD1Q96MG8 357 aaPredicted RBP16.18■□□□□ 0.18
CDT1-201ENST00000301019 CCDC85AQ96PX6 553 aaPredicted RBP16.18■□□□□ 0.18
CDT1-201ENST00000301019 SLC39A6Q13433 755 aa16.17■□□□□ 0.18
CDT1-201ENST00000301019 TRADDQ15628 312 aa16.17■□□□□ 0.18
CDT1-201ENST00000301019 KRT40Q6A162 431 aa16.17■□□□□ 0.18
CDT1-201ENST00000301019 CCT8L2Q96SF2 557 aa16.17■□□□□ 0.18
CDT1-201ENST00000301019 LACRTQ9GZZ8 138 aa16.17■□□□□ 0.18
CDT1-201ENST00000301019 hCG_1642624A0A1W2PR95 340 aa16.17■□□□□ 0.18
CDT1-201ENST00000301019 PSMD2Q13200 908 aa16.17■□□□□ 0.18
CDT1-201ENST00000301019 WDR93Q6P2C0 686 aa16.17■□□□□ 0.18
CDT1-201ENST00000301019 B4GALNT4Q76KP1 1039 aa16.17■□□□□ 0.18
CDT1-201ENST00000301019 KRT28Q7Z3Y7 464 aa16.17■□□□□ 0.18
CDT1-201ENST00000301019 NKX2-3Q8TAU0 364 aa16.17■□□□□ 0.18
CDT1-201ENST00000301019 KAZALD1Q96I82 304 aa16.17■□□□□ 0.18
CDT1-201ENST00000301019 SHOX2O60902 331 aaPredicted RBP16.17■□□□□ 0.18
CDT1-201ENST00000301019 HSF2BPO75031 334 aa16.17■□□□□ 0.18
CDT1-201ENST00000301019 AP1ARQ63HQ0 302 aa16.17■□□□□ 0.18
CDT1-201ENST00000301019 ZIM3Q96PE6 472 aa16.17■□□□□ 0.18
CDT1-201ENST00000301019 NCK2O43639 380 aa16.16■□□□□ 0.18
CDT1-201ENST00000301019 BUB1BO60566 1050 aaPredicted RBP16.16■□□□□ 0.18
CDT1-201ENST00000301019 ODF2Q5BJF6 829 aa16.16■□□□□ 0.18
CDT1-201ENST00000301019 KRT26Q7Z3Y9 468 aa16.16■□□□□ 0.18
CDT1-201ENST00000301019 FMNL3Q8IVF7 1028 aa16.16■□□□□ 0.18
CDT1-201ENST00000301019 SPDYE1Q8NFV5 336 aaPredicted RBP16.16■□□□□ 0.18
CDT1-201ENST00000301019 TTF2Q9UNY4 1162 aaKnown RBP16.16■□□□□ 0.18
CDT1-201ENST00000301019 RCCD1A6NED2 376 aa16.16■□□□□ 0.18
CDT1-201ENST00000301019 BTBD18B2RXH4 712 aa16.16■□□□□ 0.18
CDT1-201ENST00000301019 DNM1LO00429 736 aa16.16■□□□□ 0.18
CDT1-201ENST00000301019 FAM153BP0C7A2 387 aa16.16■□□□□ 0.18
CDT1-201ENST00000301019 HSPD1P10809 573 aaKnown RBP16.16■□□□□ 0.18
CDT1-201ENST00000301019 AMPD2Q01433 879 aa16.16■□□□□ 0.18
CDT1-201ENST00000301019 FAM153CQ494X1 144 aa16.16■□□□□ 0.18
CDT1-201ENST00000301019 HIBCHQ6NVY1 386 aaPredicted RBP16.16■□□□□ 0.18
CDT1-201ENST00000301019 FAM153AQ9UHL3 310 aa16.16■□□□□ 0.18
CDT1-201ENST00000301019 WWC3Q9ULE0 1092 aa16.16■□□□□ 0.18
CDT1-201ENST00000301019 XIRP1Q702N8 1843 aaKnown RBP16.16■□□□□ 0.18
CDT1-201ENST00000301019 ATP5J2-PTCD1G3V325 749 aa16.15■□□□□ 0.18
CDT1-201ENST00000301019 PTCD1O75127 700 aaKnown RBP16.15■□□□□ 0.18
CDT1-201ENST00000301019 ZNF18P17022 549 aa16.15■□□□□ 0.18
CDT1-201ENST00000301019 PPP1R7Q15435 360 aa16.15■□□□□ 0.18
CDT1-201ENST00000301019 FILIP1LQ4L180 1135 aa16.15■□□□□ 0.18
CDT1-201ENST00000301019 ZNF483Q8TF39 744 aaPredicted RBP16.15■□□□□ 0.18
CDT1-201ENST00000301019 PICK1Q9NRD5 415 aa16.15■□□□□ 0.18
CDT1-201ENST00000301019 ABHD10Q9NUJ1 306 aa16.15■□□□□ 0.18
CDT1-201ENST00000301019 REXO2Q9Y3B8 237 aaKnown RBP16.15■□□□□ 0.18
CDT1-201ENST00000301019 EPN1Q9Y6I3 576 aaPredicted RBP16.15■□□□□ 0.18
CDT1-201ENST00000301019 NFXL1Q6ZNB6 911 aa16.15■□□□□ 0.18
CDT1-201ENST00000301019 NFU1Q9UMS0 254 aa16.15■□□□□ 0.18
CDT1-201ENST00000301019 KIF1AQ12756 1690 aa16.15■□□□□ 0.18
CDT1-201ENST00000301019 UBXN1Q04323 297 aa16.15■□□□□ 0.18
CDT1-201ENST00000301019 LMOD2Q6P5Q4 547 aa16.15■□□□□ 0.18
CDT1-201ENST00000301019 NSMCE1Q8WV22 266 aa16.15■□□□□ 0.18
CDT1-201ENST00000301019 EPSTI1Q96J88 318 aa16.15■□□□□ 0.18
CDT1-201ENST00000301019 MS4A14Q96JA4 679 aa16.15■□□□□ 0.18
CDT1-201ENST00000301019 PANX2Q96RD6 677 aa16.15■□□□□ 0.18
CDT1-201ENST00000301019 RIC3Q7Z5B4 369 aa16.14■□□□□ 0.17
CDT1-201ENST00000301019 DDX17Q92841 729 aaKnown RBP16.14■□□□□ 0.17
CDT1-201ENST00000301019 NR5A1Q13285 461 aa16.14■□□□□ 0.17
CDT1-201ENST00000301019 QPCTQ16769 361 aa16.14■□□□□ 0.17
CDT1-201ENST00000301019 SH3BP1Q9Y3L3 701 aa16.14■□□□□ 0.17
CDT1-201ENST00000301019 SYNRGQ9UMZ2 1314 aa16.14■□□□□ 0.17
CDT1-201ENST00000301019 NDUFA10O95299 355 aa16.13■□□□□ 0.17
CDT1-201ENST00000301019 EXOSC10Q01780 885 aaKnown RBP16.13■□□□□ 0.17
CDT1-201ENST00000301019 GNPTABQ3T906 1256 aa16.13■□□□□ 0.17
CDT1-201ENST00000301019 NFRKBQ6P4R8 1299 aa16.13■□□□□ 0.17
CDT1-201ENST00000301019 RALYLQ86SE5 291 aaKnown RBP16.13■□□□□ 0.17
CDT1-201ENST00000301019 NLRP14Q86W24 1093 aa16.13■□□□□ 0.17
CDT1-201ENST00000301019 SLC26A6Q9BXS9 759 aa16.13■□□□□ 0.17
CDT1-201ENST00000301019 VCPKMTQ9H867 229 aa16.13■□□□□ 0.17
CDT1-201ENST00000301019 VPS54Q9P1Q0 977 aa16.13■□□□□ 0.17
CDT1-201ENST00000301019 A0A1B0GTH6 734 aa16.13■□□□□ 0.17
CDT1-201ENST00000301019 GRM8O00222 908 aa16.13■□□□□ 0.17
CDT1-201ENST00000301019 C21orf2O43822 256 aa16.13■□□□□ 0.17
CDT1-201ENST00000301019 FLT4P35916 1363 aa16.13■□□□□ 0.17
CDT1-201ENST00000301019 DPYDQ12882 1025 aa16.13■□□□□ 0.17
CDT1-201ENST00000301019 TRAPPC11Q7Z392 1133 aa16.13■□□□□ 0.17
CDT1-201ENST00000301019 KSR1Q8IVT5 923 aa16.13■□□□□ 0.17
CDT1-201ENST00000301019 FUKQ8N0W3 1084 aa16.13■□□□□ 0.17
CDT1-201ENST00000301019 JMYQ8N9B5 988 aa16.13■□□□□ 0.17
CDT1-201ENST00000301019 PEAK1Q9H792 1746 aa16.13■□□□□ 0.17
CDT1-201ENST00000301019 VIPAS39Q9H9C1 493 aa16.13■□□□□ 0.17
CDT1-201ENST00000301019 SALL1Q9NSC2 1324 aa16.13■□□□□ 0.17
CDT1-201ENST00000301019 MARF1Q9Y4F3 1742 aaKnown RBP16.13■□□□□ 0.17
CDT1-201ENST00000301019 USP42Q9H9J4 1324 aaKnown RBP16.13■□□□□ 0.17
CDT1-201ENST00000301019 ENOX2Q16206 610 aaKnown RBP16.13■□□□□ 0.17
CDT1-201ENST00000301019 USPL1Q5W0Q7 1092 aa16.13■□□□□ 0.17
CDT1-201ENST00000301019 MYCBPAPQ8TBZ2 947 aa16.13■□□□□ 0.17
CDT1-201ENST00000301019 SPATS2LQ9NUQ6 558 aaKnown RBP16.13■□□□□ 0.17
CDT1-201ENST00000301019 FAM184BQ9ULE4 1060 aa16.13■□□□□ 0.17
CDT1-201ENST00000301019 USP54Q70EL1 1684 aa16.12■□□□□ 0.17
CDT1-201ENST00000301019 PHF20L1A8MW92 1017 aa16.12■□□□□ 0.17
CDT1-201ENST00000301019 FSBPO95073 299 aa16.12■□□□□ 0.17
CDT1-201ENST00000301019 KLK7P49862 253 aa16.12■□□□□ 0.17
CDT1-201ENST00000301019 ATL3Q6DD88 541 aa16.12■□□□□ 0.17
CDT1-201ENST00000301019 CNGA4Q8IV77 575 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms