RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 USP17L8P0C7I0 530 aa14.68□□□□□ -0.06
HIF3A-204ENST00000300862 MCM7P33993 719 aa14.68□□□□□ -0.06
HIF3A-204ENST00000300862 NLRP5P59047 1200 aa14.68□□□□□ -0.06
HIF3A-204ENST00000300862 KANK3Q6NY19 840 aa14.68□□□□□ -0.06
HIF3A-204ENST00000300862 NBPF5PQ86XG9 351 aaPredicted RBP14.68□□□□□ -0.06
HIF3A-204ENST00000300862 TNFRSF25Q93038 417 aa14.68□□□□□ -0.06
HIF3A-204ENST00000300862 ST7Q9NRC1 585 aa14.68□□□□□ -0.06
HIF3A-204ENST00000300862 RBM28Q9NW13 759 aaKnown RBP14.68□□□□□ -0.06
HIF3A-204ENST00000300862 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.68□□□□□ -0.06
HIF3A-204ENST00000300862 PPP2R2CQ9Y2T4 447 aa14.68□□□□□ -0.06
HIF3A-204ENST00000300862 WNK3Q9BYP7 1800 aa14.68□□□□□ -0.06
HIF3A-204ENST00000300862 TSPY2A6NKD2 308 aa14.68□□□□□ -0.06
HIF3A-204ENST00000300862 CDC25AP30304 524 aa14.68□□□□□ -0.06
HIF3A-204ENST00000300862 DHX8Q14562 1220 aaKnown RBP14.68□□□□□ -0.06
HIF3A-204ENST00000300862 FAM182BQ5T319 152 aa14.68□□□□□ -0.06
HIF3A-204ENST00000300862 CPLX3Q8WVH0 158 aa14.68□□□□□ -0.06
HIF3A-204ENST00000300862 BRMS1Q9HCU9 246 aa14.68□□□□□ -0.06
HIF3A-204ENST00000300862 ZNF446Q9NWS9 450 aa14.68□□□□□ -0.06
HIF3A-204ENST00000300862 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.68□□□□□ -0.06
HIF3A-204ENST00000300862 FGRP09769 529 aa14.67□□□□□ -0.06
HIF3A-204ENST00000300862 MTF1Q14872 753 aa14.67□□□□□ -0.06
HIF3A-204ENST00000300862 AMIGO3Q86WK7 504 aa14.67□□□□□ -0.06
HIF3A-204ENST00000300862 TRIML1Q8N9V2 468 aa14.67□□□□□ -0.06
HIF3A-204ENST00000300862 NLRP3Q96P20 1036 aa14.67□□□□□ -0.06
HIF3A-204ENST00000300862 CRNKL1Q9BZJ0 848 aaKnown RBP14.67□□□□□ -0.06
HIF3A-204ENST00000300862 MCM9Q9NXL9 1143 aa14.67□□□□□ -0.06
HIF3A-204ENST00000300862 ARHGAP6O43182 974 aa14.67□□□□□ -0.06
HIF3A-204ENST00000300862 MYO1BO43795 1136 aa14.67□□□□□ -0.06
HIF3A-204ENST00000300862 GPKOWQ92917 476 aaPredicted RBP eCLIP14.67□□□□□ -0.06
HIF3A-204ENST00000300862 SETDB2Q96T68 719 aa14.67□□□□□ -0.06
HIF3A-204ENST00000300862 DDAH1O94760 285 aa14.66□□□□□ -0.06
HIF3A-204ENST00000300862 CALM1P0DP23 149 aa14.66□□□□□ -0.06
HIF3A-204ENST00000300862 CALM2P0DP24 149 aa14.66□□□□□ -0.06
HIF3A-204ENST00000300862 CALM3P0DP25 149 aa14.66□□□□□ -0.06
HIF3A-204ENST00000300862 DPYDQ12882 1025 aa14.66□□□□□ -0.06
HIF3A-204ENST00000300862 NR1I3Q14994 352 aa14.66□□□□□ -0.06
HIF3A-204ENST00000300862 IL17AQ16552 155 aa14.66□□□□□ -0.06
HIF3A-204ENST00000300862 RASGRP4Q8TDF6 673 aa14.66□□□□□ -0.06
HIF3A-204ENST00000300862 DYNLL2Q96FJ2 89 aa14.66□□□□□ -0.06
HIF3A-204ENST00000300862 WDR24Q96S15 920 aa14.66□□□□□ -0.06
HIF3A-204ENST00000300862 SCG2P13521 617 aa14.66□□□□□ -0.06
HIF3A-204ENST00000300862 SH3RF1Q7Z6J0 888 aa14.66□□□□□ -0.06
HIF3A-204ENST00000300862 SYNRGQ9UMZ2 1314 aa14.66□□□□□ -0.06
HIF3A-204ENST00000300862 GNPATO15228 680 aa14.65□□□□□ -0.06
HIF3A-204ENST00000300862 ERCC5P28715 1186 aaPredicted RBP14.65□□□□□ -0.06
HIF3A-204ENST00000300862 CUL4BQ13620 913 aa14.65□□□□□ -0.06
HIF3A-204ENST00000300862 KARSQ15046 597 aaKnown RBP14.65□□□□□ -0.06
HIF3A-204ENST00000300862 RCSD1Q6JBY9 416 aa14.65□□□□□ -0.06
HIF3A-204ENST00000300862 CREBRFQ8IUR6 639 aa14.65□□□□□ -0.06
HIF3A-204ENST00000300862 FERMT2Q96AC1 680 aa14.65□□□□□ -0.06
HIF3A-204ENST00000300862 GPR101Q96P66 508 aaPredicted RBP14.65□□□□□ -0.06
HIF3A-204ENST00000300862 CCP110O43303 1012 aa14.65□□□□□ -0.06
HIF3A-204ENST00000300862 ORC4O43929 436 aa14.65□□□□□ -0.06
HIF3A-204ENST00000300862 XDHP47989 1333 aa14.65□□□□□ -0.06
HIF3A-204ENST00000300862 LAMB2P55268 1798 aa14.65□□□□□ -0.06
HIF3A-204ENST00000300862 GNG11P61952 73 aa14.65□□□□□ -0.06
HIF3A-204ENST00000300862 PIP4K2BP78356 416 aa14.65□□□□□ -0.06
HIF3A-204ENST00000300862 ATP2C1P98194 919 aaPredicted RBP14.65□□□□□ -0.06
HIF3A-204ENST00000300862 TFAP4Q01664 338 aa14.65□□□□□ -0.06
HIF3A-204ENST00000300862 ARHGAP29Q52LW3 1261 aa14.65□□□□□ -0.06
HIF3A-204ENST00000300862 SLC10A5Q5PT55 438 aa14.65□□□□□ -0.06
HIF3A-204ENST00000300862 APTXQ7Z2E3 356 aaKnown RBP14.65□□□□□ -0.06
HIF3A-204ENST00000300862 DZIP1Q86YF9 867 aaKnown RBP14.65□□□□□ -0.06
HIF3A-204ENST00000300862 STAG2Q8N3U4 1231 aa14.65□□□□□ -0.06
HIF3A-204ENST00000300862 CARD6Q9BX69 1037 aa14.65□□□□□ -0.06
HIF3A-204ENST00000300862 MAPK8IP1Q9UQF2 711 aa14.65□□□□□ -0.06
HIF3A-204ENST00000300862 RREB1Q92766 1687 aa14.64□□□□□ -0.07
HIF3A-204ENST00000300862 PHLPP2Q6ZVD8 1323 aa14.64□□□□□ -0.07
HIF3A-204ENST00000300862 A0A0U1RQJ8 604 aa14.64□□□□□ -0.07
HIF3A-204ENST00000300862 A0A1B0GTH6 734 aa14.64□□□□□ -0.07
HIF3A-204ENST00000300862 SOWAHDA6NJG2 315 aa14.64□□□□□ -0.07
HIF3A-204ENST00000300862 PPP1R3GB7ZBB8 358 aa14.64□□□□□ -0.07
HIF3A-204ENST00000300862 ZBTB22O15209 634 aa14.64□□□□□ -0.07
HIF3A-204ENST00000300862 ZSCAN12O43309 604 aa14.64□□□□□ -0.07
HIF3A-204ENST00000300862 SPATA1Q5VX52 437 aa14.64□□□□□ -0.07
HIF3A-204ENST00000300862 SAMD1Q6SPF0 538 aaPredicted RBP14.64□□□□□ -0.07
HIF3A-204ENST00000300862 BARGINQ6ZT62 677 aa14.64□□□□□ -0.07
HIF3A-204ENST00000300862 ATRIPQ8WXE1 791 aa14.64□□□□□ -0.07
HIF3A-204ENST00000300862 MTRQ99707 1265 aa14.64□□□□□ -0.07
HIF3A-204ENST00000300862 IRX2Q9BZI1 471 aaPredicted RBP14.64□□□□□ -0.07
HIF3A-204ENST00000300862 EPC1Q9H2F5 836 aa14.64□□□□□ -0.07
HIF3A-204ENST00000300862 CTNND2Q9UQB3 1225 aa14.64□□□□□ -0.07
HIF3A-204ENST00000300862 CCT6AP40227 531 aaKnown RBP14.64□□□□□ -0.07
HIF3A-204ENST00000300862 DIXDC1Q155Q3 683 aa14.64□□□□□ -0.07
HIF3A-204ENST00000300862 GRIK5Q16478 980 aa14.64□□□□□ -0.07
HIF3A-204ENST00000300862 ATP8A2Q9NTI2 1148 aa14.64□□□□□ -0.07
HIF3A-204ENST00000300862 PARP3Q9Y6F1 533 aa14.64□□□□□ -0.07
HIF3A-204ENST00000300862 FAM205AQ6ZU69 1335 aa14.63□□□□□ -0.07
HIF3A-204ENST00000300862 USP17L3A6NCW0 530 aa14.63□□□□□ -0.07
HIF3A-204ENST00000300862 USP17L4A6NCW7 530 aa14.63□□□□□ -0.07
HIF3A-204ENST00000300862 SEMA3EO15041 775 aa14.63□□□□□ -0.07
HIF3A-204ENST00000300862 STX10O60499 249 aa14.63□□□□□ -0.07
HIF3A-204ENST00000300862 ZPR1O75312 459 aa14.63□□□□□ -0.07
HIF3A-204ENST00000300862 PCP11498 1178 aaKnown RBP14.63□□□□□ -0.07
HIF3A-204ENST00000300862 RBL2Q08999 1139 aa14.63□□□□□ -0.07
HIF3A-204ENST00000300862 PFKFB3Q16875 520 aaPredicted RBP14.63□□□□□ -0.07
HIF3A-204ENST00000300862 USP17L1Q7RTZ2 530 aa14.63□□□□□ -0.07
HIF3A-204ENST00000300862 IGSF22Q8N9C0 903 aa14.63□□□□□ -0.07
HIF3A-204ENST00000300862 SLC44A5Q8NCS7 719 aa14.63□□□□□ -0.07
HIF3A-204ENST00000300862 CCDC34Q96HJ3 373 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms