RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 GUCY1A3Q02108 690 aa12.33□□□□□ -0.44
SNX20-201ENST00000300590 CUL4BQ13620 913 aa12.33□□□□□ -0.44
SNX20-201ENST00000300590 NTRK3Q16288 839 aa12.33□□□□□ -0.44
SNX20-201ENST00000300590 RABL6Q3YEC7 729 aaPredicted RBP12.33□□□□□ -0.44
SNX20-201ENST00000300590 NT5DC1Q5TFE4 455 aa12.33□□□□□ -0.44
SNX20-201ENST00000300590 KIRREL3Q8IZU9 778 aa12.33□□□□□ -0.44
SNX20-201ENST00000300590 TTC5Q8N0Z6 440 aa12.33□□□□□ -0.44
SNX20-201ENST00000300590 APPBP2Q92624 585 aa12.33□□□□□ -0.44
SNX20-201ENST00000300590 SYMPKQ92797 1274 aaKnown RBP12.33□□□□□ -0.44
SNX20-201ENST00000300590 LUC7L2Q9Y383 392 aaKnown RBP12.33□□□□□ -0.44
SNX20-201ENST00000300590 MYH8P13535 1937 aa12.33□□□□□ -0.44
SNX20-201ENST00000300590 PPP1R3GB7ZBB8 358 aa12.33□□□□□ -0.44
SNX20-201ENST00000300590 IPO7O95373 1038 aaKnown RBP12.33□□□□□ -0.44
SNX20-201ENST00000300590 SEC24CP53992 1094 aa12.33□□□□□ -0.44
SNX20-201ENST00000300590 SF3A3Q12874 501 aaKnown RBP eCLIP12.33□□□□□ -0.44
SNX20-201ENST00000300590 TTF1Q15361 905 aaPredicted RBP12.33□□□□□ -0.44
SNX20-201ENST00000300590 ZNF174Q15697 407 aa12.33□□□□□ -0.44
SNX20-201ENST00000300590 FAM217BQ9NTX9 383 aaPredicted RBP12.33□□□□□ -0.44
SNX20-201ENST00000300590 DONSONQ9NYP3 566 aa12.33□□□□□ -0.44
SNX20-201ENST00000300590 MYO1AQ9UBC5 1043 aa12.33□□□□□ -0.44
SNX20-201ENST00000300590 NWD1Q149M9 1564 aa12.33□□□□□ -0.44
SNX20-201ENST00000300590 RCCD1A6NED2 376 aa12.32□□□□□ -0.44
SNX20-201ENST00000300590 KCNJ18B7U540 433 aa12.32□□□□□ -0.44
SNX20-201ENST00000300590 SHOX2O60902 331 aaPredicted RBP12.32□□□□□ -0.44
SNX20-201ENST00000300590 APBA1Q02410 837 aa12.32□□□□□ -0.44
SNX20-201ENST00000300590 KCNJ12Q14500 433 aa12.32□□□□□ -0.44
SNX20-201ENST00000300590 CDKAL1Q5VV42 579 aa12.32□□□□□ -0.44
SNX20-201ENST00000300590 TRIM22Q8IYM9 498 aa12.32□□□□□ -0.44
SNX20-201ENST00000300590 CCDC51Q96ER9 411 aa12.32□□□□□ -0.44
SNX20-201ENST00000300590 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.32□□□□□ -0.44
SNX20-201ENST00000300590 TRIM49BA6NDI0 452 aa12.32□□□□□ -0.44
SNX20-201ENST00000300590 GRIN2DO15399 1336 aa12.32□□□□□ -0.44
SNX20-201ENST00000300590 MMP1P03956 469 aa12.32□□□□□ -0.44
SNX20-201ENST00000300590 CEBPAP49715 358 aaPredicted RBP12.32□□□□□ -0.44
SNX20-201ENST00000300590 IFT88Q13099 833 aa12.32□□□□□ -0.44
SNX20-201ENST00000300590 KCTD19Q17RG1 926 aaPredicted RBP12.32□□□□□ -0.44
SNX20-201ENST00000300590 RILPL1Q5EBL4 403 aa12.32□□□□□ -0.44
SNX20-201ENST00000300590 TSEN2Q8NCE0 465 aaKnown RBP12.32□□□□□ -0.44
SNX20-201ENST00000300590 OR8K1Q8NGG5 319 aa12.32□□□□□ -0.44
SNX20-201ENST00000300590 ZNF526Q8TF50 670 aaPredicted RBP12.32□□□□□ -0.44
SNX20-201ENST00000300590 HAUS4Q9H6D7 363 aa12.32□□□□□ -0.44
SNX20-201ENST00000300590 FMN2Q9NZ56 1722 aa12.32□□□□□ -0.44
SNX20-201ENST00000300590 TECPR2O15040 1411 aa12.32□□□□□ -0.44
SNX20-201ENST00000300590 CCDC196A0A1B0GTZ2 297 aa12.32□□□□□ -0.44
SNX20-201ENST00000300590 HERVK_113P62684 666 aa12.32□□□□□ -0.44
SNX20-201ENST00000300590 FOXO4P98177 505 aa12.32□□□□□ -0.44
SNX20-201ENST00000300590 CKAP4Q07065 602 aaKnown RBP12.32□□□□□ -0.44
SNX20-201ENST00000300590 RPAINQ86UA6 219 aa12.32□□□□□ -0.44
SNX20-201ENST00000300590 FAM184BQ9ULE4 1060 aa12.32□□□□□ -0.44
SNX20-201ENST00000300590 SRPRBQ9Y5M8 271 aaKnown RBP12.32□□□□□ -0.44
SNX20-201ENST00000300590 PXDNQ92626 1479 aa12.31□□□□□ -0.44
SNX20-201ENST00000300590 PTPRUQ92729 1446 aa12.31□□□□□ -0.44
SNX20-201ENST00000300590 KRT86O43790 486 aa12.31□□□□□ -0.44
SNX20-201ENST00000300590 PRDM1O75626 825 aa12.31□□□□□ -0.44
SNX20-201ENST00000300590 FBXL16Q8N461 479 aa12.31□□□□□ -0.44
SNX20-201ENST00000300590 IFT81Q8WYA0 676 aa12.31□□□□□ -0.44
SNX20-201ENST00000300590 N4BP2L2Q92802 583 aaPredicted RBP12.31□□□□□ -0.44
SNX20-201ENST00000300590 BCCIPQ9P287 314 aaKnown RBP eCLIP12.31□□□□□ -0.44
SNX20-201ENST00000300590 GDAQ9Y2T3 454 aa12.31□□□□□ -0.44
SNX20-201ENST00000300590 HSF2BPO75031 334 aa12.31□□□□□ -0.44
SNX20-201ENST00000300590 E2F5Q15329 346 aa12.31□□□□□ -0.44
SNX20-201ENST00000300590 KRT26Q7Z3Y9 468 aa12.31□□□□□ -0.44
SNX20-201ENST00000300590 NELFBQ8WX92 580 aa12.31□□□□□ -0.44
SNX20-201ENST00000300590 ZSWIM5Q9P217 1185 aa12.31□□□□□ -0.44
SNX20-201ENST00000300590 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.31□□□□□ -0.44
SNX20-201ENST00000300590 NRXN3Q9Y4C0 1643 aa12.31□□□□□ -0.44
SNX20-201ENST00000300590 N4BP2Q86UW6 1770 aaPredicted RBP12.31□□□□□ -0.44
SNX20-201ENST00000300590 ESYT3A0FGR9 886 aa12.31□□□□□ -0.44
SNX20-201ENST00000300590 BACH1O14867 736 aa12.31□□□□□ -0.44
SNX20-201ENST00000300590 HPDP32754 393 aaPredicted RBP12.31□□□□□ -0.44
SNX20-201ENST00000300590 TTMPQ5BVD1 217 aa12.31□□□□□ -0.44
SNX20-201ENST00000300590 TTLL7Q6ZT98 887 aa12.31□□□□□ -0.44
SNX20-201ENST00000300590 ANKRD13CQ8N6S4 541 aa12.31□□□□□ -0.44
SNX20-201ENST00000300590 AGPAT5Q9NUQ2 364 aa12.31□□□□□ -0.44
SNX20-201ENST00000300590 NEO1Q92859 1461 aa12.3□□□□□ -0.44
SNX20-201ENST00000300590 PSMD14O00487 310 aa12.3□□□□□ -0.44
SNX20-201ENST00000300590 OPA1O60313 960 aa12.3□□□□□ -0.44
SNX20-201ENST00000300590 TRHP20396 242 aaPredicted RBP12.3□□□□□ -0.44
SNX20-201ENST00000300590 RNASE9P60153 205 aaKnown RBP12.3□□□□□ -0.44
SNX20-201ENST00000300590 NNTQ13423 1086 aa12.3□□□□□ -0.44
SNX20-201ENST00000300590 IGDCC4Q8TDY8 1250 aa12.3□□□□□ -0.44
SNX20-201ENST00000300590 SCLT1Q96NL6 688 aa12.3□□□□□ -0.44
SNX20-201ENST00000300590 CPDO75976 1380 aa12.3□□□□□ -0.44
SNX20-201ENST00000300590 TRIM75PA6NK02 468 aa12.3□□□□□ -0.44
SNX20-201ENST00000300590 MEFVO15553 781 aaPredicted RBP12.3□□□□□ -0.44
SNX20-201ENST00000300590 TRIM21P19474 475 aaKnown RBP12.3□□□□□ -0.44
SNX20-201ENST00000300590 GUCY2FP51841 1108 aa12.3□□□□□ -0.44
SNX20-201ENST00000300590 CCDC96Q2M329 555 aa12.3□□□□□ -0.44
SNX20-201ENST00000300590 CCDC57Q2TAC2 916 aa12.3□□□□□ -0.44
SNX20-201ENST00000300590 TCP11X2Q5H9J9 407 aa12.3□□□□□ -0.44
SNX20-201ENST00000300590 EARS2Q5JPH6 523 aaKnown RBP12.3□□□□□ -0.44
SNX20-201ENST00000300590 CCDC181Q5TID7 509 aa12.3□□□□□ -0.44
SNX20-201ENST00000300590 LRCH2Q5VUJ6 765 aa12.3□□□□□ -0.44
SNX20-201ENST00000300590 B4GALNT4Q76KP1 1039 aa12.3□□□□□ -0.44
SNX20-201ENST00000300590 PRPF38AQ8NAV1 312 aaKnown RBP12.3□□□□□ -0.44
SNX20-201ENST00000300590 PLIN2Q99541 437 aa12.3□□□□□ -0.44
SNX20-201ENST00000300590 LY9Q9HBG7 655 aa12.3□□□□□ -0.44
SNX20-201ENST00000300590 SLC24A3Q9HC58 644 aa12.3□□□□□ -0.44
SNX20-201ENST00000300590 PPANQ9NQ55 473 aaKnown RBP12.3□□□□□ -0.44
SNX20-201ENST00000300590 EID1Q9Y6B2 187 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms