RNA–Protein interactions for RNA: ENST00000296444.6

SHISA5-201, Transcript of shisa family member 5, humanhuman

TSL 1 (best) BASIC

Gene SHISA5, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-201ENST00000296444 ZNRF3Q9ULT6 936 aa27.86■■■□□ 2.05
SHISA5-201ENST00000296444 SIPA1L1O43166 1804 aa27.86■■■□□ 2.05
SHISA5-201ENST00000296444 MYH6P13533 1939 aa27.86■■■□□ 2.05
SHISA5-201ENST00000296444 HDLBPQ00341 1268 aaKnown RBP27.86■■■□□ 2.05
SHISA5-201ENST00000296444 LINC00301Q8NCQ3 95 aa27.86■■■□□ 2.05
SHISA5-201ENST00000296444 GPKOWQ92917 476 aaPredicted RBP eCLIP27.86■■■□□ 2.05
SHISA5-201ENST00000296444 MAP7D2Q96T17 732 aa27.86■■■□□ 2.05
SHISA5-201ENST00000296444 IDI2Q9BXS1 227 aa27.86■■■□□ 2.05
SHISA5-201ENST00000296444 CFAP45Q9UL16 551 aa27.86■■■□□ 2.05
SHISA5-201ENST00000296444 WNT7AO00755 349 aa27.85■■■□□ 2.05
SHISA5-201ENST00000296444 MARCKSP29966 332 aaPredicted RBP27.85■■■□□ 2.05
SHISA5-201ENST00000296444 TYW1BQ6NUM6 668 aa27.85■■■□□ 2.05
SHISA5-201ENST00000296444 DACT1Q9NYF0 836 aa27.85■■■□□ 2.05
SHISA5-201ENST00000296444 PCDHA7Q9UN72 937 aa27.85■■■□□ 2.05
SHISA5-201ENST00000296444 BRCA1P38398 1863 aaKnown RBP27.85■■■□□ 2.05
SHISA5-201ENST00000296444 USP17L5A8MUK1 530 aa27.85■■■□□ 2.05
SHISA5-201ENST00000296444 MTMR4Q9NYA4 1195 aa27.85■■■□□ 2.05
SHISA5-201ENST00000296444 NIM1KQ8IY84 436 aa27.84■■■□□ 2.05
SHISA5-201ENST00000296444 TAOK3Q9H2K8 898 aa27.84■■■□□ 2.05
SHISA5-201ENST00000296444 RTEL1Q9NZ71 1219 aa27.84■■■□□ 2.05
SHISA5-201ENST00000296444 SPDYE2BA6NHP3 402 aa27.84■■■□□ 2.05
SHISA5-201ENST00000296444 SPDYE6P0CI01 402 aa27.84■■■□□ 2.05
SHISA5-201ENST00000296444 CALM1P0DP23 149 aa27.84■■■□□ 2.05
SHISA5-201ENST00000296444 CALM2P0DP24 149 aa27.84■■■□□ 2.05
SHISA5-201ENST00000296444 CALM3P0DP25 149 aa27.84■■■□□ 2.05
SHISA5-201ENST00000296444 TRIM29Q14134 588 aa27.84■■■□□ 2.05
SHISA5-201ENST00000296444 UBA5Q9GZZ9 404 aa27.84■■■□□ 2.05
SHISA5-201ENST00000296444 RBM28Q9NW13 759 aaKnown RBP27.84■■■□□ 2.05
SHISA5-201ENST00000296444 MRVI1Q9Y6F6 885 aa27.84■■■□□ 2.05
SHISA5-201ENST00000296444 MPHOSPH10O00566 681 aaKnown RBP27.83■■■□□ 2.05
SHISA5-201ENST00000296444 GRM4Q14833 912 aa27.83■■■□□ 2.05
SHISA5-201ENST00000296444 SF3A1Q15459 793 aaKnown RBP27.83■■■□□ 2.05
SHISA5-201ENST00000296444 CLIP2Q9UDT6 1046 aa27.83■■■□□ 2.05
SHISA5-201ENST00000296444 ATP2B1P20020 1258 aa27.82■■■□□ 2.04
SHISA5-201ENST00000296444 ME1P48163 572 aa27.82■■■□□ 2.04
SHISA5-201ENST00000296444 NBPF9Q3BBW0 867 aa27.82■■■□□ 2.04
SHISA5-201ENST00000296444 FRMPD2Q68DX3 1309 aaPredicted RBP27.82■■■□□ 2.04
SHISA5-201ENST00000296444 IGKV6D-41A0A0C4DH26 115 aa27.82■■■□□ 2.04
SHISA5-201ENST00000296444 GNL2Q13823 731 aaKnown RBP27.82■■■□□ 2.04
SHISA5-201ENST00000296444 ZNF396Q96N95 335 aaPredicted RBP27.82■■■□□ 2.04
SHISA5-201ENST00000296444 GDF11O95390 407 aa27.81■■■□□ 2.04
SHISA5-201ENST00000296444 BRAPQ7Z569 592 aa27.81■■■□□ 2.04
SHISA5-201ENST00000296444 BICD2Q8TD16 824 aa27.81■■■□□ 2.04
SHISA5-201ENST00000296444 MAP3K14Q99558 947 aa27.81■■■□□ 2.04
SHISA5-201ENST00000296444 ZNF287Q9HBT7 754 aa27.81■■■□□ 2.04
SHISA5-201ENST00000296444 PALM3A6NDB9 673 aaPredicted RBP27.81■■■□□ 2.04
SHISA5-201ENST00000296444 NOVP48745 357 aa27.81■■■□□ 2.04
SHISA5-201ENST00000296444 ATP2B2Q01814 1243 aa27.81■■■□□ 2.04
SHISA5-201ENST00000296444 AKAP17AQ02040 695 aaKnown RBP27.81■■■□□ 2.04
SHISA5-201ENST00000296444 CSPP1Q1MSJ5 1256 aa27.81■■■□□ 2.04
SHISA5-201ENST00000296444 ANO1Q5XXA6 986 aa27.81■■■□□ 2.04
SHISA5-201ENST00000296444 NOSTRINQ8IVI9 506 aa27.81■■■□□ 2.04
SHISA5-201ENST00000296444 PHF20Q9BVI0 1012 aa27.81■■■□□ 2.04
SHISA5-201ENST00000296444 VAT1LQ9HCJ6 419 aa27.81■■■□□ 2.04
SHISA5-201ENST00000296444 PPP2R5BQ15173 497 aa27.8■■■□□ 2.04
SHISA5-201ENST00000296444 LRSAM1Q6UWE0 723 aa27.8■■■□□ 2.04
SHISA5-201ENST00000296444 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.8■■■□□ 2.04
SHISA5-201ENST00000296444 FER1L6Q2WGJ9 1857 aa27.8■■■□□ 2.04
SHISA5-201ENST00000296444 GOLGA6L4A6NEF3 574 aa27.8■■■□□ 2.04
SHISA5-201ENST00000296444 RNF214Q8ND24 703 aa27.8■■■□□ 2.04
SHISA5-201ENST00000296444 RBM26Q5T8P6 1007 aaKnown RBP27.79■■■□□ 2.04
SHISA5-201ENST00000296444 SIAH1Q8IUQ4 282 aa27.79■■■□□ 2.04
SHISA5-201ENST00000296444 ERCC4Q92889 916 aaPredicted RBP27.79■■■□□ 2.04
SHISA5-201ENST00000296444 CABP5Q9NP86 173 aa27.79■■■□□ 2.04
SHISA5-201ENST00000296444 ZNF70Q9UC06 446 aaPredicted RBP27.79■■■□□ 2.04
SHISA5-201ENST00000296444 PSME4Q14997 1843 aa27.79■■■□□ 2.04
SHISA5-201ENST00000296444 ASTN2O75129 1339 aaPredicted RBP27.79■■■□□ 2.04
SHISA5-201ENST00000296444 KLRF2D3W0D1 207 aa27.79■■■□□ 2.04
SHISA5-201ENST00000296444 HLA-DOAP06340 250 aa27.79■■■□□ 2.04
SHISA5-201ENST00000296444 PTPAQ15257 358 aa27.79■■■□□ 2.04
SHISA5-201ENST00000296444 CCDC183Q5T5S1 534 aa27.79■■■□□ 2.04
SHISA5-201ENST00000296444 CCAR1Q8IX12 1150 aaKnown RBP27.79■■■□□ 2.04
SHISA5-201ENST00000296444 CKAP2LQ8IYA6 745 aa27.79■■■□□ 2.04
SHISA5-201ENST00000296444 WASF1Q92558 559 aa27.79■■■□□ 2.04
SHISA5-201ENST00000296444 A0A1B0GVL5 298 aa27.78■■■□□ 2.04
SHISA5-201ENST00000296444 GRIN1Q05586 938 aa27.78■■■□□ 2.04
SHISA5-201ENST00000296444 DLGAP5Q15398 846 aa27.78■■■□□ 2.04
SHISA5-201ENST00000296444 GRIPAP1Q4V328 841 aa27.78■■■□□ 2.04
SHISA5-201ENST00000296444 CLIC6Q96NY7 704 aa27.78■■■□□ 2.04
SHISA5-201ENST00000296444 POLR3EQ9NVU0 708 aa27.78■■■□□ 2.04
SHISA5-201ENST00000296444 PCDHB6Q9Y5E3 794 aa27.78■■■□□ 2.04
SHISA5-201ENST00000296444 CD2APQ9Y5K6 639 aa27.78■■■□□ 2.04
SHISA5-201ENST00000296444 SCG2P13521 617 aa27.78■■■□□ 2.04
SHISA5-201ENST00000296444 SNW1Q13573 536 aaKnown RBP27.78■■■□□ 2.04
SHISA5-201ENST00000296444 STK38Q15208 465 aa27.78■■■□□ 2.04
SHISA5-201ENST00000296444 TMEM39BQ9GZU3 492 aa27.78■■■□□ 2.04
SHISA5-201ENST00000296444 VEZTQ9HBM0 779 aa27.78■■■□□ 2.04
SHISA5-201ENST00000296444 PI4KBQ9UBF8 816 aa27.78■■■□□ 2.04
SHISA5-201ENST00000296444 A0A087WWV3 80 aa27.77■■■□□ 2.04
SHISA5-201ENST00000296444 TOP1P11387 765 aaKnown RBP27.77■■■□□ 2.04
SHISA5-201ENST00000296444 TTBK2Q6IQ55 1244 aa27.77■■■□□ 2.04
SHISA5-201ENST00000296444 SPTLC2O15270 562 aa27.77■■■□□ 2.04
SHISA5-201ENST00000296444 ZNF500O60304 480 aaPredicted RBP27.77■■■□□ 2.04
SHISA5-201ENST00000296444 PDHBP11177 359 aa27.77■■■□□ 2.04
SHISA5-201ENST00000296444 PFKFB3Q16875 520 aaPredicted RBP27.77■■■□□ 2.04
SHISA5-201ENST00000296444 AXDND1Q5T1B0 1012 aaPredicted RBP27.77■■■□□ 2.04
SHISA5-201ENST00000296444 RASGRP4Q8TDF6 673 aa27.77■■■□□ 2.04
SHISA5-201ENST00000296444 CNTNAP1P78357 1384 aa27.76■■■□□ 2.03
SHISA5-201ENST00000296444 SEPT2Q15019 361 aa27.76■■■□□ 2.03
SHISA5-201ENST00000296444 CSRNP1Q96S65 589 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms