RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 SP4Q02446 784 aa14.19□□□□□ -0.14
PTCD1-201ENST00000292478 MTMR3Q13615 1198 aa14.19□□□□□ -0.14
PTCD1-201ENST00000292478 ZNF365Q70YC5 407 aa14.19□□□□□ -0.14
PTCD1-201ENST00000292478 VTI1AQ96AJ9 217 aa14.19□□□□□ -0.14
PTCD1-201ENST00000292478 RRAGDQ9NQL2 400 aaPredicted RBP14.19□□□□□ -0.14
PTCD1-201ENST00000292478 AGTPBP1Q9UPW5 1226 aa14.19□□□□□ -0.14
PTCD1-201ENST00000292478 DNM2P50570 870 aa14.19□□□□□ -0.14
PTCD1-201ENST00000292478 WHAMMP3Q1A5X7 153 aa14.19□□□□□ -0.14
PTCD1-201ENST00000292478 OR8K1Q8NGG5 319 aa14.19□□□□□ -0.14
PTCD1-201ENST00000292478 ZNF500O60304 480 aaPredicted RBP14.19□□□□□ -0.14
PTCD1-201ENST00000292478 GCNT3O95395 438 aa14.19□□□□□ -0.14
PTCD1-201ENST00000292478 TRAPPC10P48553 1259 aa14.19□□□□□ -0.14
PTCD1-201ENST00000292478 LRRC24Q50LG9 513 aa14.19□□□□□ -0.14
PTCD1-201ENST00000292478 MFSD14BQ5SR56 506 aa14.19□□□□□ -0.14
PTCD1-201ENST00000292478 ADCY10Q96PN6 1610 aa14.19□□□□□ -0.14
PTCD1-201ENST00000292478 LAD1O00515 517 aa14.19□□□□□ -0.14
PTCD1-201ENST00000292478 PPP6R2O75170 966 aa14.19□□□□□ -0.14
PTCD1-201ENST00000292478 NR1I2O75469 434 aa14.19□□□□□ -0.14
PTCD1-201ENST00000292478 GAS8O95995 478 aa14.19□□□□□ -0.14
PTCD1-201ENST00000292478 GABPB1Q06547 395 aaPredicted RBP14.19□□□□□ -0.14
PTCD1-201ENST00000292478 UTP14CQ5TAP6 766 aaKnown RBP14.19□□□□□ -0.14
PTCD1-201ENST00000292478 SPATA24Q86W54 205 aa14.19□□□□□ -0.14
PTCD1-201ENST00000292478 SMAP1Q8IYB5 467 aaPredicted RBP14.19□□□□□ -0.14
PTCD1-201ENST00000292478 UGGT1Q9NYU2 1555 aa14.19□□□□□ -0.14
PTCD1-201ENST00000292478 ANKARQ7Z5J8 1434 aa14.18□□□□□ -0.14
PTCD1-201ENST00000292478 TET3O43151 1660 aa14.18□□□□□ -0.14
PTCD1-201ENST00000292478 NT5C2P49902 561 aa14.18□□□□□ -0.14
PTCD1-201ENST00000292478 RPS6KA1Q15418 735 aa14.18□□□□□ -0.14
PTCD1-201ENST00000292478 KCNJ18B7U540 433 aa14.18□□□□□ -0.14
PTCD1-201ENST00000292478 CHRNDQ07001 517 aa14.18□□□□□ -0.14
PTCD1-201ENST00000292478 KCNJ12Q14500 433 aa14.18□□□□□ -0.14
PTCD1-201ENST00000292478 DLGAP5Q15398 846 aa14.18□□□□□ -0.14
PTCD1-201ENST00000292478 OTUD6AQ7L8S5 288 aa14.18□□□□□ -0.14
PTCD1-201ENST00000292478 NEK8Q86SG6 692 aa14.18□□□□□ -0.14
PTCD1-201ENST00000292478 NLRX1Q86UT6 975 aa14.18□□□□□ -0.14
PTCD1-201ENST00000292478 MYOCDQ8IZQ8 938 aa14.18□□□□□ -0.14
PTCD1-201ENST00000292478 MICALL1Q8N3F8 863 aa14.18□□□□□ -0.14
PTCD1-201ENST00000292478 PNMA1Q8ND90 353 aa14.18□□□□□ -0.14
PTCD1-201ENST00000292478 FBXO18Q8NFZ0 1043 aa14.18□□□□□ -0.14
PTCD1-201ENST00000292478 CUEDC2Q9H467 287 aa14.18□□□□□ -0.14
PTCD1-201ENST00000292478 CTTNBP2NLQ9P2B4 639 aa14.18□□□□□ -0.14
PTCD1-201ENST00000292478 PCDHB13Q9Y5F0 798 aa14.18□□□□□ -0.14
PTCD1-201ENST00000292478 OR52Z1P0C646 297 aa14.18□□□□□ -0.14
PTCD1-201ENST00000292478 SEC62Q99442 399 aaKnown RBP14.18□□□□□ -0.14
PTCD1-201ENST00000292478 PCDHA7Q9UN72 937 aa14.18□□□□□ -0.14
PTCD1-201ENST00000292478 MYCLP12524 364 aaPredicted RBP14.18□□□□□ -0.14
PTCD1-201ENST00000292478 CDC25BP30305 580 aa14.18□□□□□ -0.14
PTCD1-201ENST00000292478 MORC3Q14149 939 aa14.18□□□□□ -0.14
PTCD1-201ENST00000292478 BLZF1Q9H2G9 400 aa14.18□□□□□ -0.14
PTCD1-201ENST00000292478 CUL4AQ13619 759 aa14.17□□□□□ -0.14
PTCD1-201ENST00000292478 PPP2R5EQ16537 467 aa14.17□□□□□ -0.14
PTCD1-201ENST00000292478 TRIM58Q8NG06 486 aa14.17□□□□□ -0.14
PTCD1-201ENST00000292478 FOXP1Q9H334 677 aaPredicted RBP14.17□□□□□ -0.14
PTCD1-201ENST00000292478 AZI2Q9H6S1 392 aa14.17□□□□□ -0.14
PTCD1-201ENST00000292478 FAM204AQ9H8W3 233 aa14.17□□□□□ -0.14
PTCD1-201ENST00000292478 USP21Q9UK80 565 aa14.17□□□□□ -0.14
PTCD1-201ENST00000292478 YWHAEP62258 255 aaKnown RBP14.17□□□□□ -0.14
PTCD1-201ENST00000292478 BIN2Q9UBW5 565 aaPredicted RBP14.17□□□□□ -0.14
PTCD1-201ENST00000292478 NPHP4O75161 1426 aaPredicted RBP14.17□□□□□ -0.14
PTCD1-201ENST00000292478 SLF1Q9BQI6 1058 aa14.17□□□□□ -0.14
PTCD1-201ENST00000292478 TRIM7Q9C029 511 aa14.17□□□□□ -0.14
PTCD1-201ENST00000292478 PARP2Q9UGN5 583 aa14.17□□□□□ -0.14
PTCD1-201ENST00000292478 DBNLQ9UJU6 430 aaKnown RBP14.17□□□□□ -0.14
PTCD1-201ENST00000292478 SMIM23A6NLE4 172 aa14.17□□□□□ -0.14
PTCD1-201ENST00000292478 N4BP1O75113 896 aaKnown RBP14.17□□□□□ -0.14
PTCD1-201ENST00000292478 CFBP00751 764 aa14.17□□□□□ -0.14
PTCD1-201ENST00000292478 HOXA7P31268 230 aaPredicted RBP14.17□□□□□ -0.14
PTCD1-201ENST00000292478 ADD1P35611 737 aaKnown RBP14.17□□□□□ -0.14
PTCD1-201ENST00000292478 BCAMP50895 628 aa14.17□□□□□ -0.14
PTCD1-201ENST00000292478 TNFAIP1Q13829 316 aa14.17□□□□□ -0.14
PTCD1-201ENST00000292478 BRD3Q15059 726 aa14.17□□□□□ -0.14
PTCD1-201ENST00000292478 SPATA1Q5VX52 437 aa14.17□□□□□ -0.14
PTCD1-201ENST00000292478 TMC4Q7Z404 712 aa14.17□□□□□ -0.14
PTCD1-201ENST00000292478 NIM1KQ8IY84 436 aa14.17□□□□□ -0.14
PTCD1-201ENST00000292478 IFIH1Q9BYX4 1025 aaKnown RBP14.17□□□□□ -0.14
PTCD1-201ENST00000292478 AS3MTQ9HBK9 375 aa14.17□□□□□ -0.14
PTCD1-201ENST00000292478 FEZ2Q9UHY8 353 aaPredicted RBP14.17□□□□□ -0.14
PTCD1-201ENST00000292478 GJA3Q9Y6H8 435 aa14.17□□□□□ -0.14
PTCD1-201ENST00000292478 CFAP65Q6ZU64 1925 aaKnown RBP14.17□□□□□ -0.14
PTCD1-201ENST00000292478 PTCH1Q13635 1447 aa14.17□□□□□ -0.14
PTCD1-201ENST00000292478 NOP56O00567 594 aaKnown RBP14.17□□□□□ -0.14
PTCD1-201ENST00000292478 SCRN1Q12765 414 aa14.17□□□□□ -0.14
PTCD1-201ENST00000292478 PLCB1Q9NQ66 1216 aa14.17□□□□□ -0.14
PTCD1-201ENST00000292478 LEMD3Q9Y2U8 911 aa14.17□□□□□ -0.14
PTCD1-201ENST00000292478 MRPL11Q9Y3B7 192 aaKnown RBP14.17□□□□□ -0.14
PTCD1-201ENST00000292478 H0YCG3 227 aa14.16□□□□□ -0.14
PTCD1-201ENST00000292478 U2AF2P26368 475 aaKnown RBP eCLIP14.16□□□□□ -0.14
PTCD1-201ENST00000292478 TAOK1Q7L7X3 1001 aa14.16□□□□□ -0.14
PTCD1-201ENST00000292478 TRMT44Q8IYL2 757 aaKnown RBP14.16□□□□□ -0.14
PTCD1-201ENST00000292478 RNF26Q9BY78 433 aaPredicted RBP14.16□□□□□ -0.14
PTCD1-201ENST00000292478 PSTPIP2Q9H939 334 aa14.16□□□□□ -0.14
PTCD1-201ENST00000292478 GOLGA6CA6NDK9 693 aa14.16□□□□□ -0.14
PTCD1-201ENST00000292478 CEP104O60308 925 aa14.16□□□□□ -0.14
PTCD1-201ENST00000292478 GOLGA6DP0CG33 693 aa14.16□□□□□ -0.14
PTCD1-201ENST00000292478 GYG1P46976 350 aa14.16□□□□□ -0.14
PTCD1-201ENST00000292478 GTF2IP78347 998 aa14.16□□□□□ -0.14
PTCD1-201ENST00000292478 MAP3K9P80192 1104 aa14.16□□□□□ -0.14
PTCD1-201ENST00000292478 ELF2Q15723 593 aa14.16□□□□□ -0.14
PTCD1-201ENST00000292478 DDX17Q92841 729 aaKnown RBP14.16□□□□□ -0.14
PTCD1-201ENST00000292478 GOLGA6AQ9NYA3 693 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms