RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 MYH1P12882 1939 aa19.38■□□□□ 0.69
CPSF4-201ENST00000292476 ENTPD3O75355 529 aa19.37■□□□□ 0.69
CPSF4-201ENST00000292476 RASA1P20936 1047 aa19.37■□□□□ 0.69
CPSF4-201ENST00000292476 RPS12P25398 132 aaKnown RBP19.37■□□□□ 0.69
CPSF4-201ENST00000292476 DLGAP5Q15398 846 aa19.37■□□□□ 0.69
CPSF4-201ENST00000292476 NEDD1Q8NHV4 660 aa19.37■□□□□ 0.69
CPSF4-201ENST00000292476 NUP133Q8WUM0 1156 aa19.37■□□□□ 0.69
CPSF4-201ENST00000292476 CNOT7Q9UIV1 285 aaKnown RBP19.37■□□□□ 0.69
CPSF4-201ENST00000292476 KIF5BP33176 963 aa19.36■□□□□ 0.69
CPSF4-201ENST00000292476 SLC4A8Q2Y0W8 1093 aa19.36■□□□□ 0.69
CPSF4-201ENST00000292476 SASS6Q6UVJ0 657 aa19.36■□□□□ 0.69
CPSF4-201ENST00000292476 PNMA8AQ86V59 439 aaPredicted RBP19.36■□□□□ 0.69
CPSF4-201ENST00000292476 MICALL2Q8IY33 904 aa19.36■□□□□ 0.69
CPSF4-201ENST00000292476 MTMR14Q8NCE2 650 aa19.36■□□□□ 0.69
CPSF4-201ENST00000292476 CTCFLQ8NI51 663 aaPredicted RBP19.36■□□□□ 0.69
CPSF4-201ENST00000292476 C8orf76Q96K31 380 aa19.36■□□□□ 0.69
CPSF4-201ENST00000292476 DDX4Q9NQI0 724 aaKnown RBP19.36■□□□□ 0.69
CPSF4-201ENST00000292476 SPTLC3Q9NUV7 552 aa19.36■□□□□ 0.69
CPSF4-201ENST00000292476 PI4KBQ9UBF8 816 aa19.36■□□□□ 0.69
CPSF4-201ENST00000292476 CDC27P30260 824 aa19.36■□□□□ 0.69
CPSF4-201ENST00000292476 GABPAQ06546 454 aa19.36■□□□□ 0.69
CPSF4-201ENST00000292476 FSTL1Q12841 308 aa19.36■□□□□ 0.69
CPSF4-201ENST00000292476 TPRNQ4KMQ1 711 aa19.36■□□□□ 0.69
CPSF4-201ENST00000292476 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.36■□□□□ 0.69
CPSF4-201ENST00000292476 LDHDQ86WU2 507 aa19.36■□□□□ 0.69
CPSF4-201ENST00000292476 COL2A1P02458 1487 aaPredicted RBP19.35■□□□□ 0.69
CPSF4-201ENST00000292476 ADAMTSL1Q8N6G6 1762 aa19.35■□□□□ 0.69
CPSF4-201ENST00000292476 MYO1BO43795 1136 aa19.35■□□□□ 0.69
CPSF4-201ENST00000292476 NR1I2O75469 434 aa19.35■□□□□ 0.69
CPSF4-201ENST00000292476 FMNL1O95466 1100 aaPredicted RBP19.35■□□□□ 0.69
CPSF4-201ENST00000292476 FDPSP14324 419 aaKnown RBP19.35■□□□□ 0.69
CPSF4-201ENST00000292476 EVX2Q03828 476 aa19.35■□□□□ 0.69
CPSF4-201ENST00000292476 TRIM29Q14134 588 aa19.35■□□□□ 0.69
CPSF4-201ENST00000292476 NTRK3Q16288 839 aa19.35■□□□□ 0.69
CPSF4-201ENST00000292476 CHADLQ6NUI6 762 aa19.35■□□□□ 0.69
CPSF4-201ENST00000292476 RAB11FIP4Q86YS3 637 aa19.35■□□□□ 0.69
CPSF4-201ENST00000292476 FOXP4Q8IVH2 680 aaPredicted RBP19.35■□□□□ 0.69
CPSF4-201ENST00000292476 DPF2Q92785 391 aa19.35■□□□□ 0.69
CPSF4-201ENST00000292476 CCDC17Q96LX7 622 aa19.35■□□□□ 0.69
CPSF4-201ENST00000292476 MYL10Q9BUA6 226 aa19.35■□□□□ 0.69
CPSF4-201ENST00000292476 TRIM34Q9BYJ4 488 aa19.35■□□□□ 0.69
CPSF4-201ENST00000292476 ADARB2Q9NS39 739 aaKnown RBP19.35■□□□□ 0.69
CPSF4-201ENST00000292476 FAM217BQ9NTX9 383 aaPredicted RBP19.35■□□□□ 0.69
CPSF4-201ENST00000292476 R3HCC1Q9Y3T6 440 aaKnown RBP19.35■□□□□ 0.69
CPSF4-201ENST00000292476 SPDYE2BA6NHP3 402 aa19.34■□□□□ 0.69
CPSF4-201ENST00000292476 SPDYE6P0CI01 402 aa19.34■□□□□ 0.69
CPSF4-201ENST00000292476 RXRAP19793 462 aa19.34■□□□□ 0.69
CPSF4-201ENST00000292476 AKAP17AQ02040 695 aaKnown RBP19.34■□□□□ 0.69
CPSF4-201ENST00000292476 TROAPQ12815 778 aa19.34■□□□□ 0.69
CPSF4-201ENST00000292476 FKBP1CQ5VVH2 108 aa19.34■□□□□ 0.69
CPSF4-201ENST00000292476 CCDC144CPQ8IYA2 1237 aa19.34■□□□□ 0.69
CPSF4-201ENST00000292476 ECM29Q5VYK3 1845 aa19.34■□□□□ 0.69
CPSF4-201ENST00000292476 H7C1D1 291 aa19.33■□□□□ 0.69
CPSF4-201ENST00000292476 GNAQP50148 359 aa19.33■□□□□ 0.69
CPSF4-201ENST00000292476 CAMK4Q16566 473 aa19.33■□□□□ 0.69
CPSF4-201ENST00000292476 ANO6Q4KMQ2 910 aa19.33■□□□□ 0.69
CPSF4-201ENST00000292476 USP50Q70EL3 339 aaPredicted RBP19.33■□□□□ 0.69
CPSF4-201ENST00000292476 SAMD7Q7Z3H4 446 aa19.33■□□□□ 0.69
CPSF4-201ENST00000292476 CRACR2BQ8N4Y2 399 aaPredicted RBP19.33■□□□□ 0.69
CPSF4-201ENST00000292476 FBXO18Q8NFZ0 1043 aa19.33■□□□□ 0.69
CPSF4-201ENST00000292476 TRPM4Q8TD43 1214 aa19.33■□□□□ 0.69
CPSF4-201ENST00000292476 RNF26Q9BY78 433 aaPredicted RBP19.33■□□□□ 0.69
CPSF4-201ENST00000292476 CBX8Q9HC52 389 aa19.33■□□□□ 0.69
CPSF4-201ENST00000292476 PLIN4Q96Q06 1357 aa19.33■□□□□ 0.69
CPSF4-201ENST00000292476 DEXIO95424 95 aa19.33■□□□□ 0.68
CPSF4-201ENST00000292476 XBP1P17861 261 aa19.33■□□□□ 0.68
CPSF4-201ENST00000292476 NFIAQ12857 509 aa19.33■□□□□ 0.68
CPSF4-201ENST00000292476 RBM26Q5T8P6 1007 aaKnown RBP19.33■□□□□ 0.68
CPSF4-201ENST00000292476 RCSD1Q6JBY9 416 aa19.33■□□□□ 0.68
CPSF4-201ENST00000292476 CCDC73Q6ZRK6 1079 aa19.33■□□□□ 0.68
CPSF4-201ENST00000292476 ZSCAN29Q8IWY8 852 aaPredicted RBP19.33■□□□□ 0.68
CPSF4-201ENST00000292476 SLC44A5Q8NCS7 719 aa19.33■□□□□ 0.68
CPSF4-201ENST00000292476 PRMT6Q96LA8 375 aaPredicted RBP19.33■□□□□ 0.68
CPSF4-201ENST00000292476 ALG1Q9BT22 464 aa19.33■□□□□ 0.68
CPSF4-201ENST00000292476 TDRD3Q9H7E2 651 aaKnown RBP19.33■□□□□ 0.68
CPSF4-201ENST00000292476 IL17RBQ9NRM6 502 aa19.33■□□□□ 0.68
CPSF4-201ENST00000292476 AP5Z1O43299 807 aa19.32■□□□□ 0.68
CPSF4-201ENST00000292476 EGFRP00533 1210 aa19.32■□□□□ 0.68
CPSF4-201ENST00000292476 NOLC1Q14978 699 aaKnown RBP eCLIP19.32■□□□□ 0.68
CPSF4-201ENST00000292476 TBC1D10BQ4KMP7 808 aaPredicted RBP19.32■□□□□ 0.68
CPSF4-201ENST00000292476 MAP1SQ66K74 1059 aaPredicted RBP19.32■□□□□ 0.68
CPSF4-201ENST00000292476 BRAPQ7Z569 592 aa19.32■□□□□ 0.68
CPSF4-201ENST00000292476 PNMA1Q8ND90 353 aa19.32■□□□□ 0.68
CPSF4-201ENST00000292476 SLC26A6Q9BXS9 759 aa19.32■□□□□ 0.68
CPSF4-201ENST00000292476 RTEL1Q9NZ71 1219 aa19.32■□□□□ 0.68
CPSF4-201ENST00000292476 FAM198AQ9UFP1 575 aa19.32■□□□□ 0.68
CPSF4-201ENST00000292476 STX8Q9UNK0 236 aa19.32■□□□□ 0.68
CPSF4-201ENST00000292476 ATRNL1Q5VV63 1379 aa19.31■□□□□ 0.68
CPSF4-201ENST00000292476 A0A1W2PQ27 194 aa19.31■□□□□ 0.68
CPSF4-201ENST00000292476 A0A1W2PQ64 194 aa19.31■□□□□ 0.68
CPSF4-201ENST00000292476 A0A1W2PQD8 194 aa19.31■□□□□ 0.68
CPSF4-201ENST00000292476 DYNC1I1O14576 645 aa19.31■□□□□ 0.68
CPSF4-201ENST00000292476 NMT2O60551 498 aa19.31■□□□□ 0.68
CPSF4-201ENST00000292476 HSPA6P17066 643 aa19.31■□□□□ 0.68
CPSF4-201ENST00000292476 HIRAP54198 1017 aaPredicted RBP19.31■□□□□ 0.68
CPSF4-201ENST00000292476 FAM160A1Q05DH4 1040 aa19.31■□□□□ 0.68
CPSF4-201ENST00000292476 CKAP2LQ8IYA6 745 aa19.31■□□□□ 0.68
CPSF4-201ENST00000292476 PRIMPOLQ96LW4 560 aa19.31■□□□□ 0.68
CPSF4-201ENST00000292476 LZTS2Q9BRK4 669 aa19.31■□□□□ 0.68
CPSF4-201ENST00000292476 TOP1P11387 765 aaKnown RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms