RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 KBTBD3Q8NAB2 608 aa30.37■■■□□ 2.45
U2AF1-201ENST00000291552 PAWRQ96IZ0 340 aaKnown RBP30.37■■■□□ 2.45
U2AF1-201ENST00000291552 APBA2Q99767 749 aa30.37■■■□□ 2.45
U2AF1-201ENST00000291552 CCAR1Q8IX12 1150 aaKnown RBP30.36■■■□□ 2.45
U2AF1-201ENST00000291552 STRBPQ96SI9 672 aaKnown RBP30.36■■■□□ 2.45
U2AF1-201ENST00000291552 FXR1P51114 621 aaKnown RBP eCLIP30.35■■■□□ 2.45
U2AF1-201ENST00000291552 CCNA1P78396 465 aa30.35■■■□□ 2.45
U2AF1-201ENST00000291552 ICA1Q05084 483 aa30.35■■■□□ 2.45
U2AF1-201ENST00000291552 CACNB2Q08289 660 aaPredicted RBP30.35■■■□□ 2.45
U2AF1-201ENST00000291552 MAP2K5Q13163 448 aa30.35■■■□□ 2.45
U2AF1-201ENST00000291552 OSBP2Q969R2 916 aa30.35■■■□□ 2.45
U2AF1-201ENST00000291552 CHRDL2Q6WN34 429 aa30.34■■■□□ 2.45
U2AF1-201ENST00000291552 TRMT44Q8IYL2 757 aaKnown RBP30.34■■■□□ 2.45
U2AF1-201ENST00000291552 TANGO6Q9C0B7 1094 aa30.34■■■□□ 2.45
U2AF1-201ENST00000291552 ANKLE1Q8NAG6 615 aa30.33■■■□□ 2.45
U2AF1-201ENST00000291552 OTUD7AQ8TE49 926 aaPredicted RBP30.33■■■□□ 2.45
U2AF1-201ENST00000291552 CCDC17Q96LX7 622 aa30.33■■■□□ 2.45
U2AF1-201ENST00000291552 FLRT1Q9NZU1 646 aa30.33■■■□□ 2.45
U2AF1-201ENST00000291552 OGDHLQ9ULD0 1010 aa30.33■■■□□ 2.45
U2AF1-201ENST00000291552 TMX2Q9Y320 296 aa30.33■■■□□ 2.45
U2AF1-201ENST00000291552 ZNFX1Q9P2E3 1918 aaKnown RBP30.32■■■□□ 2.44
U2AF1-201ENST00000291552 SLC15A5A6NIM6 579 aa30.32■■■□□ 2.44
U2AF1-201ENST00000291552 GSG1L2A8MUP6 293 aa30.32■■■□□ 2.44
U2AF1-201ENST00000291552 PTPREP23469 700 aa30.32■■■□□ 2.44
U2AF1-201ENST00000291552 COG2Q14746 738 aa30.32■■■□□ 2.44
U2AF1-201ENST00000291552 WDR78Q5VTH9 848 aa30.32■■■□□ 2.44
U2AF1-201ENST00000291552 SPICE1Q8N0Z3 855 aa30.32■■■□□ 2.44
U2AF1-201ENST00000291552 GPATCH3Q96I76 525 aa30.32■■■□□ 2.44
U2AF1-201ENST00000291552 VCPKMTQ9H867 229 aa30.32■■■□□ 2.44
U2AF1-201ENST00000291552 ARHGEF10LQ9HCE6 1279 aa30.32■■■□□ 2.44
U2AF1-201ENST00000291552 CCND3P30281 292 aaPredicted RBP30.31■■■□□ 2.44
U2AF1-201ENST00000291552 RRP1P56182 461 aaKnown RBP30.31■■■□□ 2.44
U2AF1-201ENST00000291552 GRB14Q14449 540 aa30.31■■■□□ 2.44
U2AF1-201ENST00000291552 NECAB2Q7Z6G3 386 aa30.31■■■□□ 2.44
U2AF1-201ENST00000291552 AMOTL1Q8IY63 956 aa30.31■■■□□ 2.44
U2AF1-201ENST00000291552 APPBP2Q92624 585 aa30.31■■■□□ 2.44
U2AF1-201ENST00000291552 MOV10L1Q9BXT6 1211 aaKnown RBP30.31■■■□□ 2.44
U2AF1-201ENST00000291552 PRO3102Q9H379 93 aa30.31■■■□□ 2.44
U2AF1-201ENST00000291552 CWC22Q9HCG8 908 aaKnown RBP30.31■■■□□ 2.44
U2AF1-201ENST00000291552 ARPP21Q9UBL0 812 aaPredicted RBP30.31■■■□□ 2.44
U2AF1-201ENST00000291552 MYH4Q9Y623 1939 aa30.3■■■□□ 2.44
U2AF1-201ENST00000291552 RNF113AO15541 343 aaKnown RBP30.3■■■□□ 2.44
U2AF1-201ENST00000291552 LPAR1Q92633 364 aa30.3■■■□□ 2.44
U2AF1-201ENST00000291552 DDRGK1Q96HY6 314 aa30.3■■■□□ 2.44
U2AF1-201ENST00000291552 GNL3Q9BVP2 549 aaKnown RBP eCLIP30.3■■■□□ 2.44
U2AF1-201ENST00000291552 EPB41L4AQ9HCS5 686 aaPredicted RBP30.3■■■□□ 2.44
U2AF1-201ENST00000291552 NR2E3Q9Y5X4 410 aa30.3■■■□□ 2.44
U2AF1-201ENST00000291552 ROBO3Q96MS0 1386 aa30.29■■■□□ 2.44
U2AF1-201ENST00000291552 GLRX3O76003 335 aaKnown RBP30.29■■■□□ 2.44
U2AF1-201ENST00000291552 PI4K2BQ8TCG2 481 aa30.29■■■□□ 2.44
U2AF1-201ENST00000291552 M0R2C6 588 aa30.28■■■□□ 2.44
U2AF1-201ENST00000291552 HOXC6P09630 235 aa30.28■■■□□ 2.44
U2AF1-201ENST00000291552 EEF2P13639 858 aaKnown RBP30.28■■■□□ 2.44
U2AF1-201ENST00000291552 DSG3P32926 999 aa30.28■■■□□ 2.44
U2AF1-201ENST00000291552 SBK1Q52WX2 424 aa30.28■■■□□ 2.44
U2AF1-201ENST00000291552 LHX8Q68G74 356 aa30.28■■■□□ 2.44
U2AF1-201ENST00000291552 NPLOC4Q8TAT6 608 aa30.28■■■□□ 2.44
U2AF1-201ENST00000291552 ATG4CQ96DT6 458 aa30.28■■■□□ 2.44
U2AF1-201ENST00000291552 HOXC10Q9NYD6 342 aa30.28■■■□□ 2.44
U2AF1-201ENST00000291552 RBM27Q9P2N5 1060 aaKnown RBP30.28■■■□□ 2.44
U2AF1-201ENST00000291552 SZT2Q5T011 3432 aa30.28■■■□□ 2.44
U2AF1-201ENST00000291552 EVI5O60447 810 aa30.27■■■□□ 2.44
U2AF1-201ENST00000291552 IGHA2P01877 340 aa30.27■■■□□ 2.44
U2AF1-201ENST00000291552 SPATC1LQ9H0A9 340 aa30.27■■■□□ 2.44
U2AF1-201ENST00000291552 SH2D4AQ9H788 454 aa30.27■■■□□ 2.44
U2AF1-201ENST00000291552 TTC41PQ6P2S7 1318 aa30.26■■■□□ 2.44
U2AF1-201ENST00000291552 GPAA1O43292 621 aa30.26■■■□□ 2.43
U2AF1-201ENST00000291552 FLOT1O75955 427 aa30.26■■■□□ 2.43
U2AF1-201ENST00000291552 GIMAP6Q6P9H5 292 aa30.26■■■□□ 2.43
U2AF1-201ENST00000291552 NBPF3Q9H094 633 aa30.26■■■□□ 2.43
U2AF1-201ENST00000291552 IVNS1ABPQ9Y6Y0 642 aa30.26■■■□□ 2.43
U2AF1-201ENST00000291552 PFASO15067 1338 aa30.25■■■□□ 2.43
U2AF1-201ENST00000291552 WDR46O15213 610 aaKnown RBP30.25■■■□□ 2.43
U2AF1-201ENST00000291552 RASA1P20936 1047 aa30.25■■■□□ 2.43
U2AF1-201ENST00000291552 KANSL2Q9H9L4 492 aa30.25■■■□□ 2.43
U2AF1-201ENST00000291552 PCDH10Q9P2E7 1040 aa30.25■■■□□ 2.43
U2AF1-201ENST00000291552 SALL3Q9BXA9 1300 aa30.24■■■□□ 2.43
U2AF1-201ENST00000291552 ZFYP08048 801 aaPredicted RBP30.24■■■□□ 2.43
U2AF1-201ENST00000291552 ERCC3P19447 782 aa30.24■■■□□ 2.43
U2AF1-201ENST00000291552 MB21D1Q8N884 522 aa30.24■■■□□ 2.43
U2AF1-201ENST00000291552 SHCBP1Q8NEM2 672 aa30.24■■■□□ 2.43
U2AF1-201ENST00000291552 C11orf49Q9H6J7 331 aa30.24■■■□□ 2.43
U2AF1-201ENST00000291552 FBXO28Q9NVF7 368 aa30.24■■■□□ 2.43
U2AF1-201ENST00000291552 PLXNA1Q9UIW2 1896 aa30.23■■■□□ 2.43
U2AF1-201ENST00000291552 ATP2B2Q01814 1243 aa30.23■■■□□ 2.43
U2AF1-201ENST00000291552 STK11IPQ8N1F8 1099 aa30.23■■■□□ 2.43
U2AF1-201ENST00000291552 CRBNQ96SW2 442 aa30.23■■■□□ 2.43
U2AF1-201ENST00000291552 ADORA2AP29274 412 aa30.22■■■□□ 2.43
U2AF1-201ENST00000291552 TRPV1Q8NER1 839 aa30.22■■■□□ 2.43
U2AF1-201ENST00000291552 SEC62Q99442 399 aaKnown RBP30.22■■■□□ 2.43
U2AF1-201ENST00000291552 DNAH12Q6ZR08 3092 aa30.21■■■□□ 2.43
U2AF1-201ENST00000291552 MINDY4BA8MYZ0 360 aa30.21■■■□□ 2.43
U2AF1-201ENST00000291552 COL6A1P12109 1028 aa30.21■■■□□ 2.43
U2AF1-201ENST00000291552 CYP2C19P33261 490 aa30.21■■■□□ 2.43
U2AF1-201ENST00000291552 MFSD14CQ5VZR4 134 aa30.21■■■□□ 2.43
U2AF1-201ENST00000291552 C7orf61Q8IZ16 206 aa30.21■■■□□ 2.43
U2AF1-201ENST00000291552 ADAMTS5Q9UNA0 930 aa30.21■■■□□ 2.43
U2AF1-201ENST00000291552 TMEM132BQ14DG7 1078 aa30.2■■■□□ 2.43
U2AF1-201ENST00000291552 SAMD1Q6SPF0 538 aaPredicted RBP30.2■■■□□ 2.43
U2AF1-201ENST00000291552 ERC2O15083 957 aa30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms