RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 ADD2P35612 726 aa10.69□□□□□ -0.7
TFF1-201ENST00000291527 WDR78Q5VTH9 848 aa10.69□□□□□ -0.7
TFF1-201ENST00000291527 TSHZ3Q63HK5 1081 aa10.69□□□□□ -0.7
TFF1-201ENST00000291527 TTC6Q86TZ1 520 aa10.69□□□□□ -0.7
TFF1-201ENST00000291527 SPICE1Q8N0Z3 855 aa10.69□□□□□ -0.7
TFF1-201ENST00000291527 STK11IPQ8N1F8 1099 aa10.69□□□□□ -0.7
TFF1-201ENST00000291527 YTHDC1Q96MU7 727 aaKnown RBP10.69□□□□□ -0.7
TFF1-201ENST00000291527 MOV10L1Q9BXT6 1211 aaKnown RBP10.69□□□□□ -0.7
TFF1-201ENST00000291527 MCM3APO60318 1980 aa10.68□□□□□ -0.7
TFF1-201ENST00000291527 RGS2P41220 211 aa10.68□□□□□ -0.7
TFF1-201ENST00000291527 GRB14Q14449 540 aa10.68□□□□□ -0.7
TFF1-201ENST00000291527 SAMD1Q6SPF0 538 aaPredicted RBP10.68□□□□□ -0.7
TFF1-201ENST00000291527 LBX2Q6XYB7 198 aa10.68□□□□□ -0.7
TFF1-201ENST00000291527 ERC1Q8IUD2 1116 aa10.68□□□□□ -0.7
TFF1-201ENST00000291527 ANKLE1Q8NAG6 615 aa10.68□□□□□ -0.7
TFF1-201ENST00000291527 SOCS4Q8WXH5 440 aa10.68□□□□□ -0.7
TFF1-201ENST00000291527 ATG4CQ96DT6 458 aa10.68□□□□□ -0.7
TFF1-201ENST00000291527 KIF1BPQ96EK5 621 aa10.68□□□□□ -0.7
TFF1-201ENST00000291527 APBA2Q99767 749 aa10.68□□□□□ -0.7
TFF1-201ENST00000291527 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.68□□□□□ -0.7
TFF1-201ENST00000291527 CRNKL1Q9BZJ0 848 aaKnown RBP10.68□□□□□ -0.7
TFF1-201ENST00000291527 PUS7LQ9H0K6 701 aaKnown RBP10.68□□□□□ -0.7
TFF1-201ENST00000291527 FBXO28Q9NVF7 368 aa10.68□□□□□ -0.7
TFF1-201ENST00000291527 PAG1Q9NWQ8 432 aa10.68□□□□□ -0.7
TFF1-201ENST00000291527 GREB1LQ9C091 1923 aaPredicted RBP10.68□□□□□ -0.7
TFF1-201ENST00000291527 LTBP2Q14767 1821 aa10.68□□□□□ -0.7
TFF1-201ENST00000291527 MYH4Q9Y623 1939 aa10.67□□□□□ -0.7
TFF1-201ENST00000291527 SLC15A5A6NIM6 579 aa10.67□□□□□ -0.7
TFF1-201ENST00000291527 USP17L12C9JPN9 530 aa10.67□□□□□ -0.7
TFF1-201ENST00000291527 USP17L21D6R901 530 aa10.67□□□□□ -0.7
TFF1-201ENST00000291527 IFIT2P09913 472 aaKnown RBP10.67□□□□□ -0.7
TFF1-201ENST00000291527 ATP5JP18859 108 aa10.67□□□□□ -0.7
TFF1-201ENST00000291527 CDK8P49336 464 aa10.67□□□□□ -0.7
TFF1-201ENST00000291527 ATN1P54259 1190 aaPredicted RBP10.67□□□□□ -0.7
TFF1-201ENST00000291527 MDM2Q00987 491 aaPredicted RBP10.67□□□□□ -0.7
TFF1-201ENST00000291527 PDE3AQ14432 1141 aa10.67□□□□□ -0.7
TFF1-201ENST00000291527 RPAP2Q8IXW5 612 aaPredicted RBP10.67□□□□□ -0.7
TFF1-201ENST00000291527 CLASRPQ8N2M8 674 aaKnown RBP10.67□□□□□ -0.7
TFF1-201ENST00000291527 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.67□□□□□ -0.7
TFF1-201ENST00000291527 HAUS7Q99871 368 aa10.67□□□□□ -0.7
TFF1-201ENST00000291527 CABP5Q9NP86 173 aa10.67□□□□□ -0.7
TFF1-201ENST00000291527 CUL9Q8IWT3 2517 aa10.67□□□□□ -0.7
TFF1-201ENST00000291527 ZNF236Q9UL36 1845 aa10.66□□□□□ -0.7
TFF1-201ENST00000291527 ERCC3P19447 782 aa10.66□□□□□ -0.7
TFF1-201ENST00000291527 ADORA2AP29274 412 aa10.66□□□□□ -0.7
TFF1-201ENST00000291527 CNGA1P29973 690 aa10.66□□□□□ -0.7
TFF1-201ENST00000291527 DSG3P32926 999 aa10.66□□□□□ -0.7
TFF1-201ENST00000291527 BMP8BP34820 402 aa10.66□□□□□ -0.7
TFF1-201ENST00000291527 USP14P54578 494 aa10.66□□□□□ -0.7
TFF1-201ENST00000291527 TMEM132BQ14DG7 1078 aa10.66□□□□□ -0.7
TFF1-201ENST00000291527 TTF1Q15361 905 aaPredicted RBP10.66□□□□□ -0.7
TFF1-201ENST00000291527 GJC2Q5T442 439 aaPredicted RBP10.66□□□□□ -0.7
TFF1-201ENST00000291527 C12orf60Q5U649 245 aa10.66□□□□□ -0.7
TFF1-201ENST00000291527 CTR9Q6PD62 1173 aa10.66□□□□□ -0.7
TFF1-201ENST00000291527 CCAR1Q8IX12 1150 aaKnown RBP10.66□□□□□ -0.7
TFF1-201ENST00000291527 NUP88Q99567 741 aaPredicted RBP10.66□□□□□ -0.7
TFF1-201ENST00000291527 TANGO6Q9C0B7 1094 aa10.66□□□□□ -0.7
TFF1-201ENST00000291527 SENP6Q9GZR1 1112 aaPredicted RBP10.66□□□□□ -0.7
TFF1-201ENST00000291527 SPATC1LQ9H0A9 340 aa10.66□□□□□ -0.7
TFF1-201ENST00000291527 IGSF3O75054 1194 aa10.65□□□□□ -0.7
TFF1-201ENST00000291527 HOXC6P09630 235 aa10.65□□□□□ -0.7
TFF1-201ENST00000291527 CYBAP13498 195 aa10.65□□□□□ -0.7
TFF1-201ENST00000291527 EEF2P13639 858 aaKnown RBP10.65□□□□□ -0.7
TFF1-201ENST00000291527 TAL1P17542 331 aaPredicted RBP10.65□□□□□ -0.7
TFF1-201ENST00000291527 IRX5P78411 483 aaPredicted RBP10.65□□□□□ -0.7
TFF1-201ENST00000291527 ATP2B2Q01814 1243 aa10.65□□□□□ -0.7
TFF1-201ENST00000291527 COG2Q14746 738 aa10.65□□□□□ -0.7
TFF1-201ENST00000291527 HSP90AB4PQ58FF6 505 aa10.65□□□□□ -0.7
TFF1-201ENST00000291527 DDX20Q9UHI6 824 aaKnown RBP10.65□□□□□ -0.7
TFF1-201ENST00000291527 RCAN3Q9UKA8 241 aa10.65□□□□□ -0.7
TFF1-201ENST00000291527 TMX2Q9Y320 296 aa10.65□□□□□ -0.7
TFF1-201ENST00000291527 RAB11FIP3O75154 756 aa10.64□□□□□ -0.71
TFF1-201ENST00000291527 PGK2P07205 417 aa10.64□□□□□ -0.71
TFF1-201ENST00000291527 PLS1Q14651 629 aa10.64□□□□□ -0.71
TFF1-201ENST00000291527 TMEM179Q6ZVK1 233 aa10.64□□□□□ -0.71
TFF1-201ENST00000291527 C16orf86Q6ZW13 317 aa10.64□□□□□ -0.71
TFF1-201ENST00000291527 SH3RF1Q7Z6J0 888 aa10.64□□□□□ -0.71
TFF1-201ENST00000291527 REPS2Q8NFH8 660 aa10.64□□□□□ -0.71
TFF1-201ENST00000291527 OTUD7AQ8TE49 926 aaPredicted RBP10.64□□□□□ -0.71
TFF1-201ENST00000291527 GTF3C2Q8WUA4 911 aaPredicted RBP10.64□□□□□ -0.71
TFF1-201ENST00000291527 OSBP2Q969R2 916 aa10.64□□□□□ -0.71
TFF1-201ENST00000291527 LENG1Q96BZ8 264 aaPredicted RBP10.64□□□□□ -0.71
TFF1-201ENST00000291527 CWC22Q9HCG8 908 aaKnown RBP10.64□□□□□ -0.71
TFF1-201ENST00000291527 DDX19BQ9UMR2 479 aa10.64□□□□□ -0.71
TFF1-201ENST00000291527 SLC4A4Q9Y6R1 1079 aa10.64□□□□□ -0.71
TFF1-201ENST00000291527 SPTBN5Q9NRC6 3674 aaKnown RBP10.64□□□□□ -0.71
TFF1-201ENST00000291527 GSG1L2A8MUP6 293 aa10.63□□□□□ -0.71
TFF1-201ENST00000291527 M0R2C6 588 aa10.63□□□□□ -0.71
TFF1-201ENST00000291527 FLOT1O75955 427 aa10.63□□□□□ -0.71
TFF1-201ENST00000291527 ICA1Q05084 483 aa10.63□□□□□ -0.71
TFF1-201ENST00000291527 MFSD14CQ5VZR4 134 aa10.63□□□□□ -0.71
TFF1-201ENST00000291527 NCAPG2Q86XI2 1143 aa10.63□□□□□ -0.71
TFF1-201ENST00000291527 TRMT44Q8IYL2 757 aaKnown RBP10.63□□□□□ -0.71
TFF1-201ENST00000291527 FERMT2Q96AC1 680 aa10.63□□□□□ -0.71
TFF1-201ENST00000291527 CHMP4CQ96CF2 233 aa10.63□□□□□ -0.71
TFF1-201ENST00000291527 STRBPQ96SI9 672 aaKnown RBP10.63□□□□□ -0.71
TFF1-201ENST00000291527 SEC62Q99442 399 aaKnown RBP10.63□□□□□ -0.71
TFF1-201ENST00000291527 UBE2OQ9C0C9 1292 aaKnown RBP10.63□□□□□ -0.71
TFF1-201ENST00000291527 VCPKMTQ9H867 229 aa10.63□□□□□ -0.71
TFF1-201ENST00000291527 EPB41L4AQ9HCS5 686 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms