RNA–Protein interactions for RNA: ENST00000289488.6

LRTOMT-201, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 2,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-201ENST00000289488 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.22□□□□□ -0.61
LRTOMT-201ENST00000289488 TAOK2Q9UL54 1235 aa11.22□□□□□ -0.61
LRTOMT-201ENST00000289488 ATRNL1Q5VV63 1379 aa11.22□□□□□ -0.61
LRTOMT-201ENST00000289488 CCDC69A6NI79 296 aa11.21□□□□□ -0.61
LRTOMT-201ENST00000289488 UBE2Q2LH0YL09 131 aa11.21□□□□□ -0.61
LRTOMT-201ENST00000289488 GRIN3BO60391 1043 aa11.21□□□□□ -0.61
LRTOMT-201ENST00000289488 PFKFB2O60825 505 aa11.21□□□□□ -0.61
LRTOMT-201ENST00000289488 GDF11O95390 407 aa11.21□□□□□ -0.61
LRTOMT-201ENST00000289488 LIFRP42702 1097 aa11.21□□□□□ -0.61
LRTOMT-201ENST00000289488 IFIT1BQ5T764 474 aaKnown RBP11.21□□□□□ -0.61
LRTOMT-201ENST00000289488 SGMS1Q86VZ5 419 aa11.21□□□□□ -0.61
LRTOMT-201ENST00000289488 CCDC82Q8N4S0 544 aa11.21□□□□□ -0.61
LRTOMT-201ENST00000289488 NUP133Q8WUM0 1156 aa11.21□□□□□ -0.61
LRTOMT-201ENST00000289488 FAM151AQ8WW52 585 aa11.21□□□□□ -0.61
LRTOMT-201ENST00000289488 ZNF274Q96GC6 653 aaPredicted RBP11.21□□□□□ -0.61
LRTOMT-201ENST00000289488 CEP95Q96GE4 821 aa11.21□□□□□ -0.61
LRTOMT-201ENST00000289488 SLC12A7Q9Y666 1083 aa11.21□□□□□ -0.61
LRTOMT-201ENST00000289488 TCHHQ07283 1943 aa11.21□□□□□ -0.61
LRTOMT-201ENST00000289488 MPHOSPH10O00566 681 aaKnown RBP11.21□□□□□ -0.62
LRTOMT-201ENST00000289488 NPM3O75607 178 aaKnown RBP11.21□□□□□ -0.62
LRTOMT-201ENST00000289488 GJB2P29033 226 aa11.21□□□□□ -0.62
LRTOMT-201ENST00000289488 SYCP1Q15431 976 aa11.21□□□□□ -0.62
LRTOMT-201ENST00000289488 DEFB129Q9H1M3 183 aa11.21□□□□□ -0.62
LRTOMT-201ENST00000289488 KCNF1Q9H3M0 494 aa11.21□□□□□ -0.62
LRTOMT-201ENST00000289488 GGA3Q9NZ52 723 aa11.21□□□□□ -0.62
LRTOMT-201ENST00000289488 OGFRQ9NZT2 677 aa11.21□□□□□ -0.62
LRTOMT-201ENST00000289488 PGAP2Q9UHJ9 254 aa11.21□□□□□ -0.62
LRTOMT-201ENST00000289488 ZNF654Q8IZM8 581 aa11.2□□□□□ -0.62
LRTOMT-201ENST00000289488 TEPSINQ96N21 525 aa11.2□□□□□ -0.62
LRTOMT-201ENST00000289488 EHD4Q9H223 541 aa11.2□□□□□ -0.62
LRTOMT-201ENST00000289488 FAM217BQ9NTX9 383 aaPredicted RBP11.2□□□□□ -0.62
LRTOMT-201ENST00000289488 PYCARDQ9ULZ3 195 aa11.2□□□□□ -0.62
LRTOMT-201ENST00000289488 ZBTB43O43298 467 aa11.2□□□□□ -0.62
LRTOMT-201ENST00000289488 METAP2P50579 478 aaKnown RBP eCLIP11.2□□□□□ -0.62
LRTOMT-201ENST00000289488 GABPB1Q06547 395 aaPredicted RBP11.2□□□□□ -0.62
LRTOMT-201ENST00000289488 DPY19L2Q6NUT2 758 aa11.2□□□□□ -0.62
LRTOMT-201ENST00000289488 BBXQ8WY36 941 aaPredicted RBP11.2□□□□□ -0.62
LRTOMT-201ENST00000289488 FUCA2Q9BTY2 467 aa11.2□□□□□ -0.62
LRTOMT-201ENST00000289488 ZNF287Q9HBT7 754 aa11.2□□□□□ -0.62
LRTOMT-201ENST00000289488 SMC3Q9UQE7 1217 aa11.2□□□□□ -0.62
LRTOMT-201ENST00000289488 MYH4Q9Y623 1939 aa11.2□□□□□ -0.62
LRTOMT-201ENST00000289488 GOLGA6L6A8MZA4 724 aa11.19□□□□□ -0.62
LRTOMT-201ENST00000289488 LMOD1P29536 600 aaPredicted RBP11.19□□□□□ -0.62
LRTOMT-201ENST00000289488 FOSBP53539 338 aa11.19□□□□□ -0.62
LRTOMT-201ENST00000289488 UBE2HP62256 183 aa11.19□□□□□ -0.62
LRTOMT-201ENST00000289488 TROAPQ12815 778 aa11.19□□□□□ -0.62
LRTOMT-201ENST00000289488 CERKLQ49MI3 558 aaPredicted RBP11.19□□□□□ -0.62
LRTOMT-201ENST00000289488 NBPF12Q5TAG4 269 aaPredicted RBP11.19□□□□□ -0.62
LRTOMT-201ENST00000289488 FKBP1CQ5VVH2 108 aa11.19□□□□□ -0.62
LRTOMT-201ENST00000289488 FAM83AQ86UY5 434 aa11.19□□□□□ -0.62
LRTOMT-201ENST00000289488 NSUN7Q8NE18 718 aaKnown RBP11.19□□□□□ -0.62
LRTOMT-201ENST00000289488 NEDD1Q8NHV4 660 aa11.19□□□□□ -0.62
LRTOMT-201ENST00000289488 PHKBQ93100 1093 aa11.19□□□□□ -0.62
LRTOMT-201ENST00000289488 TRIM34Q9BYJ4 488 aa11.19□□□□□ -0.62
LRTOMT-201ENST00000289488 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.19□□□□□ -0.62
LRTOMT-201ENST00000289488 FOXD4L6Q3SYB3 417 aaPredicted RBP11.19□□□□□ -0.62
LRTOMT-201ENST00000289488 TATDN1Q6P1N9 297 aa11.19□□□□□ -0.62
LRTOMT-201ENST00000289488 FOXD4L3Q6VB84 417 aaPredicted RBP11.19□□□□□ -0.62
LRTOMT-201ENST00000289488 FOXP4Q8IVH2 680 aaPredicted RBP11.19□□□□□ -0.62
LRTOMT-201ENST00000289488 TMEM47Q9BQJ4 181 aa11.19□□□□□ -0.62
LRTOMT-201ENST00000289488 SWAP70Q9UH65 585 aa11.19□□□□□ -0.62
LRTOMT-201ENST00000289488 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.19□□□□□ -0.62
LRTOMT-201ENST00000289488 PTPDC1A2A3K4 754 aa11.18□□□□□ -0.62
LRTOMT-201ENST00000289488 GLTPD2A6NH11 291 aa11.18□□□□□ -0.62
LRTOMT-201ENST00000289488 GOLGA8AA7E2F4 631 aa11.18□□□□□ -0.62
LRTOMT-201ENST00000289488 POTECB2RU33 542 aa11.18□□□□□ -0.62
LRTOMT-201ENST00000289488 ATP2B2Q01814 1243 aa11.18□□□□□ -0.62
LRTOMT-201ENST00000289488 NCBP1Q09161 790 aaKnown RBP11.18□□□□□ -0.62
LRTOMT-201ENST00000289488 ZNF771Q7L3S4 317 aaPredicted RBP11.18□□□□□ -0.62
LRTOMT-201ENST00000289488 CCDC84Q86UT8 332 aaPredicted RBP11.18□□□□□ -0.62
LRTOMT-201ENST00000289488 METTL16Q86W50 562 aaKnown RBP11.18□□□□□ -0.62
LRTOMT-201ENST00000289488 LRRC47Q8N1G4 583 aaKnown RBP11.18□□□□□ -0.62
LRTOMT-201ENST00000289488 PNMA1Q8ND90 353 aa11.18□□□□□ -0.62
LRTOMT-201ENST00000289488 GJB4Q9NTQ9 266 aa11.18□□□□□ -0.62
LRTOMT-201ENST00000289488 MTMR4Q9NYA4 1195 aa11.18□□□□□ -0.62
LRTOMT-201ENST00000289488 GREB1LQ9C091 1923 aaPredicted RBP11.18□□□□□ -0.62
LRTOMT-201ENST00000289488 hCG_1642624A0A1W2PR95 340 aa11.18□□□□□ -0.62
LRTOMT-201ENST00000289488 GH2P01242 217 aa11.18□□□□□ -0.62
LRTOMT-201ENST00000289488 POTEIP0CG38 1075 aa11.18□□□□□ -0.62
LRTOMT-201ENST00000289488 POTEJP0CG39 1038 aa11.18□□□□□ -0.62
LRTOMT-201ENST00000289488 FDPSP14324 419 aaKnown RBP11.18□□□□□ -0.62
LRTOMT-201ENST00000289488 SEPT2Q15019 361 aa11.18□□□□□ -0.62
LRTOMT-201ENST00000289488 FANCBQ8NB91 859 aa11.18□□□□□ -0.62
LRTOMT-201ENST00000289488 ADARB2Q9NS39 739 aaKnown RBP11.18□□□□□ -0.62
LRTOMT-201ENST00000289488 CLIP2Q9UDT6 1046 aa11.18□□□□□ -0.62
LRTOMT-201ENST00000289488 MYH6P13533 1939 aa11.17□□□□□ -0.62
LRTOMT-201ENST00000289488 CPLX1O14810 134 aa11.17□□□□□ -0.62
LRTOMT-201ENST00000289488 AP5Z1O43299 807 aa11.17□□□□□ -0.62
LRTOMT-201ENST00000289488 PLEKHA8P1O95397 391 aa11.17□□□□□ -0.62
LRTOMT-201ENST00000289488 GOLGA8HP0CJ92 632 aa11.17□□□□□ -0.62
LRTOMT-201ENST00000289488 SYT1P21579 422 aa11.17□□□□□ -0.62
LRTOMT-201ENST00000289488 GUCY1A2P33402 732 aa11.17□□□□□ -0.62
LRTOMT-201ENST00000289488 TNFAIP1Q13829 316 aa11.17□□□□□ -0.62
LRTOMT-201ENST00000289488 NTRK3Q16288 839 aa11.17□□□□□ -0.62
LRTOMT-201ENST00000289488 CATIPQ7Z7H3 387 aa11.17□□□□□ -0.62
LRTOMT-201ENST00000289488 DGKHQ86XP1 1220 aa11.17□□□□□ -0.62
LRTOMT-201ENST00000289488 TMTC2Q8N394 836 aa11.17□□□□□ -0.62
LRTOMT-201ENST00000289488 STAG2Q8N3U4 1231 aa11.17□□□□□ -0.62
LRTOMT-201ENST00000289488 AIFM3Q96NN9 605 aa11.17□□□□□ -0.62
LRTOMT-201ENST00000289488 CPVLQ9H3G5 476 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms