RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 COL2A1P02458 1487 aaPredicted RBP11.72□□□□□ -0.53
C9orf43-201ENST00000288462 MYH4Q9Y623 1939 aa11.72□□□□□ -0.53
C9orf43-201ENST00000288462 BAZ2BQ9UIF8 2168 aaKnown RBP11.71□□□□□ -0.53
C9orf43-201ENST00000288462 TOP1P11387 765 aaKnown RBP11.71□□□□□ -0.53
C9orf43-201ENST00000288462 CCDC93Q567U6 631 aa11.71□□□□□ -0.53
C9orf43-201ENST00000288462 RESP18Q5W5W9 173 aa11.71□□□□□ -0.53
C9orf43-201ENST00000288462 KIAA0825Q8IV33 1275 aa11.71□□□□□ -0.53
C9orf43-201ENST00000288462 LZTS2Q9BRK4 669 aa11.71□□□□□ -0.53
C9orf43-201ENST00000288462 BRMS1Q9HCU9 246 aa11.71□□□□□ -0.53
C9orf43-201ENST00000288462 SH3GLB2Q9NR46 395 aa11.71□□□□□ -0.53
C9orf43-201ENST00000288462 SERPINB13Q9UIV8 391 aa11.71□□□□□ -0.53
C9orf43-201ENST00000288462 SERPINA10Q9UK55 444 aa11.71□□□□□ -0.53
C9orf43-201ENST00000288462 YDJCA8MPS7 323 aa11.71□□□□□ -0.54
C9orf43-201ENST00000288462 C21orf2O43822 256 aa11.71□□□□□ -0.54
C9orf43-201ENST00000288462 NPM3O75607 178 aaKnown RBP11.71□□□□□ -0.54
C9orf43-201ENST00000288462 KCNA3P22001 575 aa11.71□□□□□ -0.54
C9orf43-201ENST00000288462 NFIAQ12857 509 aa11.71□□□□□ -0.54
C9orf43-201ENST00000288462 SHC4Q6S5L8 630 aa11.71□□□□□ -0.54
C9orf43-201ENST00000288462 SASS6Q6UVJ0 657 aa11.71□□□□□ -0.54
C9orf43-201ENST00000288462 FAM177A1Q8N128 213 aaPredicted RBP11.71□□□□□ -0.54
C9orf43-201ENST00000288462 TTLL6Q8N841 843 aa11.71□□□□□ -0.54
C9orf43-201ENST00000288462 PSMD1Q99460 953 aa11.71□□□□□ -0.54
C9orf43-201ENST00000288462 SPZ1Q9BXG8 430 aa11.71□□□□□ -0.54
C9orf43-201ENST00000288462 IDI2Q9BXS1 227 aa11.71□□□□□ -0.54
C9orf43-201ENST00000288462 ARFGEF1Q9Y6D6 1849 aa11.7□□□□□ -0.54
C9orf43-201ENST00000288462 FAM205CA6NFA0 338 aa11.7□□□□□ -0.54
C9orf43-201ENST00000288462 PPIP5K2O43314 1243 aa11.7□□□□□ -0.54
C9orf43-201ENST00000288462 CAVIN2O95810 425 aa11.7□□□□□ -0.54
C9orf43-201ENST00000288462 SHMT1P34896 483 aa11.7□□□□□ -0.54
C9orf43-201ENST00000288462 ANO6Q4KMQ2 910 aa11.7□□□□□ -0.54
C9orf43-201ENST00000288462 RTKN2Q8IZC4 609 aa11.7□□□□□ -0.54
C9orf43-201ENST00000288462 FAM43AQ8N2R8 423 aa11.7□□□□□ -0.54
C9orf43-201ENST00000288462 KRI1Q8N9T8 703 aaKnown RBP11.7□□□□□ -0.54
C9orf43-201ENST00000288462 TIGD1Q96MW7 591 aa11.7□□□□□ -0.54
C9orf43-201ENST00000288462 FBXO2Q9UK22 296 aaPredicted RBP11.7□□□□□ -0.54
C9orf43-201ENST00000288462 CEP131Q9UPN4 1083 aa11.7□□□□□ -0.54
C9orf43-201ENST00000288462 PCDHB6Q9Y5E3 794 aa11.7□□□□□ -0.54
C9orf43-201ENST00000288462 CYTH3O43739 400 aa11.69□□□□□ -0.54
C9orf43-201ENST00000288462 HLA-DOAP06340 250 aa11.69□□□□□ -0.54
C9orf43-201ENST00000288462 AKR1B1P15121 316 aa11.69□□□□□ -0.54
C9orf43-201ENST00000288462 PTPREP23469 700 aa11.69□□□□□ -0.54
C9orf43-201ENST00000288462 STX1AQ16623 288 aa11.69□□□□□ -0.54
C9orf43-201ENST00000288462 EARS2Q5JPH6 523 aaKnown RBP11.69□□□□□ -0.54
C9orf43-201ENST00000288462 TRIM44Q96DX7 344 aaPredicted RBP11.69□□□□□ -0.54
C9orf43-201ENST00000288462 CABP5Q9NP86 173 aa11.69□□□□□ -0.54
C9orf43-201ENST00000288462 MTMR4Q9NYA4 1195 aa11.69□□□□□ -0.54
C9orf43-201ENST00000288462 PCDHAC2Q9Y5I4 1007 aa11.69□□□□□ -0.54
C9orf43-201ENST00000288462 FER1L6Q2WGJ9 1857 aa11.69□□□□□ -0.54
C9orf43-201ENST00000288462 ZNF202O95125 648 aa11.69□□□□□ -0.54
C9orf43-201ENST00000288462 VEGFAP15692 232 aaPredicted RBP11.69□□□□□ -0.54
C9orf43-201ENST00000288462 DPEP1P16444 411 aa11.69□□□□□ -0.54
C9orf43-201ENST00000288462 CALML3P27482 149 aa11.69□□□□□ -0.54
C9orf43-201ENST00000288462 SMARCA1P28370 1054 aa11.69□□□□□ -0.54
C9orf43-201ENST00000288462 HS1BP3Q53T59 392 aa11.69□□□□□ -0.54
C9orf43-201ENST00000288462 RASGRP2Q7LDG7 609 aa11.69□□□□□ -0.54
C9orf43-201ENST00000288462 FAM198AQ9UFP1 575 aa11.69□□□□□ -0.54
C9orf43-201ENST00000288462 USP25Q9UHP3 1055 aa11.69□□□□□ -0.54
C9orf43-201ENST00000288462 ATRNL1Q5VV63 1379 aa11.68□□□□□ -0.54
C9orf43-201ENST00000288462 TRIM75PA6NK02 468 aa11.68□□□□□ -0.54
C9orf43-201ENST00000288462 PARP1P09874 1014 aaKnown RBP11.68□□□□□ -0.54
C9orf43-201ENST00000288462 ZNF579Q8NAF0 562 aaKnown RBP11.68□□□□□ -0.54
C9orf43-201ENST00000288462 DAGLBQ8NCG7 672 aa11.68□□□□□ -0.54
C9orf43-201ENST00000288462 CLIC6Q96NY7 704 aa11.68□□□□□ -0.54
C9orf43-201ENST00000288462 DHX36Q9H2U1 1008 aaKnown RBP11.68□□□□□ -0.54
C9orf43-201ENST00000288462 CBX8Q9HC52 389 aa11.68□□□□□ -0.54
C9orf43-201ENST00000288462 NOL7Q9UMY1 257 aaKnown RBP11.68□□□□□ -0.54
C9orf43-201ENST00000288462 KLRF2D3W0D1 207 aa11.68□□□□□ -0.54
C9orf43-201ENST00000288462 BMP15O95972 392 aa11.68□□□□□ -0.54
C9orf43-201ENST00000288462 SNHG28P0DPA3 235 aa11.68□□□□□ -0.54
C9orf43-201ENST00000288462 SYKP43405 635 aa11.68□□□□□ -0.54
C9orf43-201ENST00000288462 TRAPPC10P48553 1259 aa11.68□□□□□ -0.54
C9orf43-201ENST00000288462 NLRP5P59047 1200 aa11.68□□□□□ -0.54
C9orf43-201ENST00000288462 WWC2Q6AWC2 1192 aa11.68□□□□□ -0.54
C9orf43-201ENST00000288462 ZFPM1Q8IX07 1006 aa11.68□□□□□ -0.54
C9orf43-201ENST00000288462 DNAJC25Q9H1X3 360 aa11.68□□□□□ -0.54
C9orf43-201ENST00000288462 DNAJC18Q9H819 358 aa11.68□□□□□ -0.54
C9orf43-201ENST00000288462 SRPRBQ9Y5M8 271 aaKnown RBP11.68□□□□□ -0.54
C9orf43-201ENST00000288462 M0R2N6 131 aa11.67□□□□□ -0.54
C9orf43-201ENST00000288462 STXBP3O00186 592 aa11.67□□□□□ -0.54
C9orf43-201ENST00000288462 PDHBP11177 359 aa11.67□□□□□ -0.54
C9orf43-201ENST00000288462 NOM1Q5C9Z4 860 aaKnown RBP11.67□□□□□ -0.54
C9orf43-201ENST00000288462 GALNT17Q6IS24 598 aa11.67□□□□□ -0.54
C9orf43-201ENST00000288462 TYW1BQ6NUM6 668 aa11.67□□□□□ -0.54
C9orf43-201ENST00000288462 CCDC148Q8NFR7 591 aa11.67□□□□□ -0.54
C9orf43-201ENST00000288462 GPKOWQ92917 476 aaPredicted RBP eCLIP11.67□□□□□ -0.54
C9orf43-201ENST00000288462 SDF4Q9BRK5 362 aa11.67□□□□□ -0.54
C9orf43-201ENST00000288462 VPS33BQ9H267 617 aa11.67□□□□□ -0.54
C9orf43-201ENST00000288462 BARHL2Q9NY43 387 aa11.67□□□□□ -0.54
C9orf43-201ENST00000288462 PCDHA4Q9UN74 947 aa11.67□□□□□ -0.54
C9orf43-201ENST00000288462 WNT7AO00755 349 aa11.66□□□□□ -0.54
C9orf43-201ENST00000288462 TTLL1O95922 423 aa11.66□□□□□ -0.54
C9orf43-201ENST00000288462 GOLGA8HP0CJ92 632 aa11.66□□□□□ -0.54
C9orf43-201ENST00000288462 ZNF165P49910 485 aa11.66□□□□□ -0.54
C9orf43-201ENST00000288462 CACNB3P54284 484 aa11.66□□□□□ -0.54
C9orf43-201ENST00000288462 ASPRV1Q53RT3 343 aa11.66□□□□□ -0.54
C9orf43-201ENST00000288462 USP17L2Q6R6M4 530 aa11.66□□□□□ -0.54
C9orf43-201ENST00000288462 C11orf57Q6ZUT1 292 aaPredicted RBP11.66□□□□□ -0.54
C9orf43-201ENST00000288462 SH3BP5LQ7L8J4 393 aa11.66□□□□□ -0.54
C9orf43-201ENST00000288462 LUZP1Q86V48 1076 aa11.66□□□□□ -0.54
C9orf43-201ENST00000288462 BLIDQ8IZY5 108 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms