RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 AKR1B15C9JRZ8 316 aaPredicted RBP11.76□□□□□ -0.53
SKA1-201ENST00000285116 CCDC175P0C221 793 aa11.76□□□□□ -0.53
SKA1-201ENST00000285116 GUCY1A2P33402 732 aa11.76□□□□□ -0.53
SKA1-201ENST00000285116 IL6STP40189 918 aaPredicted RBP11.76□□□□□ -0.53
SKA1-201ENST00000285116 GOLGA8FQ08AF8 430 aa11.76□□□□□ -0.53
SKA1-201ENST00000285116 GOLGA8DPQ0D2H9 430 aa11.76□□□□□ -0.53
SKA1-201ENST00000285116 RASGRF1Q13972 1273 aa11.76□□□□□ -0.53
SKA1-201ENST00000285116 BEND6Q5SZJ8 279 aaPredicted RBP11.76□□□□□ -0.53
SKA1-201ENST00000285116 SRGAP1Q7Z6B7 1085 aa11.76□□□□□ -0.53
SKA1-201ENST00000285116 FANCBQ8NB91 859 aa11.76□□□□□ -0.53
SKA1-201ENST00000285116 PDE11AQ9HCR9 933 aa11.76□□□□□ -0.53
SKA1-201ENST00000285116 FGRP09769 529 aa11.76□□□□□ -0.53
SKA1-201ENST00000285116 CHMP4BP1P59074 171 aa11.76□□□□□ -0.53
SKA1-201ENST00000285116 TTC31Q49AM3 519 aaPredicted RBP11.76□□□□□ -0.53
SKA1-201ENST00000285116 TOGARAM2Q6ZUX3 1019 aa11.76□□□□□ -0.53
SKA1-201ENST00000285116 MAGEB6Q8N7X4 407 aa11.76□□□□□ -0.53
SKA1-201ENST00000285116 PHF20Q9BVI0 1012 aa11.76□□□□□ -0.53
SKA1-201ENST00000285116 ADD3Q9UEY8 706 aaKnown RBP11.76□□□□□ -0.53
SKA1-201ENST00000285116 RAB21Q9UL25 225 aa11.76□□□□□ -0.53
SKA1-201ENST00000285116 PCDHB6Q9Y5E3 794 aa11.76□□□□□ -0.53
SKA1-201ENST00000285116 ERICH2A1L162 156 aa11.75□□□□□ -0.53
SKA1-201ENST00000285116 EXOC5O00471 708 aa11.75□□□□□ -0.53
SKA1-201ENST00000285116 PRPF3O43395 683 aaKnown RBP11.75□□□□□ -0.53
SKA1-201ENST00000285116 CTDSPL2Q05D32 466 aa11.75□□□□□ -0.53
SKA1-201ENST00000285116 FUT2Q10981 343 aa11.75□□□□□ -0.53
SKA1-201ENST00000285116 SEMA3FQ13275 785 aa11.75□□□□□ -0.53
SKA1-201ENST00000285116 RASGRP2Q7LDG7 609 aa11.75□□□□□ -0.53
SKA1-201ENST00000285116 ZNF654Q8IZM8 581 aa11.75□□□□□ -0.53
SKA1-201ENST00000285116 SYNE4Q8N205 404 aa11.75□□□□□ -0.53
SKA1-201ENST00000285116 CEP112Q8N8E3 955 aa11.75□□□□□ -0.53
SKA1-201ENST00000285116 LRRC10BA6NIK2 292 aa11.75□□□□□ -0.53
SKA1-201ENST00000285116 XBP1P17861 261 aa11.75□□□□□ -0.53
SKA1-201ENST00000285116 GRIN1Q05586 938 aa11.75□□□□□ -0.53
SKA1-201ENST00000285116 DPYDQ12882 1025 aa11.75□□□□□ -0.53
SKA1-201ENST00000285116 MSANTD4Q8NCY6 345 aa11.75□□□□□ -0.53
SKA1-201ENST00000285116 CCDC12Q8WUD4 166 aaPredicted RBP11.75□□□□□ -0.53
SKA1-201ENST00000285116 TNFRSF25Q93038 417 aa11.75□□□□□ -0.53
SKA1-201ENST00000285116 MYL10Q9BUA6 226 aa11.75□□□□□ -0.53
SKA1-201ENST00000285116 RBM28Q9NW13 759 aaKnown RBP11.75□□□□□ -0.53
SKA1-201ENST00000285116 MYO1AQ9UBC5 1043 aa11.75□□□□□ -0.53
SKA1-201ENST00000285116 TRMT112Q9UI30 125 aaKnown RBP11.75□□□□□ -0.53
SKA1-201ENST00000285116 ROBO1Q9Y6N7 1651 aa11.75□□□□□ -0.53
SKA1-201ENST00000285116 DOT1LQ8TEK3 1739 aa11.74□□□□□ -0.53
SKA1-201ENST00000285116 TRIM75PA6NK02 468 aa11.74□□□□□ -0.53
SKA1-201ENST00000285116 MCM6Q14566 821 aa11.74□□□□□ -0.53
SKA1-201ENST00000285116 DDB1Q16531 1140 aa11.74□□□□□ -0.53
SKA1-201ENST00000285116 CSRNP2Q9H175 543 aa11.74□□□□□ -0.53
SKA1-201ENST00000285116 ADGRG1Q9Y653 693 aa11.74□□□□□ -0.53
SKA1-201ENST00000285116 ZNF804BA4D1E1 1349 aa11.74□□□□□ -0.53
SKA1-201ENST00000285116 SYNRGQ9UMZ2 1314 aa11.74□□□□□ -0.53
SKA1-201ENST00000285116 TUBBP07437 444 aa11.74□□□□□ -0.53
SKA1-201ENST00000285116 GPTP24298 496 aa11.74□□□□□ -0.53
SKA1-201ENST00000285116 NT5C2P49902 561 aa11.74□□□□□ -0.53
SKA1-201ENST00000285116 BICDL1Q6ZP65 573 aa11.74□□□□□ -0.53
SKA1-201ENST00000285116 PDILTQ8N807 584 aa11.74□□□□□ -0.53
SKA1-201ENST00000285116 ZFP91Q96JP5 570 aaPredicted RBP11.74□□□□□ -0.53
SKA1-201ENST00000285116 ANKZF1Q9H8Y5 726 aa11.74□□□□□ -0.53
SKA1-201ENST00000285116 ARMT1Q9H993 441 aa11.74□□□□□ -0.53
SKA1-201ENST00000285116 L1RE1Q9UN81 338 aa11.74□□□□□ -0.53
SKA1-201ENST00000285116 UBE2Q2LH0YL09 131 aa11.73□□□□□ -0.53
SKA1-201ENST00000285116 CALM1P0DP23 149 aa11.73□□□□□ -0.53
SKA1-201ENST00000285116 CALM2P0DP24 149 aa11.73□□□□□ -0.53
SKA1-201ENST00000285116 CALM3P0DP25 149 aa11.73□□□□□ -0.53
SKA1-201ENST00000285116 TRAPPC10P48553 1259 aa11.73□□□□□ -0.53
SKA1-201ENST00000285116 TRIM14Q14142 442 aa11.73□□□□□ -0.53
SKA1-201ENST00000285116 CNGA4Q8IV77 575 aa11.73□□□□□ -0.53
SKA1-201ENST00000285116 MARCH10Q8NA82 808 aaPredicted RBP11.73□□□□□ -0.53
SKA1-201ENST00000285116 PPM1EQ8WY54 764 aa11.73□□□□□ -0.53
SKA1-201ENST00000285116 PAGE5Q96GU1 130 aa11.73□□□□□ -0.53
SKA1-201ENST00000285116 LIMA1Q9UHB6 759 aaKnown RBP11.73□□□□□ -0.53
SKA1-201ENST00000285116 KCNJ14Q9UNX9 436 aa11.73□□□□□ -0.53
SKA1-201ENST00000285116 JRKLQ9Y4A0 524 aa11.73□□□□□ -0.53
SKA1-201ENST00000285116 AFF2P51816 1311 aa11.73□□□□□ -0.53
SKA1-201ENST00000285116 EIF3CLB5ME19 914 aaKnown RBP11.73□□□□□ -0.53
SKA1-201ENST00000285116 MFAP3LO75121 409 aa11.73□□□□□ -0.53
SKA1-201ENST00000285116 GUCY2CP25092 1073 aa11.73□□□□□ -0.53
SKA1-201ENST00000285116 KRT2P35908 639 aa11.73□□□□□ -0.53
SKA1-201ENST00000285116 PPARAQ07869 468 aa11.73□□□□□ -0.53
SKA1-201ENST00000285116 PKN1Q16512 942 aa11.73□□□□□ -0.53
SKA1-201ENST00000285116 LCORLQ8N3X6 602 aa11.73□□□□□ -0.53
SKA1-201ENST00000285116 EIF3CQ99613 913 aaKnown RBP11.73□□□□□ -0.53
SKA1-201ENST00000285116 GBP3Q9H0R5 595 aa11.73□□□□□ -0.53
SKA1-201ENST00000285116 SAMSN1Q9NSI8 373 aaKnown RBP11.73□□□□□ -0.53
SKA1-201ENST00000285116 TTF2Q9UNY4 1162 aaKnown RBP11.73□□□□□ -0.53
SKA1-201ENST00000285116 SLC4A4Q9Y6R1 1079 aa11.73□□□□□ -0.53
SKA1-201ENST00000285116 PPP1R3GB7ZBB8 358 aa11.73□□□□□ -0.53
SKA1-201ENST00000285116 ADKP55263 362 aaKnown RBP11.73□□□□□ -0.53
SKA1-201ENST00000285116 HSP90B2PQ58FF3 399 aa11.73□□□□□ -0.53
SKA1-201ENST00000285116 FAM71BQ8TC56 605 aa11.73□□□□□ -0.53
SKA1-201ENST00000285116 ESR2Q92731 530 aa11.73□□□□□ -0.53
SKA1-201ENST00000285116 SLC4A9Q96Q91 983 aa11.73□□□□□ -0.53
SKA1-201ENST00000285116 QTRT2Q9H974 415 aaKnown RBP11.73□□□□□ -0.53
SKA1-201ENST00000285116 CDC23Q9UJX2 597 aa11.73□□□□□ -0.53
SKA1-201ENST00000285116 FAN1Q9Y2M0 1017 aa11.73□□□□□ -0.53
SKA1-201ENST00000285116 DDAH1O94760 285 aa11.72□□□□□ -0.53
SKA1-201ENST00000285116 TDO2P48775 406 aa11.72□□□□□ -0.53
SKA1-201ENST00000285116 SPAG1Q07617 926 aa11.72□□□□□ -0.53
SKA1-201ENST00000285116 NR5A1Q13285 461 aa11.72□□□□□ -0.53
SKA1-201ENST00000285116 PACS2Q86VP3 889 aa11.72□□□□□ -0.53
SKA1-201ENST00000285116 SHISA4Q96DD7 197 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms