RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 UTRNP46939 3433 aa13.23□□□□□ -0.29
XRCC4-201ENST00000282268 TBC1D12O60347 775 aa13.23□□□□□ -0.29
XRCC4-201ENST00000282268 PDCP20941 246 aa13.23□□□□□ -0.29
XRCC4-201ENST00000282268 KIF5BP33176 963 aa13.23□□□□□ -0.29
XRCC4-201ENST00000282268 AKAP17AQ02040 695 aaKnown RBP13.23□□□□□ -0.29
XRCC4-201ENST00000282268 GRM4Q14833 912 aa13.23□□□□□ -0.29
XRCC4-201ENST00000282268 TMTC3Q6ZXV5 915 aa13.23□□□□□ -0.29
XRCC4-201ENST00000282268 FERMT3Q86UX7 667 aa13.23□□□□□ -0.29
XRCC4-201ENST00000282268 SULF1Q8IWU6 871 aa13.23□□□□□ -0.29
XRCC4-201ENST00000282268 SRBD1Q8N5C6 995 aaKnown RBP13.23□□□□□ -0.29
XRCC4-201ENST00000282268 ZNF526Q8TF50 670 aaPredicted RBP13.23□□□□□ -0.29
XRCC4-201ENST00000282268 ALG1Q9BT22 464 aa13.23□□□□□ -0.29
XRCC4-201ENST00000282268 CPVLQ9H3G5 476 aa13.23□□□□□ -0.29
XRCC4-201ENST00000282268 KANSL2Q9H9L4 492 aa13.23□□□□□ -0.29
XRCC4-201ENST00000282268 GPCPD1Q9NPB8 672 aa13.23□□□□□ -0.29
XRCC4-201ENST00000282268 GJB4Q9NTQ9 266 aa13.23□□□□□ -0.29
XRCC4-201ENST00000282268 MYH8P13535 1937 aa13.23□□□□□ -0.29
XRCC4-201ENST00000282268 FMNL1O95466 1100 aaPredicted RBP13.22□□□□□ -0.29
XRCC4-201ENST00000282268 BRD1O95696 1058 aa13.22□□□□□ -0.29
XRCC4-201ENST00000282268 PARP1P09874 1014 aaKnown RBP13.22□□□□□ -0.29
XRCC4-201ENST00000282268 ZSCAN22P10073 491 aaPredicted RBP13.22□□□□□ -0.29
XRCC4-201ENST00000282268 IFNAR1P17181 557 aa13.22□□□□□ -0.29
XRCC4-201ENST00000282268 CAP2P40123 477 aa13.22□□□□□ -0.29
XRCC4-201ENST00000282268 RCAN1P53805 252 aa13.22□□□□□ -0.29
XRCC4-201ENST00000282268 NBR1Q14596 966 aa13.22□□□□□ -0.29
XRCC4-201ENST00000282268 ZYXQ15942 572 aaKnown RBP13.22□□□□□ -0.29
XRCC4-201ENST00000282268 CCDC96Q2M329 555 aa13.22□□□□□ -0.29
XRCC4-201ENST00000282268 MCTP1Q6DN14 999 aa13.22□□□□□ -0.29
XRCC4-201ENST00000282268 CDC37L1Q7L3B6 337 aa13.22□□□□□ -0.29
XRCC4-201ENST00000282268 NBPF11Q86T75 865 aa13.22□□□□□ -0.29
XRCC4-201ENST00000282268 USP48Q86UV5 1035 aa13.22□□□□□ -0.29
XRCC4-201ENST00000282268 TRIM22Q8IYM9 498 aa13.22□□□□□ -0.29
XRCC4-201ENST00000282268 C8orf76Q96K31 380 aa13.22□□□□□ -0.29
XRCC4-201ENST00000282268 TAF1DQ9H5J8 278 aaPredicted RBP13.22□□□□□ -0.29
XRCC4-201ENST00000282268 VAT1LQ9HCJ6 419 aa13.22□□□□□ -0.29
XRCC4-201ENST00000282268 MAD2L2Q9UI95 211 aa13.22□□□□□ -0.29
XRCC4-201ENST00000282268 ZBTB21Q9ULJ3 1066 aa13.22□□□□□ -0.29
XRCC4-201ENST00000282268 MTMR6Q9Y217 621 aa13.22□□□□□ -0.29
XRCC4-201ENST00000282268 KIF3AQ9Y496 699 aa13.22□□□□□ -0.29
XRCC4-201ENST00000282268 V9GY48 417 aaPredicted RBP13.22□□□□□ -0.29
XRCC4-201ENST00000282268 ZC3H4Q9UPT8 1303 aaKnown RBP13.22□□□□□ -0.29
XRCC4-201ENST00000282268 NID2Q14112 1375 aa13.22□□□□□ -0.29
XRCC4-201ENST00000282268 IQCA1LA6NCM1 817 aa13.21□□□□□ -0.29
XRCC4-201ENST00000282268 POTECB2RU33 542 aa13.21□□□□□ -0.29
XRCC4-201ENST00000282268 DCAF15Q66K64 600 aa13.21□□□□□ -0.29
XRCC4-201ENST00000282268 USP50Q70EL3 339 aaPredicted RBP13.21□□□□□ -0.29
XRCC4-201ENST00000282268 KRT26Q7Z3Y9 468 aa13.21□□□□□ -0.29
XRCC4-201ENST00000282268 SIAH1Q8IUQ4 282 aa13.21□□□□□ -0.29
XRCC4-201ENST00000282268 UBA5Q9GZZ9 404 aa13.21□□□□□ -0.29
XRCC4-201ENST00000282268 RRAGCQ9HB90 399 aa13.21□□□□□ -0.29
XRCC4-201ENST00000282268 NYAP2Q9P242 653 aa13.21□□□□□ -0.29
XRCC4-201ENST00000282268 PHF20L1A8MW92 1017 aa13.21□□□□□ -0.3
XRCC4-201ENST00000282268 INPP5BP32019 993 aa13.21□□□□□ -0.3
XRCC4-201ENST00000282268 ECE1P42892 770 aa13.21□□□□□ -0.3
XRCC4-201ENST00000282268 NOVP48745 357 aa13.21□□□□□ -0.3
XRCC4-201ENST00000282268 PPP2R5BQ15173 497 aa13.21□□□□□ -0.3
XRCC4-201ENST00000282268 PPP4R3BQ5MIZ7 849 aa13.21□□□□□ -0.3
XRCC4-201ENST00000282268 ACER1Q8TDN7 264 aa13.21□□□□□ -0.3
XRCC4-201ENST00000282268 ZNF341Q9BYN7 854 aa13.21□□□□□ -0.3
XRCC4-201ENST00000282268 ARHGEF10LQ9HCE6 1279 aa13.21□□□□□ -0.3
XRCC4-201ENST00000282268 KLRF2D3W0D1 207 aa13.2□□□□□ -0.3
XRCC4-201ENST00000282268 PDHBP11177 359 aa13.2□□□□□ -0.3
XRCC4-201ENST00000282268 MAP3K10Q02779 954 aa13.2□□□□□ -0.3
XRCC4-201ENST00000282268 SUPT20HL1Q3ZLR7 823 aa13.2□□□□□ -0.3
XRCC4-201ENST00000282268 SLFN13Q68D06 897 aa13.2□□□□□ -0.3
XRCC4-201ENST00000282268 KCTD1Q719H9 257 aa13.2□□□□□ -0.3
XRCC4-201ENST00000282268 SPICE1Q8N0Z3 855 aa13.2□□□□□ -0.3
XRCC4-201ENST00000282268 ZKSCAN4Q969J2 545 aaPredicted RBP13.2□□□□□ -0.3
XRCC4-201ENST00000282268 HOOK2Q96ED9 719 aa13.2□□□□□ -0.3
XRCC4-201ENST00000282268 WRNIP1Q96S55 665 aa13.2□□□□□ -0.3
XRCC4-201ENST00000282268 NUP88Q99567 741 aaPredicted RBP13.2□□□□□ -0.3
XRCC4-201ENST00000282268 PITPNM2Q9BZ72 1349 aa13.2□□□□□ -0.3
XRCC4-201ENST00000282268 PPP2R3BQ9Y5P8 575 aa13.2□□□□□ -0.3
XRCC4-201ENST00000282268 CNTNAP5Q8WYK1 1306 aa13.19□□□□□ -0.3
XRCC4-201ENST00000282268 A0A1W2PRG0 241 aa13.19□□□□□ -0.3
XRCC4-201ENST00000282268 PALM3A6NDB9 673 aaPredicted RBP13.19□□□□□ -0.3
XRCC4-201ENST00000282268 F13A1P00488 732 aa13.19□□□□□ -0.3
XRCC4-201ENST00000282268 POTEIP0CG38 1075 aa13.19□□□□□ -0.3
XRCC4-201ENST00000282268 POTEJP0CG39 1038 aa13.19□□□□□ -0.3
XRCC4-201ENST00000282268 GNAQP50148 359 aa13.19□□□□□ -0.3
XRCC4-201ENST00000282268 FUT2Q10981 343 aa13.19□□□□□ -0.3
XRCC4-201ENST00000282268 TRIM29Q14134 588 aa13.19□□□□□ -0.3
XRCC4-201ENST00000282268 NFKBIBQ15653 356 aa13.19□□□□□ -0.3
XRCC4-201ENST00000282268 TTBK2Q6IQ55 1244 aa13.19□□□□□ -0.3
XRCC4-201ENST00000282268 WASF1Q92558 559 aa13.19□□□□□ -0.3
XRCC4-201ENST00000282268 MAP3K14Q99558 947 aa13.19□□□□□ -0.3
XRCC4-201ENST00000282268 GLIS2Q9BZE0 524 aaPredicted RBP13.19□□□□□ -0.3
XRCC4-201ENST00000282268 STK36Q9NRP7 1315 aa13.18□□□□□ -0.3
XRCC4-201ENST00000282268 F5H6K3 240 aa13.18□□□□□ -0.3
XRCC4-201ENST00000282268 PRPF3O43395 683 aaKnown RBP13.18□□□□□ -0.3
XRCC4-201ENST00000282268 DEXIO95424 95 aa13.18□□□□□ -0.3
XRCC4-201ENST00000282268 NCLP19338 710 aaKnown RBP13.18□□□□□ -0.3
XRCC4-201ENST00000282268 SLC16A2P36021 539 aa13.18□□□□□ -0.3
XRCC4-201ENST00000282268 SLC1A4P43007 532 aa13.18□□□□□ -0.3
XRCC4-201ENST00000282268 KLRC3Q07444 240 aa13.18□□□□□ -0.3
XRCC4-201ENST00000282268 FAM173BQ6P4H8 233 aa13.18□□□□□ -0.3
XRCC4-201ENST00000282268 SAMD1Q6SPF0 538 aaPredicted RBP13.18□□□□□ -0.3
XRCC4-201ENST00000282268 HOMER1Q86YM7 354 aa13.18□□□□□ -0.3
XRCC4-201ENST00000282268 FEZ1Q99689 392 aa13.18□□□□□ -0.3
XRCC4-201ENST00000282268 RNF26Q9BY78 433 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms