RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 USP17L2Q6R6M4 530 aa20.59■□□□□ 0.89
CAPN1-201ENST00000279247 SLF2Q8IX21 1173 aa20.59■□□□□ 0.89
CAPN1-201ENST00000279247 GRAMD1CQ8IYS0 662 aa20.59■□□□□ 0.89
CAPN1-201ENST00000279247 CEP57L1Q8IYX8 460 aa20.59■□□□□ 0.89
CAPN1-201ENST00000279247 CNNM3Q8NE01 707 aa20.59■□□□□ 0.89
CAPN1-201ENST00000279247 BRMS1Q9HCU9 246 aa20.59■□□□□ 0.89
CAPN1-201ENST00000279247 DDX4Q9NQI0 724 aaKnown RBP20.59■□□□□ 0.89
CAPN1-201ENST00000279247 USP40Q9NVE5 1235 aa20.59■□□□□ 0.89
CAPN1-201ENST00000279247 NRBP1Q9UHY1 535 aa20.59■□□□□ 0.89
CAPN1-201ENST00000279247 H0YIN7 160 aa20.59■□□□□ 0.89
CAPN1-201ENST00000279247 PLCG2P16885 1265 aa20.59■□□□□ 0.89
CAPN1-201ENST00000279247 HEATR3Q7Z4Q2 680 aa20.59■□□□□ 0.89
CAPN1-201ENST00000279247 KIAA1551Q9HCM1 1747 aa20.59■□□□□ 0.89
CAPN1-201ENST00000279247 PSDA5PKW4 1024 aaPredicted RBP20.59■□□□□ 0.89
CAPN1-201ENST00000279247 POLR2DO15514 142 aaKnown RBP20.59■□□□□ 0.89
CAPN1-201ENST00000279247 HS1BP3Q53T59 392 aa20.59■□□□□ 0.89
CAPN1-201ENST00000279247 TRIM75PA6NK02 468 aa20.58■□□□□ 0.89
CAPN1-201ENST00000279247 FAM196BA6NMK8 535 aa20.58■□□□□ 0.89
CAPN1-201ENST00000279247 IQCB1Q15051 598 aa20.58■□□□□ 0.89
CAPN1-201ENST00000279247 CEP95Q96GE4 821 aa20.58■□□□□ 0.89
CAPN1-201ENST00000279247 MAST2Q6P0Q8 1798 aa20.58■□□□□ 0.88
CAPN1-201ENST00000279247 CUTAO60888 179 aa20.58■□□□□ 0.88
CAPN1-201ENST00000279247 DGKHQ86XP1 1220 aa20.58■□□□□ 0.88
CAPN1-201ENST00000279247 PTGS1P23219 599 aa20.57■□□□□ 0.88
CAPN1-201ENST00000279247 R3HDM1Q15032 1099 aaKnown RBP20.57■□□□□ 0.88
CAPN1-201ENST00000279247 RESP18Q5W5W9 173 aa20.57■□□□□ 0.88
CAPN1-201ENST00000279247 CSRNP2Q9H175 543 aa20.57■□□□□ 0.88
CAPN1-201ENST00000279247 LAMB1P07942 1786 aa20.57■□□□□ 0.88
CAPN1-201ENST00000279247 MCM7P33993 719 aa20.57■□□□□ 0.88
CAPN1-201ENST00000279247 TMC4Q7Z404 712 aa20.56■□□□□ 0.88
CAPN1-201ENST00000279247 LRRC47Q8N1G4 583 aaKnown RBP20.56■□□□□ 0.88
CAPN1-201ENST00000279247 UBA5Q9GZZ9 404 aa20.56■□□□□ 0.88
CAPN1-201ENST00000279247 FBXO2Q9UK22 296 aaPredicted RBP20.56■□□□□ 0.88
CAPN1-201ENST00000279247 MPHOSPH10O00566 681 aaKnown RBP20.56■□□□□ 0.88
CAPN1-201ENST00000279247 NFIAQ12857 509 aa20.56■□□□□ 0.88
CAPN1-201ENST00000279247 HSP90AA4PQ58FG1 418 aa20.56■□□□□ 0.88
CAPN1-201ENST00000279247 EPSTI1Q96J88 318 aa20.56■□□□□ 0.88
CAPN1-201ENST00000279247 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.56■□□□□ 0.88
CAPN1-201ENST00000279247 MAD2L2Q9UI95 211 aa20.56■□□□□ 0.88
CAPN1-201ENST00000279247 FRMPD2Q68DX3 1309 aaPredicted RBP20.56■□□□□ 0.88
CAPN1-201ENST00000279247 FAM205AQ6ZU69 1335 aa20.56■□□□□ 0.88
CAPN1-201ENST00000279247 NPY5RQ15761 445 aa20.56■□□□□ 0.88
CAPN1-201ENST00000279247 TYW1BQ6NUM6 668 aa20.56■□□□□ 0.88
CAPN1-201ENST00000279247 C16orf86Q6ZW13 317 aa20.56■□□□□ 0.88
CAPN1-201ENST00000279247 DHX40Q8IX18 779 aaKnown RBP20.56■□□□□ 0.88
CAPN1-201ENST00000279247 CYTH3O43739 400 aa20.55■□□□□ 0.88
CAPN1-201ENST00000279247 C21orf2O43822 256 aa20.55■□□□□ 0.88
CAPN1-201ENST00000279247 PFKFB3Q16875 520 aaPredicted RBP20.55■□□□□ 0.88
CAPN1-201ENST00000279247 SLC35G1Q2M3R5 365 aa20.55■□□□□ 0.88
CAPN1-201ENST00000279247 ZNF287Q9HBT7 754 aa20.55■□□□□ 0.88
CAPN1-201ENST00000279247 FAM13BQ9NYF5 915 aa20.55■□□□□ 0.88
CAPN1-201ENST00000279247 SERTAD1Q9UHV2 236 aa20.55■□□□□ 0.88
CAPN1-201ENST00000279247 VWA3AA6NCI4 1184 aa20.55■□□□□ 0.88
CAPN1-201ENST00000279247 KLRF2D3W0D1 207 aa20.55■□□□□ 0.88
CAPN1-201ENST00000279247 ZNF75DP51815 510 aa20.55■□□□□ 0.88
CAPN1-201ENST00000279247 KIAA2012Q0VF49 1180 aa20.55■□□□□ 0.88
CAPN1-201ENST00000279247 AOC3Q16853 763 aa20.55■□□□□ 0.88
CAPN1-201ENST00000279247 CCDC186Q7Z3E2 898 aa20.55■□□□□ 0.88
CAPN1-201ENST00000279247 ZSCAN29Q8IWY8 852 aaPredicted RBP20.55■□□□□ 0.88
CAPN1-201ENST00000279247 HPSEQ9Y251 543 aa20.55■□□□□ 0.88
CAPN1-201ENST00000279247 GAKO14976 1311 aa20.55■□□□□ 0.88
CAPN1-201ENST00000279247 PTPREP23469 700 aa20.54■□□□□ 0.88
CAPN1-201ENST00000279247 METTL16Q86W50 562 aaKnown RBP20.54■□□□□ 0.88
CAPN1-201ENST00000279247 NAV1Q8NEY1 1877 aa20.54■□□□□ 0.88
CAPN1-201ENST00000279247 TTC38Q5R3I4 469 aa20.54■□□□□ 0.88
CAPN1-201ENST00000279247 ZFPM1Q8IX07 1006 aa20.54■□□□□ 0.88
CAPN1-201ENST00000279247 STAMQ92783 540 aa20.54■□□□□ 0.88
CAPN1-201ENST00000279247 DHX58Q96C10 678 aa20.54■□□□□ 0.88
CAPN1-201ENST00000279247 CLIP2Q9UDT6 1046 aa20.54■□□□□ 0.88
CAPN1-201ENST00000279247 AKR1B1P15121 316 aa20.53■□□□□ 0.88
CAPN1-201ENST00000279247 NAT10Q9H0A0 1025 aaKnown RBP20.53■□□□□ 0.88
CAPN1-201ENST00000279247 CASP1P29466 404 aa20.53■□□□□ 0.88
CAPN1-201ENST00000279247 AFMP43652 599 aa20.53■□□□□ 0.88
CAPN1-201ENST00000279247 PTGDRQ13258 359 aa20.53■□□□□ 0.88
CAPN1-201ENST00000279247 DNTTIP2Q5QJE6 756 aaKnown RBP20.53■□□□□ 0.88
CAPN1-201ENST00000279247 CDC42EP5Q6NZY7 148 aa20.53■□□□□ 0.88
CAPN1-201ENST00000279247 TMED8Q6PL24 325 aaPredicted RBP20.53■□□□□ 0.88
CAPN1-201ENST00000279247 KRBA2Q6ZNG9 492 aa20.53■□□□□ 0.88
CAPN1-201ENST00000279247 TEKT1Q969V4 418 aa20.53■□□□□ 0.88
CAPN1-201ENST00000279247 CEP131Q9UPN4 1083 aa20.53■□□□□ 0.88
CAPN1-201ENST00000279247 PCDHA5Q9Y5H7 936 aa20.53■□□□□ 0.88
CAPN1-201ENST00000279247 HMGB2P26583 209 aaKnown RBP20.53■□□□□ 0.88
CAPN1-201ENST00000279247 CDC25AP30304 524 aa20.53■□□□□ 0.88
CAPN1-201ENST00000279247 LRMPQ12912 555 aa20.53■□□□□ 0.88
CAPN1-201ENST00000279247 GRM4Q14833 912 aa20.53■□□□□ 0.88
CAPN1-201ENST00000279247 FILIP1Q7Z7B0 1213 aa20.53■□□□□ 0.88
CAPN1-201ENST00000279247 FOXP4Q8IVH2 680 aaPredicted RBP20.53■□□□□ 0.88
CAPN1-201ENST00000279247 FAM163AQ96GL9 167 aaPredicted RBP20.53■□□□□ 0.88
CAPN1-201ENST00000279247 PRR29P0C7W0 189 aa20.52■□□□□ 0.88
CAPN1-201ENST00000279247 LMOD1P29536 600 aaPredicted RBP20.52■□□□□ 0.88
CAPN1-201ENST00000279247 MYH1P12882 1939 aa20.52■□□□□ 0.88
CAPN1-201ENST00000279247 USP17L5A8MUK1 530 aa20.52■□□□□ 0.88
CAPN1-201ENST00000279247 ECE2O60344 883 aa20.52■□□□□ 0.88
CAPN1-201ENST00000279247 WWC2Q6AWC2 1192 aa20.52■□□□□ 0.88
CAPN1-201ENST00000279247 SNED1Q8TER0 1413 aa20.52■□□□□ 0.87
CAPN1-201ENST00000279247 COL11A2P13942 1736 aaPredicted RBP20.51■□□□□ 0.87
CAPN1-201ENST00000279247 NEDD1Q8NHV4 660 aa20.51■□□□□ 0.87
CAPN1-201ENST00000279247 ROBO3Q96MS0 1386 aa20.51■□□□□ 0.87
CAPN1-201ENST00000279247 PARP1P09874 1014 aaKnown RBP20.51■□□□□ 0.87
CAPN1-201ENST00000279247 CRKP46108 304 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms