RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 BTBD18B2RXH4 712 aa15.43■□□□□ 0.06
ACER3-201ENST00000278544 FMR1Q06787 632 aaKnown RBP eCLIP15.43■□□□□ 0.06
ACER3-201ENST00000278544 HEATR3Q7Z4Q2 680 aa15.43■□□□□ 0.06
ACER3-201ENST00000278544 RASGRP4Q8TDF6 673 aa15.43■□□□□ 0.06
ACER3-201ENST00000278544 ZKSCAN4Q969J2 545 aaPredicted RBP15.43■□□□□ 0.06
ACER3-201ENST00000278544 LLPHQ9BRT6 129 aaKnown RBP15.43■□□□□ 0.06
ACER3-201ENST00000278544 MRIQ9BWK5 157 aa15.43■□□□□ 0.06
ACER3-201ENST00000278544 FAM205CA6NFA0 338 aa15.43■□□□□ 0.06
ACER3-201ENST00000278544 CDKL5O76039 1030 aa15.43■□□□□ 0.06
ACER3-201ENST00000278544 LMOD1P29536 600 aaPredicted RBP15.43■□□□□ 0.06
ACER3-201ENST00000278544 INPP5BP32019 993 aa15.43■□□□□ 0.06
ACER3-201ENST00000278544 ADM5C9JUS6 153 aa15.42■□□□□ 0.06
ACER3-201ENST00000278544 SLC35G1Q2M3R5 365 aa15.42■□□□□ 0.06
ACER3-201ENST00000278544 DGKHQ86XP1 1220 aa15.42■□□□□ 0.06
ACER3-201ENST00000278544 ZNF408Q9H9D4 720 aa15.42■□□□□ 0.06
ACER3-201ENST00000278544 CABP5Q9NP86 173 aa15.42■□□□□ 0.06
ACER3-201ENST00000278544 CLEC11AQ9Y240 323 aa15.42■□□□□ 0.06
ACER3-201ENST00000278544 CCDC196A0A1B0GTZ2 297 aa15.42■□□□□ 0.06
ACER3-201ENST00000278544 POTEIP0CG38 1075 aa15.42■□□□□ 0.06
ACER3-201ENST00000278544 POTEJP0CG39 1038 aa15.42■□□□□ 0.06
ACER3-201ENST00000278544 PCP11498 1178 aaKnown RBP15.42■□□□□ 0.06
ACER3-201ENST00000278544 TMED8Q6PL24 325 aaPredicted RBP15.42■□□□□ 0.06
ACER3-201ENST00000278544 UIMC1Q96RL1 719 aa15.42■□□□□ 0.06
ACER3-201ENST00000278544 VPS33BQ9H267 617 aa15.42■□□□□ 0.06
ACER3-201ENST00000278544 CYTH3O43739 400 aa15.42■□□□□ 0.06
ACER3-201ENST00000278544 ENTPD3O75355 529 aa15.42■□□□□ 0.06
ACER3-201ENST00000278544 TTLL1O95922 423 aa15.42■□□□□ 0.06
ACER3-201ENST00000278544 PARP1P09874 1014 aaKnown RBP15.42■□□□□ 0.06
ACER3-201ENST00000278544 IFNAR1P17181 557 aa15.42■□□□□ 0.06
ACER3-201ENST00000278544 GPC2Q8N158 579 aa15.42■□□□□ 0.06
ACER3-201ENST00000278544 FBXL16Q8N461 479 aa15.42■□□□□ 0.06
ACER3-201ENST00000278544 FBXO18Q8NFZ0 1043 aa15.42■□□□□ 0.06
ACER3-201ENST00000278544 MAD2L2Q9UI95 211 aa15.42■□□□□ 0.06
ACER3-201ENST00000278544 KIF3AQ9Y496 699 aa15.42■□□□□ 0.06
ACER3-201ENST00000278544 CENPFP49454 3210 aa15.42■□□□□ 0.06
ACER3-201ENST00000278544 DDX60LQ5H9U9 1706 aaKnown RBP15.42■□□□□ 0.06
ACER3-201ENST00000278544 A0A1W2PRG0 241 aa15.41■□□□□ 0.06
ACER3-201ENST00000278544 TOP1P11387 765 aaKnown RBP15.41■□□□□ 0.06
ACER3-201ENST00000278544 TMTC3Q6ZXV5 915 aa15.41■□□□□ 0.06
ACER3-201ENST00000278544 SHISA4Q96DD7 197 aa15.41■□□□□ 0.06
ACER3-201ENST00000278544 MOB2Q70IA6 237 aa15.41■□□□□ 0.06
ACER3-201ENST00000278544 FOXP4Q8IVH2 680 aaPredicted RBP15.41■□□□□ 0.06
ACER3-201ENST00000278544 SWAP70Q9UH65 585 aa15.41■□□□□ 0.06
ACER3-201ENST00000278544 LTBP3Q9NS15 1303 aa15.41■□□□□ 0.06
ACER3-201ENST00000278544 ROBO3Q96MS0 1386 aa15.41■□□□□ 0.06
ACER3-201ENST00000278544 FMNL1O95466 1100 aaPredicted RBP15.4■□□□□ 0.06
ACER3-201ENST00000278544 CAVIN1Q6NZI2 390 aaKnown RBP15.4■□□□□ 0.06
ACER3-201ENST00000278544 DPY19L2Q6NUT2 758 aa15.4■□□□□ 0.06
ACER3-201ENST00000278544 PIGSQ96S52 555 aa15.4■□□□□ 0.06
ACER3-201ENST00000278544 ZBTB22O15209 634 aa15.4■□□□□ 0.06
ACER3-201ENST00000278544 DPF2Q92785 391 aa15.4■□□□□ 0.06
ACER3-201ENST00000278544 FEZ1Q99689 392 aa15.4■□□□□ 0.06
ACER3-201ENST00000278544 LMBRD1Q9NUN5 540 aa15.4■□□□□ 0.06
ACER3-201ENST00000278544 PDHBP11177 359 aa15.39■□□□□ 0.05
ACER3-201ENST00000278544 KIF5BP33176 963 aa15.39■□□□□ 0.05
ACER3-201ENST00000278544 SLC1A4P43007 532 aa15.39■□□□□ 0.05
ACER3-201ENST00000278544 TNNI2P48788 182 aa15.39■□□□□ 0.05
ACER3-201ENST00000278544 ZNF280AP59817 542 aaPredicted RBP15.39■□□□□ 0.05
ACER3-201ENST00000278544 DIS3L2Q8IYB7 885 aaKnown RBP15.39■□□□□ 0.05
ACER3-201ENST00000278544 COA7Q96BR5 231 aa15.39■□□□□ 0.05
ACER3-201ENST00000278544 USP28Q96RU2 1077 aa15.39■□□□□ 0.05
ACER3-201ENST00000278544 RPS12P25398 132 aaKnown RBP15.39■□□□□ 0.05
ACER3-201ENST00000278544 RESTQ13127 1097 aa15.39■□□□□ 0.05
ACER3-201ENST00000278544 SIAH1Q8IUQ4 282 aa15.39■□□□□ 0.05
ACER3-201ENST00000278544 DDAH1O94760 285 aa15.39■□□□□ 0.05
ACER3-201ENST00000278544 MARCKSP29966 332 aaPredicted RBP15.39■□□□□ 0.05
ACER3-201ENST00000278544 TTLL12Q14166 644 aaPredicted RBP15.39■□□□□ 0.05
ACER3-201ENST00000278544 PKN1Q16512 942 aa15.39■□□□□ 0.05
ACER3-201ENST00000278544 TIAM2Q8IVF5 1701 aa15.39■□□□□ 0.05
ACER3-201ENST00000278544 POLR2AP24928 1970 aaKnown RBP15.39■□□□□ 0.05
ACER3-201ENST00000278544 NLRP5P59047 1200 aa15.38■□□□□ 0.05
ACER3-201ENST00000278544 SLFN13Q68D06 897 aa15.38■□□□□ 0.05
ACER3-201ENST00000278544 TYW1BQ6NUM6 668 aa15.38■□□□□ 0.05
ACER3-201ENST00000278544 PGBD1Q96JS3 809 aa15.38■□□□□ 0.05
ACER3-201ENST00000278544 WRNIP1Q96S55 665 aa15.38■□□□□ 0.05
ACER3-201ENST00000278544 MRVI1Q9Y6F6 885 aa15.38■□□□□ 0.05
ACER3-201ENST00000278544 CNTNAP5Q8WYK1 1306 aa15.38■□□□□ 0.05
ACER3-201ENST00000278544 DDX11L8A8MPP1 907 aa15.38■□□□□ 0.05
ACER3-201ENST00000278544 DEXIO95424 95 aa15.38■□□□□ 0.05
ACER3-201ENST00000278544 KIAA1755Q5JYT7 1200 aa15.38■□□□□ 0.05
ACER3-201ENST00000278544 SPATA32Q96LK8 384 aa15.38■□□□□ 0.05
ACER3-201ENST00000278544 F5H6K3 240 aa15.38■□□□□ 0.05
ACER3-201ENST00000278544 KLRC3Q07444 240 aa15.38■□□□□ 0.05
ACER3-201ENST00000278544 FUT2Q10981 343 aa15.38■□□□□ 0.05
ACER3-201ENST00000278544 CLIC4Q9Y696 253 aa15.38■□□□□ 0.05
ACER3-201ENST00000278544 TRIM75PA6NK02 468 aa15.37■□□□□ 0.05
ACER3-201ENST00000278544 USP17L10C9JJH3 530 aa15.37■□□□□ 0.05
ACER3-201ENST00000278544 CALM1P0DP23 149 aa15.37■□□□□ 0.05
ACER3-201ENST00000278544 CALM2P0DP24 149 aa15.37■□□□□ 0.05
ACER3-201ENST00000278544 CALM3P0DP25 149 aa15.37■□□□□ 0.05
ACER3-201ENST00000278544 KRT85P78386 507 aa15.37■□□□□ 0.05
ACER3-201ENST00000278544 EARS2Q5JPH6 523 aaKnown RBP15.37■□□□□ 0.05
ACER3-201ENST00000278544 GPT2Q8TD30 523 aa15.37■□□□□ 0.05
ACER3-201ENST00000278544 ZBED3Q96IU2 234 aaPredicted RBP15.37■□□□□ 0.05
ACER3-201ENST00000278544 TEPSINQ96N21 525 aa15.37■□□□□ 0.05
ACER3-201ENST00000278544 KANSL2Q9H9L4 492 aa15.37■□□□□ 0.05
ACER3-201ENST00000278544 ZBTB21Q9ULJ3 1066 aa15.37■□□□□ 0.05
ACER3-201ENST00000278544 USH1GQ495M9 461 aa15.37■□□□□ 0.05
ACER3-201ENST00000278544 ZNF341Q9BYN7 854 aa15.37■□□□□ 0.05
ACER3-201ENST00000278544 FBXO28Q9NVF7 368 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms