RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 BRD2P25440 801 aaKnown RBP14.41□□□□□ -0.1
HERC6-202ENST00000273960 MLKLQ8NB16 471 aa14.41□□□□□ -0.1
HERC6-202ENST00000273960 NUP133Q8WUM0 1156 aa14.41□□□□□ -0.1
HERC6-202ENST00000273960 ZKSCAN4Q969J2 545 aaPredicted RBP14.41□□□□□ -0.1
HERC6-202ENST00000273960 CCDC114Q96M63 670 aa14.41□□□□□ -0.1
HERC6-202ENST00000273960 FAM205CA6NFA0 338 aa14.41□□□□□ -0.1
HERC6-202ENST00000273960 ELF1P32519 619 aa14.41□□□□□ -0.1
HERC6-202ENST00000273960 ANTXR2P58335 489 aa14.41□□□□□ -0.1
HERC6-202ENST00000273960 SF3B2Q13435 895 aaKnown RBP14.41□□□□□ -0.1
HERC6-202ENST00000273960 BIRC2Q13490 618 aa14.41□□□□□ -0.1
HERC6-202ENST00000273960 RRAGBQ5VZM2 374 aa14.41□□□□□ -0.1
HERC6-202ENST00000273960 POTEDQ86YR6 584 aa14.41□□□□□ -0.1
HERC6-202ENST00000273960 LRRC1Q9BTT6 524 aa14.41□□□□□ -0.1
HERC6-202ENST00000273960 DACH1Q9UI36 760 aa14.41□□□□□ -0.1
HERC6-202ENST00000273960 EPN1Q9Y6I3 576 aaPredicted RBP14.41□□□□□ -0.1
HERC6-202ENST00000273960 A0A1B0GTH6 734 aa14.4□□□□□ -0.1
HERC6-202ENST00000273960 FAM170AA1A519 330 aa14.4□□□□□ -0.1
HERC6-202ENST00000273960 NAP1L1P55209 391 aaKnown RBP14.4□□□□□ -0.1
HERC6-202ENST00000273960 CEP85LQ5SZL2 805 aa14.4□□□□□ -0.1
HERC6-202ENST00000273960 CSRNP2Q9H175 543 aa14.4□□□□□ -0.1
HERC6-202ENST00000273960 CABP5Q9NP86 173 aa14.4□□□□□ -0.1
HERC6-202ENST00000273960 TSR1Q2NL82 804 aaKnown RBP14.4□□□□□ -0.1
HERC6-202ENST00000273960 LRRC24Q50LG9 513 aa14.4□□□□□ -0.1
HERC6-202ENST00000273960 CNGA4Q8IV77 575 aa14.4□□□□□ -0.1
HERC6-202ENST00000273960 TSEN2Q8NCE0 465 aaKnown RBP14.4□□□□□ -0.1
HERC6-202ENST00000273960 FAM89AQ96GI7 184 aa14.4□□□□□ -0.1
HERC6-202ENST00000273960 DNAJC5Q9H3Z4 198 aa14.4□□□□□ -0.1
HERC6-202ENST00000273960 VEZTQ9HBM0 779 aa14.4□□□□□ -0.1
HERC6-202ENST00000273960 GOLGA8AA7E2F4 631 aa14.4□□□□□ -0.1
HERC6-202ENST00000273960 MYO1BO43795 1136 aa14.4□□□□□ -0.1
HERC6-202ENST00000273960 PROCA1Q8NCQ7 364 aaPredicted RBP14.4□□□□□ -0.1
HERC6-202ENST00000273960 METTL22Q9BUU2 404 aaPredicted RBP14.4□□□□□ -0.1
HERC6-202ENST00000273960 ABHD10Q9NUJ1 306 aa14.4□□□□□ -0.1
HERC6-202ENST00000273960 SPATA31A3Q5VYP0 1347 aa14.39□□□□□ -0.11
HERC6-202ENST00000273960 E7EVH7 732 aa14.39□□□□□ -0.11
HERC6-202ENST00000273960 RNF113AO15541 343 aaKnown RBP14.39□□□□□ -0.11
HERC6-202ENST00000273960 PLCD1P51178 756 aa14.39□□□□□ -0.11
HERC6-202ENST00000273960 PTPROQ16827 1216 aa14.39□□□□□ -0.11
HERC6-202ENST00000273960 DIS3L2Q8IYB7 885 aaKnown RBP14.39□□□□□ -0.11
HERC6-202ENST00000273960 NCOA7Q8NI08 942 aa14.39□□□□□ -0.11
HERC6-202ENST00000273960 VPS54Q9P1Q0 977 aa14.39□□□□□ -0.11
HERC6-202ENST00000273960 ASAP1Q9ULH1 1129 aa14.39□□□□□ -0.11
HERC6-202ENST00000273960 CYP26C1Q6V0L0 522 aa14.39□□□□□ -0.11
HERC6-202ENST00000273960 CCNI2Q6ZMN8 369 aaPredicted RBP14.39□□□□□ -0.11
HERC6-202ENST00000273960 PLIN2Q99541 437 aa14.39□□□□□ -0.11
HERC6-202ENST00000273960 ADD3Q9UEY8 706 aaKnown RBP14.39□□□□□ -0.11
HERC6-202ENST00000273960 TBC1D2BQ9UPU7 963 aa14.39□□□□□ -0.11
HERC6-202ENST00000273960 DPYDQ12882 1025 aa14.39□□□□□ -0.11
HERC6-202ENST00000273960 NEDD9Q14511 834 aa14.39□□□□□ -0.11
HERC6-202ENST00000273960 KRT31Q15323 416 aa14.39□□□□□ -0.11
HERC6-202ENST00000273960 DNAJC10Q8IXB1 793 aa14.39□□□□□ -0.11
HERC6-202ENST00000273960 LACRTQ9GZZ8 138 aa14.39□□□□□ -0.11
HERC6-202ENST00000273960 PUS7LQ9H0K6 701 aaKnown RBP14.39□□□□□ -0.11
HERC6-202ENST00000273960 ZSCAN5CA6NGD5 496 aaPredicted RBP14.38□□□□□ -0.11
HERC6-202ENST00000273960 NDUFA10O95299 355 aa14.38□□□□□ -0.11
HERC6-202ENST00000273960 HDLBPQ00341 1268 aaKnown RBP14.38□□□□□ -0.11
HERC6-202ENST00000273960 MORC3Q14149 939 aa14.38□□□□□ -0.11
HERC6-202ENST00000273960 TMTC1Q8IUR5 882 aa14.38□□□□□ -0.11
HERC6-202ENST00000273960 OXER1Q8TDS5 423 aa14.38□□□□□ -0.11
HERC6-202ENST00000273960 MAP3K14Q99558 947 aa14.38□□□□□ -0.11
HERC6-202ENST00000273960 DSCC1Q9BVC3 393 aa14.38□□□□□ -0.11
HERC6-202ENST00000273960 KLC4Q9NSK0 619 aa14.38□□□□□ -0.11
HERC6-202ENST00000273960 XRN1Q8IZH2 1706 aaKnown RBP14.38□□□□□ -0.11
HERC6-202ENST00000273960 GBP2P32456 591 aaPredicted RBP14.38□□□□□ -0.11
HERC6-202ENST00000273960 NNTQ13423 1086 aa14.38□□□□□ -0.11
HERC6-202ENST00000273960 SAFBQ15424 915 aaKnown RBP eCLIP14.38□□□□□ -0.11
HERC6-202ENST00000273960 ZMYM1Q5SVZ6 1142 aa14.38□□□□□ -0.11
HERC6-202ENST00000273960 KRT26Q7Z3Y9 468 aa14.38□□□□□ -0.11
HERC6-202ENST00000273960 IQCA1Q86XH1 822 aa14.38□□□□□ -0.11
HERC6-202ENST00000273960 PUS3Q9BZE2 481 aaKnown RBP14.38□□□□□ -0.11
HERC6-202ENST00000273960 GOLGA6L7A0A1B0GV03 622 aa14.38□□□□□ -0.11
HERC6-202ENST00000273960 HSF2BPO75031 334 aa14.38□□□□□ -0.11
HERC6-202ENST00000273960 TTMPQ5BVD1 217 aa14.38□□□□□ -0.11
HERC6-202ENST00000273960 CCDC70Q6NSX1 233 aa14.38□□□□□ -0.11
HERC6-202ENST00000273960 WDR93Q6P2C0 686 aa14.38□□□□□ -0.11
HERC6-202ENST00000273960 CYB5R4Q7L1T6 521 aa14.38□□□□□ -0.11
HERC6-202ENST00000273960 MAATS1Q7Z4T9 603 aa14.38□□□□□ -0.11
HERC6-202ENST00000273960 RNPC3Q96LT9 517 aaKnown RBP14.38□□□□□ -0.11
HERC6-202ENST00000273960 REXO2Q9Y3B8 237 aaKnown RBP14.38□□□□□ -0.11
HERC6-202ENST00000273960 GRIN2DO15399 1336 aa14.37□□□□□ -0.11
HERC6-202ENST00000273960 OPLAHO14841 1288 aa14.37□□□□□ -0.11
HERC6-202ENST00000273960 MDM2Q00987 491 aaPredicted RBP14.37□□□□□ -0.11
HERC6-202ENST00000273960 AMPD2Q01433 879 aa14.37□□□□□ -0.11
HERC6-202ENST00000273960 PDIA6Q15084 440 aa14.37□□□□□ -0.11
HERC6-202ENST00000273960 CCDC40Q4G0X9 1142 aa14.37□□□□□ -0.11
HERC6-202ENST00000273960 CCDC181Q5TID7 509 aa14.37□□□□□ -0.11
HERC6-202ENST00000273960 SPATA1Q5VX52 437 aa14.37□□□□□ -0.11
HERC6-202ENST00000273960 PALLDQ8WX93 1383 aa14.37□□□□□ -0.11
HERC6-202ENST00000273960 RCCD1A6NED2 376 aa14.37□□□□□ -0.11
HERC6-202ENST00000273960 NCK2O43639 380 aa14.37□□□□□ -0.11
HERC6-202ENST00000273960 PPP6R2O75170 966 aa14.37□□□□□ -0.11
HERC6-202ENST00000273960 ADORA1P30542 326 aa14.37□□□□□ -0.11
HERC6-202ENST00000273960 AARSP49588 968 aaKnown RBP eCLIP14.37□□□□□ -0.11
HERC6-202ENST00000273960 CCDC43Q96MW1 224 aaKnown RBP14.37□□□□□ -0.11
HERC6-202ENST00000273960 ZC3H4Q9UPT8 1303 aaKnown RBP14.37□□□□□ -0.11
HERC6-202ENST00000273960 A0A087X0B3 334 aa14.36□□□□□ -0.11
HERC6-202ENST00000273960 TTC26A0AVF1 554 aa14.36□□□□□ -0.11
HERC6-202ENST00000273960 TRIM49BA6NDI0 452 aa14.36□□□□□ -0.11
HERC6-202ENST00000273960 MEFVO15553 781 aaPredicted RBP14.36□□□□□ -0.11
HERC6-202ENST00000273960 IPO7O95373 1038 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms