RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 C19orf81C9J6K1 198 aa10.93□□□□□ -0.66
TPM3-201ENST00000271850 IGHA2P01877 340 aa10.93□□□□□ -0.66
TPM3-201ENST00000271850 CACNB2Q08289 660 aaPredicted RBP10.93□□□□□ -0.66
TPM3-201ENST00000271850 PABPC4Q13310 644 aaKnown RBP eCLIP10.93□□□□□ -0.662e-26■■■□□ 15.7
TPM3-201ENST00000271850 ZYXQ15942 572 aaKnown RBP10.93□□□□□ -0.66
TPM3-201ENST00000271850 GPR142Q7Z601 462 aa10.93□□□□□ -0.66
TPM3-201ENST00000271850 FTSJ3Q8IY81 847 aaKnown RBP10.93□□□□□ -0.66
TPM3-201ENST00000271850 CRACR2BQ8N4Y2 399 aaPredicted RBP10.93□□□□□ -0.66
TPM3-201ENST00000271850 GPRC5AQ8NFJ5 357 aa10.93□□□□□ -0.66
TPM3-201ENST00000271850 EDC3Q96F86 508 aaKnown RBP10.93□□□□□ -0.66
TPM3-201ENST00000271850 LRCH3Q96II8 777 aa10.93□□□□□ -0.66
TPM3-201ENST00000271850 NOL10Q9BSC4 688 aaKnown RBP10.93□□□□□ -0.66
TPM3-201ENST00000271850 EHD4Q9H223 541 aa10.93□□□□□ -0.66
TPM3-201ENST00000271850 IL1RAPL2Q9NP60 686 aa10.93□□□□□ -0.66
TPM3-201ENST00000271850 FRMPD3Q5JV73 1810 aa10.93□□□□□ -0.66
TPM3-201ENST00000271850 A0A1W2PRG0 241 aa10.92□□□□□ -0.66
TPM3-201ENST00000271850 TCRBV5S4A2TA0A5A2 114 aa10.92□□□□□ -0.66
TPM3-201ENST00000271850 EVI5O60447 810 aa10.92□□□□□ -0.66
TPM3-201ENST00000271850 IGSF3O75054 1194 aa10.92□□□□□ -0.66
TPM3-201ENST00000271850 COL6A1P12109 1028 aa10.92□□□□□ -0.66
TPM3-201ENST00000271850 XRCC5P13010 732 aaKnown RBP10.92□□□□□ -0.66
TPM3-201ENST00000271850 VCAM1P19320 739 aa10.92□□□□□ -0.66
TPM3-201ENST00000271850 CCND3P30281 292 aaPredicted RBP10.92□□□□□ -0.66
TPM3-201ENST00000271850 KIAA1755Q5JYT7 1200 aa10.92□□□□□ -0.66
TPM3-201ENST00000271850 AACSQ86V21 672 aa10.92□□□□□ -0.66
TPM3-201ENST00000271850 GDF15Q99988 308 aa10.92□□□□□ -0.66
TPM3-201ENST00000271850 PAGR1Q9BTK6 254 aa10.92□□□□□ -0.66
TPM3-201ENST00000271850 GINM1Q9NU53 330 aa10.92□□□□□ -0.66
TPM3-201ENST00000271850 TMOD4Q9NZQ9 345 aa10.92□□□□□ -0.66
TPM3-201ENST00000271850 BTBD7Q9P203 1132 aa10.92□□□□□ -0.66
TPM3-201ENST00000271850 SERPINB13Q9UIV8 391 aa10.92□□□□□ -0.66
TPM3-201ENST00000271850 A0A0G2JMZ2 1700 aa10.92□□□□□ -0.66
TPM3-201ENST00000271850 CDH23Q9H251 3354 aa10.91□□□□□ -0.66
TPM3-201ENST00000271850 STK25O00506 426 aa10.91□□□□□ -0.66
TPM3-201ENST00000271850 HLA-DOAP06340 250 aa10.91□□□□□ -0.66
TPM3-201ENST00000271850 CYP2D6P10635 497 aa10.91□□□□□ -0.66
TPM3-201ENST00000271850 PDE6AP16499 860 aa10.91□□□□□ -0.66
TPM3-201ENST00000271850 USP5P45974 858 aa10.91□□□□□ -0.66
TPM3-201ENST00000271850 USP17L2Q6R6M4 530 aa10.91□□□□□ -0.66
TPM3-201ENST00000271850 CATSPERGQ6ZRH7 1159 aa10.91□□□□□ -0.66
TPM3-201ENST00000271850 NECAB2Q7Z6G3 386 aa10.91□□□□□ -0.66
TPM3-201ENST00000271850 C7orf61Q8IZ16 206 aa10.91□□□□□ -0.66
TPM3-201ENST00000271850 ANKLE1Q8NAG6 615 aa10.91□□□□□ -0.66
TPM3-201ENST00000271850 SLC44A5Q8NCS7 719 aa10.91□□□□□ -0.66
TPM3-201ENST00000271850 RHPN1Q8TCX5 695 aa10.91□□□□□ -0.66
TPM3-201ENST00000271850 NUDT12Q9BQG2 462 aa10.91□□□□□ -0.66
TPM3-201ENST00000271850 HMX1Q9NP08 348 aaPredicted RBP10.91□□□□□ -0.66
TPM3-201ENST00000271850 ZMYND8Q9ULU4 1186 aaPredicted RBP10.91□□□□□ -0.66
TPM3-201ENST00000271850 NR2E3Q9Y5X4 410 aa10.91□□□□□ -0.66
TPM3-201ENST00000271850 A0A0C4DFX4 3053 aa10.91□□□□□ -0.66
TPM3-201ENST00000271850 ZBED9Q6R2W3 1325 aa10.9□□□□□ -0.66
TPM3-201ENST00000271850 SPDYE16A6NNV3 312 aaPredicted RBP10.9□□□□□ -0.66
TPM3-201ENST00000271850 SYN1P17600 705 aa10.9□□□□□ -0.66
TPM3-201ENST00000271850 MAPK4P31152 587 aa10.9□□□□□ -0.66
TPM3-201ENST00000271850 RAB3GAP1Q15042 981 aa10.9□□□□□ -0.66
TPM3-201ENST00000271850 LBX2Q6XYB7 198 aa10.9□□□□□ -0.66
TPM3-201ENST00000271850 PLEKHH3Q7Z736 793 aa10.9□□□□□ -0.66
TPM3-201ENST00000271850 CLEC10AQ8IUN9 316 aa10.9□□□□□ -0.66
TPM3-201ENST00000271850 SIAH1Q8IUQ4 282 aa10.9□□□□□ -0.66
TPM3-201ENST00000271850 LCORLQ8N3X6 602 aa10.9□□□□□ -0.66
TPM3-201ENST00000271850 TRPV1Q8NER1 839 aa10.9□□□□□ -0.66
TPM3-201ENST00000271850 NPLOC4Q8TAT6 608 aa10.9□□□□□ -0.66
TPM3-201ENST00000271850 SDR42E1Q8WUS8 393 aa10.9□□□□□ -0.66
TPM3-201ENST00000271850 SOCS4Q8WXH5 440 aa10.9□□□□□ -0.66
TPM3-201ENST00000271850 KIAA1683Q9H0B3 1180 aa10.9□□□□□ -0.66
TPM3-201ENST00000271850 C11orf49Q9H6J7 331 aa10.9□□□□□ -0.66
TPM3-201ENST00000271850 ZNF532Q9HCE3 1301 aa10.89□□□□□ -0.67
TPM3-201ENST00000271850 PRKAB2O43741 272 aa10.89□□□□□ -0.67
TPM3-201ENST00000271850 ZKSCAN1P17029 563 aaPredicted RBP10.89□□□□□ -0.67
TPM3-201ENST00000271850 CAPN2P17655 700 aa10.89□□□□□ -0.67
TPM3-201ENST00000271850 SEPT2Q15019 361 aa10.89□□□□□ -0.67
TPM3-201ENST00000271850 ABCB5Q2M3G0 1257 aa10.89□□□□□ -0.67
TPM3-201ENST00000271850 CERKLQ49MI3 558 aaPredicted RBP10.89□□□□□ -0.67
TPM3-201ENST00000271850 APBA2Q99767 749 aa10.89□□□□□ -0.67
TPM3-201ENST00000271850 TRIM34Q9BYJ4 488 aa10.89□□□□□ -0.67
TPM3-201ENST00000271850 NBPF3Q9H094 633 aa10.89□□□□□ -0.67
TPM3-201ENST00000271850 DCP1AQ9NPI6 582 aaPredicted RBP10.89□□□□□ -0.67
TPM3-201ENST00000271850 ZBTB40Q9NUA8 1239 aa10.89□□□□□ -0.67
TPM3-201ENST00000271850 RABGAP1Q9Y3P9 1069 aa10.89□□□□□ -0.67
TPM3-201ENST00000271850 UNC80Q8N2C7 3258 aa10.89□□□□□ -0.67
TPM3-201ENST00000271850 PARP14Q460N5 1801 aa10.88□□□□□ -0.67
TPM3-201ENST00000271850 EYSQ5T1H1 3165 aa10.88□□□□□ -0.67
TPM3-201ENST00000271850 MAGEB6P1A0A0J9YX57 407 aa10.88□□□□□ -0.67
TPM3-201ENST00000271850 A0A1W2PPC1 479 aa10.88□□□□□ -0.67
TPM3-201ENST00000271850 USP17L15C9J2P7 530 aa10.88□□□□□ -0.67
TPM3-201ENST00000271850 USP17L13C9JLJ4 530 aa10.88□□□□□ -0.67
TPM3-201ENST00000271850 USP17L11C9JVI0 530 aa10.88□□□□□ -0.67
TPM3-201ENST00000271850 USP17L18D6R9N7 530 aa10.88□□□□□ -0.67
TPM3-201ENST00000271850 USP17L22D6RA61 530 aa10.88□□□□□ -0.67
TPM3-201ENST00000271850 USP17L17D6RBQ6 530 aa10.88□□□□□ -0.67
TPM3-201ENST00000271850 USP17L19D6RCP7 530 aa10.88□□□□□ -0.67
TPM3-201ENST00000271850 USP17L20D6RJB6 530 aa10.88□□□□□ -0.67
TPM3-201ENST00000271850 TK2O00142 265 aa10.88□□□□□ -0.67
TPM3-201ENST00000271850 BMP8BP34820 402 aa10.88□□□□□ -0.67
TPM3-201ENST00000271850 RGS2P41220 211 aa10.88□□□□□ -0.67
TPM3-201ENST00000271850 MAGEA10P43363 369 aaPredicted RBP10.88□□□□□ -0.67
TPM3-201ENST00000271850 USP17L24Q0WX57 530 aa10.88□□□□□ -0.67
TPM3-201ENST00000271850 MAP3K12Q12852 859 aa10.88□□□□□ -0.67
TPM3-201ENST00000271850 MAP2K5Q13163 448 aa10.88□□□□□ -0.67
TPM3-201ENST00000271850 GRB14Q14449 540 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms