RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 NYXQ9GZU5 481 aa12.89□□□□□ -0.35
VPS33A-201ENST00000267199 FAM207AQ9NSI2 230 aaPredicted RBP12.89□□□□□ -0.35
VPS33A-201ENST00000267199 CCDC87Q9NVE4 849 aa12.89□□□□□ -0.35
VPS33A-201ENST00000267199 SAMD15Q9P1V8 674 aa12.89□□□□□ -0.35
VPS33A-201ENST00000267199 BAIAP2L1Q9UHR4 511 aa12.89□□□□□ -0.35
VPS33A-201ENST00000267199 SAP30BPQ9UHR5 308 aaKnown RBP12.89□□□□□ -0.35
VPS33A-201ENST00000267199 PHLPP2Q6ZVD8 1323 aa12.89□□□□□ -0.35
VPS33A-201ENST00000267199 CCDC151A5D8V7 595 aa12.89□□□□□ -0.35
VPS33A-201ENST00000267199 IRX5P78411 483 aaPredicted RBP12.89□□□□□ -0.35
VPS33A-201ENST00000267199 MYCBPQ99417 103 aaPredicted RBP12.89□□□□□ -0.35
VPS33A-201ENST00000267199 JRKLQ9Y4A0 524 aa12.89□□□□□ -0.35
VPS33A-201ENST00000267199 MORC2Q9Y6X9 1032 aaPredicted RBP12.89□□□□□ -0.35
VPS33A-201ENST00000267199 NCOA3Q9Y6Q9 1424 aa12.89□□□□□ -0.35
VPS33A-201ENST00000267199 PTPROQ16827 1216 aa12.89□□□□□ -0.35
VPS33A-201ENST00000267199 ANKRD2Q9GZV1 360 aa12.89□□□□□ -0.35
VPS33A-201ENST00000267199 KCNK9Q9NPC2 374 aa12.89□□□□□ -0.35
VPS33A-201ENST00000267199 CAMSAP1Q5T5Y3 1602 aa12.89□□□□□ -0.35
VPS33A-201ENST00000267199 SOWAHDA6NJG2 315 aa12.89□□□□□ -0.35
VPS33A-201ENST00000267199 CYP27B1O15528 508 aa12.89□□□□□ -0.35
VPS33A-201ENST00000267199 RNF40O75150 1001 aa12.89□□□□□ -0.35
VPS33A-201ENST00000267199 CETN2P41208 172 aa12.89□□□□□ -0.35
VPS33A-201ENST00000267199 TYW1BQ6NUM6 668 aa12.89□□□□□ -0.35
VPS33A-201ENST00000267199 ZNF804AQ7Z570 1209 aa12.89□□□□□ -0.35
VPS33A-201ENST00000267199 PLA2G4DQ86XP0 818 aa12.89□□□□□ -0.35
VPS33A-201ENST00000267199 SMYD4Q8IYR2 804 aaPredicted RBP12.89□□□□□ -0.35
VPS33A-201ENST00000267199 ANKRD13CQ8N6S4 541 aa12.89□□□□□ -0.35
VPS33A-201ENST00000267199 OR8K1Q8NGG5 319 aa12.89□□□□□ -0.35
VPS33A-201ENST00000267199 CAPS2Q9BXY5 557 aa12.89□□□□□ -0.35
VPS33A-201ENST00000267199 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.89□□□□□ -0.35
VPS33A-201ENST00000267199 USP31Q70CQ4 1352 aa12.88□□□□□ -0.35
VPS33A-201ENST00000267199 GYG1P46976 350 aa12.88□□□□□ -0.35
VPS33A-201ENST00000267199 PLCD1P51178 756 aa12.88□□□□□ -0.35
VPS33A-201ENST00000267199 IFT20Q8IY31 132 aa12.88□□□□□ -0.35
VPS33A-201ENST00000267199 EXOC4Q96A65 974 aa12.88□□□□□ -0.35
VPS33A-201ENST00000267199 MAP3K15Q6ZN16 1313 aa12.88□□□□□ -0.35
VPS33A-201ENST00000267199 TRAF5O00463 557 aa12.88□□□□□ -0.35
VPS33A-201ENST00000267199 ARHGAP25P42331 645 aa12.88□□□□□ -0.35
VPS33A-201ENST00000267199 MED4Q9NPJ6 270 aa12.88□□□□□ -0.35
VPS33A-201ENST00000267199 H7C1W4 665 aa12.88□□□□□ -0.35
VPS33A-201ENST00000267199 ATP8B1O43520 1251 aa12.88□□□□□ -0.35
VPS33A-201ENST00000267199 TBCAO75347 108 aaKnown RBP12.88□□□□□ -0.35
VPS33A-201ENST00000267199 ACRBPQ8NEB7 543 aa12.88□□□□□ -0.35
VPS33A-201ENST00000267199 TSGA10Q9BZW7 698 aa12.88□□□□□ -0.35
VPS33A-201ENST00000267199 SERPINA10Q9UK55 444 aa12.88□□□□□ -0.35
VPS33A-201ENST00000267199 SLAIN2Q9P270 581 aa12.88□□□□□ -0.35
VPS33A-201ENST00000267199 PARP1P09874 1014 aaKnown RBP12.87□□□□□ -0.35
VPS33A-201ENST00000267199 IFIH1Q9BYX4 1025 aaKnown RBP12.87□□□□□ -0.35
VPS33A-201ENST00000267199 ABCB6Q9NP58 842 aa12.87□□□□□ -0.35
VPS33A-201ENST00000267199 NLRC4Q9NPP4 1024 aa12.87□□□□□ -0.35
VPS33A-201ENST00000267199 SAMSN1Q9NSI8 373 aaKnown RBP12.87□□□□□ -0.35
VPS33A-201ENST00000267199 KIDINS220Q9ULH0 1771 aa12.87□□□□□ -0.35
VPS33A-201ENST00000267199 GRIPAP1Q4V328 841 aa12.87□□□□□ -0.35
VPS33A-201ENST00000267199 C2CD5Q86YS7 1000 aa12.87□□□□□ -0.35
VPS33A-201ENST00000267199 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.87□□□□□ -0.35
VPS33A-201ENST00000267199 ZBTB1Q9Y2K1 713 aa12.87□□□□□ -0.35
VPS33A-201ENST00000267199 RPAP1Q9BWH6 1393 aaPredicted RBP12.87□□□□□ -0.35
VPS33A-201ENST00000267199 MED23Q9ULK4 1368 aa12.87□□□□□ -0.35
VPS33A-201ENST00000267199 CEP104O60308 925 aa12.87□□□□□ -0.35
VPS33A-201ENST00000267199 ADD2P35612 726 aa12.87□□□□□ -0.35
VPS33A-201ENST00000267199 TFAP4Q01664 338 aa12.87□□□□□ -0.35
VPS33A-201ENST00000267199 TEX11Q8IYF3 940 aa12.87□□□□□ -0.35
VPS33A-201ENST00000267199 RTCBQ9Y3I0 505 aaKnown RBP12.87□□□□□ -0.35
VPS33A-201ENST00000267199 ZC3H13Q5T200 1668 aaKnown RBP12.87□□□□□ -0.35
VPS33A-201ENST00000267199 BUB1BO60566 1050 aaPredicted RBP12.86□□□□□ -0.35
VPS33A-201ENST00000267199 TXKP42681 527 aa12.86□□□□□ -0.35
VPS33A-201ENST00000267199 SV2BQ7L1I2 683 aa12.86□□□□□ -0.35
VPS33A-201ENST00000267199 ERMNQ8TAM6 284 aa12.86□□□□□ -0.35
VPS33A-201ENST00000267199 EPN1Q9Y6I3 576 aaPredicted RBP12.86□□□□□ -0.35
VPS33A-201ENST00000267199 HEG1Q9ULI3 1381 aa12.86□□□□□ -0.35
VPS33A-201ENST00000267199 KCNJ18B7U540 433 aa12.86□□□□□ -0.35
VPS33A-201ENST00000267199 RBL2Q08999 1139 aa12.86□□□□□ -0.35
VPS33A-201ENST00000267199 KCNJ12Q14500 433 aa12.86□□□□□ -0.35
VPS33A-201ENST00000267199 TNIP1Q15025 636 aa12.86□□□□□ -0.35
VPS33A-201ENST00000267199 SYCP3Q8IZU3 236 aa12.86□□□□□ -0.35
VPS33A-201ENST00000267199 ZNF526Q8TF50 670 aaPredicted RBP12.86□□□□□ -0.35
VPS33A-201ENST00000267199 NOX5Q96PH1 765 aa12.86□□□□□ -0.35
VPS33A-201ENST00000267199 ANKARQ7Z5J8 1434 aa12.86□□□□□ -0.35
VPS33A-201ENST00000267199 TMEM94Q12767 1356 aa12.86□□□□□ -0.35
VPS33A-201ENST00000267199 GNPATO15228 680 aa12.86□□□□□ -0.35
VPS33A-201ENST00000267199 CASP8Q14790 479 aa12.86□□□□□ -0.35
VPS33A-201ENST00000267199 CEP85LQ5SZL2 805 aa12.86□□□□□ -0.35
VPS33A-201ENST00000267199 HOOK3Q86VS8 718 aa12.86□□□□□ -0.35
VPS33A-201ENST00000267199 FRMD3A2A2Y4 597 aa12.86□□□□□ -0.35
VPS33A-201ENST00000267199 TMEM232C9JQI7 657 aa12.86□□□□□ -0.35
VPS33A-201ENST00000267199 PPP6R2O75170 966 aa12.86□□□□□ -0.35
VPS33A-201ENST00000267199 CHGBP05060 677 aa12.86□□□□□ -0.35
VPS33A-201ENST00000267199 PAK2Q13177 524 aa12.86□□□□□ -0.35
VPS33A-201ENST00000267199 NR5A1Q13285 461 aa12.86□□□□□ -0.35
VPS33A-201ENST00000267199 CC2D1AQ6P1N0 951 aaPredicted RBP12.86□□□□□ -0.35
VPS33A-201ENST00000267199 SARM1Q6SZW1 724 aa12.86□□□□□ -0.35
VPS33A-201ENST00000267199 ANKRD7Q92527 254 aa12.86□□□□□ -0.35
VPS33A-201ENST00000267199 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.86□□□□□ -0.35
VPS33A-201ENST00000267199 GOLPH3LQ9H4A5 285 aa12.86□□□□□ -0.35
VPS33A-201ENST00000267199 ATG3Q9NT62 314 aa12.86□□□□□ -0.35
VPS33A-201ENST00000267199 NRKQ7Z2Y5 1582 aa12.86□□□□□ -0.35
VPS33A-201ENST00000267199 IKBKBO14920 756 aa12.85□□□□□ -0.35
VPS33A-201ENST00000267199 PLCG2P16885 1265 aa12.85□□□□□ -0.35
VPS33A-201ENST00000267199 ARID4AP29374 1257 aaPredicted RBP12.85□□□□□ -0.35
VPS33A-201ENST00000267199 CETN1Q12798 172 aa12.85□□□□□ -0.35
VPS33A-201ENST00000267199 KRT71Q3SY84 523 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms