RNA–Protein interactions for RNA: ENST00000266943.10

SLC46A3-201, Transcript of solute carrier family 46 member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLC46A3, Length 3,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A3-201ENST00000266943 YEATS4O95619 227 aa16.44■□□□□ 0.22
SLC46A3-201ENST00000266943 VIL1P09327 827 aaKnown RBP16.44■□□□□ 0.22
SLC46A3-201ENST00000266943 KIF5BP33176 963 aa16.44■□□□□ 0.22
SLC46A3-201ENST00000266943 DALRD3Q5D0E6 543 aaKnown RBP16.44■□□□□ 0.22
SLC46A3-201ENST00000266943 EARS2Q5JPH6 523 aaKnown RBP16.44■□□□□ 0.22
SLC46A3-201ENST00000266943 CCAR1Q8IX12 1150 aaKnown RBP16.44■□□□□ 0.22
SLC46A3-201ENST00000266943 PTPAQ15257 358 aa16.43■□□□□ 0.22
SLC46A3-201ENST00000266943 SPTLC2O15270 562 aa16.43■□□□□ 0.22
SLC46A3-201ENST00000266943 NOM1Q5C9Z4 860 aaKnown RBP16.43■□□□□ 0.22
SLC46A3-201ENST00000266943 FOXP1Q9H334 677 aaPredicted RBP16.43■□□□□ 0.22
SLC46A3-201ENST00000266943 MTMR4Q9NYA4 1195 aa16.43■□□□□ 0.22
SLC46A3-201ENST00000266943 PALM3A6NDB9 673 aaPredicted RBP16.42■□□□□ 0.22
SLC46A3-201ENST00000266943 HLA-DOAP06340 250 aa16.42■□□□□ 0.22
SLC46A3-201ENST00000266943 SNW1Q13573 536 aaKnown RBP16.42■□□□□ 0.22
SLC46A3-201ENST00000266943 PFKFB3Q16875 520 aaPredicted RBP16.42■□□□□ 0.22
SLC46A3-201ENST00000266943 LRRC47Q8N1G4 583 aaKnown RBP16.42■□□□□ 0.22
SLC46A3-201ENST00000266943 UPF1Q92900 1129 aaKnown RBP eCLIP16.42■□□□□ 0.22
SLC46A3-201ENST00000266943 FUCA2Q9BTY2 467 aa16.42■□□□□ 0.22
SLC46A3-201ENST00000266943 TSPY26PQ9H489 355 aa16.42■□□□□ 0.22
SLC46A3-201ENST00000266943 SWAP70Q9UH65 585 aa16.42■□□□□ 0.22
SLC46A3-201ENST00000266943 NFKBIEO00221 500 aa16.42■□□□□ 0.22
SLC46A3-201ENST00000266943 SCG2P13521 617 aa16.42■□□□□ 0.22
SLC46A3-201ENST00000266943 MARCKSP29966 332 aaPredicted RBP16.42■□□□□ 0.22
SLC46A3-201ENST00000266943 PTGER2P43116 358 aa16.42■□□□□ 0.22
SLC46A3-201ENST00000266943 SAFBQ15424 915 aaKnown RBP eCLIP16.42■□□□□ 0.22
SLC46A3-201ENST00000266943 USP17L2Q6R6M4 530 aa16.42■□□□□ 0.22
SLC46A3-201ENST00000266943 RNF214Q8ND24 703 aa16.42■□□□□ 0.22
SLC46A3-201ENST00000266943 GPKOWQ92917 476 aaPredicted RBP eCLIP16.42■□□□□ 0.22
SLC46A3-201ENST00000266943 NUP62CLQ9H1M0 184 aa16.42■□□□□ 0.22
SLC46A3-201ENST00000266943 EHD4Q9H223 541 aa16.42■□□□□ 0.22
SLC46A3-201ENST00000266943 TOP1P11387 765 aaKnown RBP16.42■□□□□ 0.22
SLC46A3-201ENST00000266943 KCNG4Q8TDN1 519 aa16.42■□□□□ 0.22
SLC46A3-201ENST00000266943 SLC39A14Q15043 492 aa16.41■□□□□ 0.22
SLC46A3-201ENST00000266943 NIM1KQ8IY84 436 aa16.41■□□□□ 0.22
SLC46A3-201ENST00000266943 CLSTN2Q9H4D0 955 aa16.41■□□□□ 0.22
SLC46A3-201ENST00000266943 ZNRF3Q9ULT6 936 aa16.41■□□□□ 0.22
SLC46A3-201ENST00000266943 SPDYE2BA6NHP3 402 aa16.41■□□□□ 0.22
SLC46A3-201ENST00000266943 USP17L5A8MUK1 530 aa16.41■□□□□ 0.22
SLC46A3-201ENST00000266943 SPDYE6P0CI01 402 aa16.41■□□□□ 0.22
SLC46A3-201ENST00000266943 AXDND1Q5T1B0 1012 aaPredicted RBP16.41■□□□□ 0.22
SLC46A3-201ENST00000266943 SOGA3Q5TF21 947 aa16.41■□□□□ 0.22
SLC46A3-201ENST00000266943 ZSCAN29Q8IWY8 852 aaPredicted RBP16.41■□□□□ 0.22
SLC46A3-201ENST00000266943 FSIP1Q8NA03 581 aa16.41■□□□□ 0.22
SLC46A3-201ENST00000266943 ENGASEQ8NFI3 743 aa16.41■□□□□ 0.22
SLC46A3-201ENST00000266943 MYO3BQ8WXR4 1341 aa16.41■□□□□ 0.22
SLC46A3-201ENST00000266943 CLRN2A0PK11 232 aa16.4■□□□□ 0.22
SLC46A3-201ENST00000266943 ADALQ6DHV7 355 aa16.4■□□□□ 0.22
SLC46A3-201ENST00000266943 TYW1BQ6NUM6 668 aa16.4■□□□□ 0.22
SLC46A3-201ENST00000266943 CKAP2LQ8IYA6 745 aa16.4■□□□□ 0.22
SLC46A3-201ENST00000266943 SHTN1A0MZ66 631 aa16.4■□□□□ 0.22
SLC46A3-201ENST00000266943 WNT7AO00755 349 aa16.4■□□□□ 0.22
SLC46A3-201ENST00000266943 TNFRSF25Q93038 417 aa16.4■□□□□ 0.22
SLC46A3-201ENST00000266943 TAOK3Q9H2K8 898 aa16.4■□□□□ 0.22
SLC46A3-201ENST00000266943 CABP5Q9NP86 173 aa16.4■□□□□ 0.22
SLC46A3-201ENST00000266943 DDX19AQ9NUU7 478 aaKnown RBP16.4■□□□□ 0.22
SLC46A3-201ENST00000266943 A0A1B0GVL5 298 aa16.4■□□□□ 0.22
SLC46A3-201ENST00000266943 KLRF2D3W0D1 207 aa16.4■□□□□ 0.22
SLC46A3-201ENST00000266943 MPHOSPH10O00566 681 aaKnown RBP16.4■□□□□ 0.22
SLC46A3-201ENST00000266943 KRT2P35908 639 aa16.4■□□□□ 0.22
SLC46A3-201ENST00000266943 CXCL9Q07325 125 aa16.4■□□□□ 0.22
SLC46A3-201ENST00000266943 DHX36Q9H2U1 1008 aaKnown RBP16.4■□□□□ 0.22
SLC46A3-201ENST00000266943 PCDHB6Q9Y5E3 794 aa16.4■□□□□ 0.22
SLC46A3-201ENST00000266943 LETM1O95202 739 aaPredicted RBP16.39■□□□□ 0.21
SLC46A3-201ENST00000266943 PDHBP11177 359 aa16.39■□□□□ 0.21
SLC46A3-201ENST00000266943 XBP1P17861 261 aa16.39■□□□□ 0.21
SLC46A3-201ENST00000266943 VPS33BQ9H267 617 aa16.39■□□□□ 0.21
SLC46A3-201ENST00000266943 TNMDQ9H2S6 317 aa16.39■□□□□ 0.21
SLC46A3-201ENST00000266943 PI4KBQ9UBF8 816 aa16.39■□□□□ 0.21
SLC46A3-201ENST00000266943 CLIP2Q9UDT6 1046 aa16.39■□□□□ 0.21
SLC46A3-201ENST00000266943 FRMPD2Q68DX3 1309 aaPredicted RBP16.39■□□□□ 0.21
SLC46A3-201ENST00000266943 ATRNL1Q5VV63 1379 aa16.39■□□□□ 0.21
SLC46A3-201ENST00000266943 NPM3O75607 178 aaKnown RBP16.39■□□□□ 0.21
SLC46A3-201ENST00000266943 PRELPP51888 382 aa16.39■□□□□ 0.21
SLC46A3-201ENST00000266943 NDUFA8P51970 172 aa16.39■□□□□ 0.21
SLC46A3-201ENST00000266943 NLGN2Q8NFZ4 835 aa16.39■□□□□ 0.21
SLC46A3-201ENST00000266943 BCS1LQ9Y276 419 aa16.39■□□□□ 0.21
SLC46A3-201ENST00000266943 TCP10L2B9ZVM9 353 aa16.38■□□□□ 0.21
SLC46A3-201ENST00000266943 PARP1P09874 1014 aaKnown RBP16.38■□□□□ 0.21
SLC46A3-201ENST00000266943 WWC2Q6AWC2 1192 aa16.38■□□□□ 0.21
SLC46A3-201ENST00000266943 MRPS27Q92552 414 aaKnown RBP16.38■□□□□ 0.21
SLC46A3-201ENST00000266943 A0A1W2PQ27 194 aa16.38■□□□□ 0.21
SLC46A3-201ENST00000266943 A0A1W2PQ64 194 aa16.38■□□□□ 0.21
SLC46A3-201ENST00000266943 A0A1W2PQD8 194 aa16.38■□□□□ 0.21
SLC46A3-201ENST00000266943 FAM160A1Q05DH4 1040 aa16.38■□□□□ 0.21
SLC46A3-201ENST00000266943 MAP3K11Q16584 847 aa16.38■□□□□ 0.21
SLC46A3-201ENST00000266943 RBM43Q6ZSC3 357 aaKnown RBP16.38■□□□□ 0.21
SLC46A3-201ENST00000266943 FMR1NBQ8N0W7 255 aaPredicted RBP16.38■□□□□ 0.21
SLC46A3-201ENST00000266943 CLIC6Q96NY7 704 aa16.38■□□□□ 0.21
SLC46A3-201ENST00000266943 MRVI1Q9Y6F6 885 aa16.38■□□□□ 0.21
SLC46A3-201ENST00000266943 TTLL1O95922 423 aa16.38■□□□□ 0.21
SLC46A3-201ENST00000266943 ATP2B1P20020 1258 aa16.38■□□□□ 0.21
SLC46A3-201ENST00000266943 RASSF7Q02833 373 aa16.38■□□□□ 0.21
SLC46A3-201ENST00000266943 CNTNAP1P78357 1384 aa16.37■□□□□ 0.21
SLC46A3-201ENST00000266943 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.37■□□□□ 0.21
SLC46A3-201ENST00000266943 GNAQP50148 359 aa16.37■□□□□ 0.21
SLC46A3-201ENST00000266943 JAG1P78504 1218 aa16.37■□□□□ 0.21
SLC46A3-201ENST00000266943 RRP1BQ14684 758 aaKnown RBP16.37■□□□□ 0.21
SLC46A3-201ENST00000266943 CCDC73Q6ZRK6 1079 aa16.37■□□□□ 0.21
SLC46A3-201ENST00000266943 ZNF70Q9UC06 446 aaPredicted RBP16.37■□□□□ 0.21
SLC46A3-201ENST00000266943 CD2APQ9Y5K6 639 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms