RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 NBPF10Q6P3W6 841 aaKnown RBP17.22■□□□□ 0.35
TIMP3-201ENST00000266085 NBPF15Q8N660 670 aa17.22■□□□□ 0.35
TIMP3-201ENST00000266085 ABCB5Q2M3G0 1257 aa17.22■□□□□ 0.35
TIMP3-201ENST00000266085 DPH6Q7L8W6 267 aa17.22■□□□□ 0.35
TIMP3-201ENST00000266085 FNBP1Q96RU3 617 aa17.22■□□□□ 0.35
TIMP3-201ENST00000266085 KIAA1468Q9P260 1216 aa17.22■□□□□ 0.35
TIMP3-201ENST00000266085 GINS2Q9Y248 185 aa17.22■□□□□ 0.35
TIMP3-201ENST00000266085 ALAS1P13196 640 aa17.21■□□□□ 0.35
TIMP3-201ENST00000266085 PFKFB1P16118 471 aa17.21■□□□□ 0.35
TIMP3-201ENST00000266085 BIRC3Q13489 604 aa17.21■□□□□ 0.35
TIMP3-201ENST00000266085 CSRNP1Q96S65 589 aa17.21■□□□□ 0.35
TIMP3-201ENST00000266085 BLZF1Q9H2G9 400 aa17.21■□□□□ 0.35
TIMP3-201ENST00000266085 TBC1D7Q9P0N9 293 aa17.21■□□□□ 0.35
TIMP3-201ENST00000266085 SERPINB13Q9UIV8 391 aa17.21■□□□□ 0.35
TIMP3-201ENST00000266085 HSF2BPO75031 334 aa17.21■□□□□ 0.35
TIMP3-201ENST00000266085 MCAMP43121 646 aa17.21■□□□□ 0.35
TIMP3-201ENST00000266085 GPR101Q96P66 508 aaPredicted RBP17.21■□□□□ 0.35
TIMP3-201ENST00000266085 RAD17O75943 681 aa17.21■□□□□ 0.35
TIMP3-201ENST00000266085 ERCC3P19447 782 aa17.21■□□□□ 0.35
TIMP3-201ENST00000266085 QRICH2Q9H0J4 1663 aa17.21■□□□□ 0.35
TIMP3-201ENST00000266085 EEF2P13639 858 aaKnown RBP17.2■□□□□ 0.34
TIMP3-201ENST00000266085 VWA3BQ502W6 1294 aa17.2■□□□□ 0.34
TIMP3-201ENST00000266085 SMCR8Q8TEV9 937 aaPredicted RBP17.2■□□□□ 0.34
TIMP3-201ENST00000266085 CAPZA3Q96KX2 299 aa17.2■□□□□ 0.34
TIMP3-201ENST00000266085 RASAL2Q9UJF2 1139 aa17.2■□□□□ 0.34
TIMP3-201ENST00000266085 CAMSAP1Q5T5Y3 1602 aa17.2■□□□□ 0.34
TIMP3-201ENST00000266085 TMEM232C9JQI7 657 aa17.2■□□□□ 0.34
TIMP3-201ENST00000266085 CC2D2BQ6DHV5 1058 aa17.2■□□□□ 0.34
TIMP3-201ENST00000266085 FBXO11Q86XK2 927 aa17.2■□□□□ 0.34
TIMP3-201ENST00000266085 IFT74Q96LB3 600 aa17.2■□□□□ 0.34
TIMP3-201ENST00000266085 NT5C3AQ9H0P0 336 aa17.2■□□□□ 0.34
TIMP3-201ENST00000266085 PTPRMP28827 1452 aa17.2■□□□□ 0.34
TIMP3-201ENST00000266085 CYP2D7A0A087X1C5 515 aa17.2■□□□□ 0.34
TIMP3-201ENST00000266085 DDX12PQ92771 950 aa17.2■□□□□ 0.34
TIMP3-201ENST00000266085 SPDYE4A6NLX3 237 aa17.2■□□□□ 0.34
TIMP3-201ENST00000266085 NR1I2O75469 434 aa17.2■□□□□ 0.34
TIMP3-201ENST00000266085 KRT222Q8N1A0 295 aa17.2■□□□□ 0.34
TIMP3-201ENST00000266085 ATF5Q9Y2D1 282 aaPredicted RBP17.2■□□□□ 0.34
TIMP3-201ENST00000266085 PCDHA1Q9Y5I3 950 aa17.2■□□□□ 0.34
TIMP3-201ENST00000266085 GAS7O60861 476 aa17.19■□□□□ 0.34
TIMP3-201ENST00000266085 KRT9P35527 623 aa17.19■□□□□ 0.34
TIMP3-201ENST00000266085 TRMT44Q8IYL2 757 aaKnown RBP17.19■□□□□ 0.34
TIMP3-201ENST00000266085 CLTCQ00610 1675 aaKnown RBP17.19■□□□□ 0.34
TIMP3-201ENST00000266085 LRRC7Q96NW7 1537 aa17.19■□□□□ 0.34
TIMP3-201ENST00000266085 USP17L8P0C7I0 530 aa17.19■□□□□ 0.34
TIMP3-201ENST00000266085 NPR1P16066 1061 aa17.19■□□□□ 0.34
TIMP3-201ENST00000266085 CMA1P23946 247 aa17.19■□□□□ 0.34
TIMP3-201ENST00000266085 NEK8Q86SG6 692 aa17.19■□□□□ 0.34
TIMP3-201ENST00000266085 CCDC155Q8N6L0 562 aa17.19■□□□□ 0.34
TIMP3-201ENST00000266085 ISCA1Q9BUE6 129 aa17.19■□□□□ 0.34
TIMP3-201ENST00000266085 AS3MTQ9HBK9 375 aa17.19■□□□□ 0.34
TIMP3-201ENST00000266085 ZSWIM5Q9P217 1185 aa17.19■□□□□ 0.34
TIMP3-201ENST00000266085 IMPACTQ9P2X3 320 aa17.19■□□□□ 0.34
TIMP3-201ENST00000266085 PCDHA12Q9UN75 941 aa17.19■□□□□ 0.34
TIMP3-201ENST00000266085 IKBKGQ9Y6K9 419 aa17.19■□□□□ 0.34
TIMP3-201ENST00000266085 ADAMTS13Q76LX8 1427 aa17.19■□□□□ 0.34
TIMP3-201ENST00000266085 GJC1P36383 396 aa17.19■□□□□ 0.34
TIMP3-201ENST00000266085 PNOCQ13519 176 aa17.19■□□□□ 0.34
TIMP3-201ENST00000266085 NELFCDQ8IXH7 590 aa17.19■□□□□ 0.34
TIMP3-201ENST00000266085 SPICE1Q8N0Z3 855 aa17.19■□□□□ 0.34
TIMP3-201ENST00000266085 NSUN7Q8NE18 718 aaKnown RBP17.19■□□□□ 0.34
TIMP3-201ENST00000266085 PPP1R9BQ96SB3 815 aa17.19■□□□□ 0.34
TIMP3-201ENST00000266085 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.19■□□□□ 0.34
TIMP3-201ENST00000266085 COL15A1P39059 1388 aa17.19■□□□□ 0.34
TIMP3-201ENST00000266085 CRB1P82279 1406 aa17.19■□□□□ 0.34
TIMP3-201ENST00000266085 TUBBP07437 444 aa17.19■□□□□ 0.34
TIMP3-201ENST00000266085 MECOMQ03112 1051 aa17.19■□□□□ 0.34
TIMP3-201ENST00000266085 NECTIN1Q15223 517 aa17.19■□□□□ 0.34
TIMP3-201ENST00000266085 PRR16Q569H4 304 aa17.19■□□□□ 0.34
TIMP3-201ENST00000266085 SULF1Q8IWU6 871 aa17.19■□□□□ 0.34
TIMP3-201ENST00000266085 TPH2Q8IWU9 490 aa17.19■□□□□ 0.34
TIMP3-201ENST00000266085 MYCT1Q8N699 235 aa17.19■□□□□ 0.34
TIMP3-201ENST00000266085 MSANTD4Q8NCY6 345 aa17.19■□□□□ 0.34
TIMP3-201ENST00000266085 ARHGEF1Q92888 912 aaKnown RBP17.19■□□□□ 0.34
TIMP3-201ENST00000266085 NUP58Q9BVL2 599 aa17.19■□□□□ 0.34
TIMP3-201ENST00000266085 ATP6V0A2Q9Y487 856 aa17.19■□□□□ 0.34
TIMP3-201ENST00000266085 CALUO43852 315 aaPredicted RBP17.18■□□□□ 0.34
TIMP3-201ENST00000266085 PLCB3Q01970 1234 aa17.18■□□□□ 0.34
TIMP3-201ENST00000266085 GJD4Q96KN9 370 aaPredicted RBP17.18■□□□□ 0.34
TIMP3-201ENST00000266085 PAGR1Q9BTK6 254 aa17.18■□□□□ 0.34
TIMP3-201ENST00000266085 PCDHA7Q9UN72 937 aa17.18■□□□□ 0.34
TIMP3-201ENST00000266085 INO80Q9ULG1 1556 aaPredicted RBP17.18■□□□□ 0.34
TIMP3-201ENST00000266085 TECP42680 631 aa17.18■□□□□ 0.34
TIMP3-201ENST00000266085 GALNT17Q6IS24 598 aa17.18■□□□□ 0.34
TIMP3-201ENST00000266085 NLRX1Q86UT6 975 aa17.18■□□□□ 0.34
TIMP3-201ENST00000266085 CCDC84Q86UT8 332 aaPredicted RBP17.18■□□□□ 0.34
TIMP3-201ENST00000266085 CELF1Q92879 486 aaKnown RBP17.18■□□□□ 0.34
TIMP3-201ENST00000266085 TAB2Q9NYJ8 693 aa17.18■□□□□ 0.34
TIMP3-201ENST00000266085 TMEM110-MUSTN1A8MSY1 372 aa17.18■□□□□ 0.34
TIMP3-201ENST00000266085 SLFNL1Q499Z3 407 aa17.18■□□□□ 0.34
TIMP3-201ENST00000266085 BRDTQ58F21 947 aaPredicted RBP17.18■□□□□ 0.34
TIMP3-201ENST00000266085 TSGA10Q9BZW7 698 aa17.18■□□□□ 0.34
TIMP3-201ENST00000266085 PRDM10Q9NQV6 1147 aa17.18■□□□□ 0.34
TIMP3-201ENST00000266085 MINPP1Q9UNW1 487 aa17.18■□□□□ 0.34
TIMP3-201ENST00000266085 LMAN1P49257 510 aa17.17■□□□□ 0.34
TIMP3-201ENST00000266085 WDR44Q5JSH3 913 aa17.17■□□□□ 0.34
TIMP3-201ENST00000266085 MCTP2Q6DN12 878 aa17.17■□□□□ 0.34
TIMP3-201ENST00000266085 CYP26C1Q6V0L0 522 aa17.17■□□□□ 0.34
TIMP3-201ENST00000266085 RNF26Q9BY78 433 aaPredicted RBP17.17■□□□□ 0.34
TIMP3-201ENST00000266085 EXOC7Q9UPT5 735 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms