RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 PSTPIP2Q9H939 334 aa15.6■□□□□ 0.09
CDH3-201ENST00000264012 NCAPD2Q15021 1401 aa15.6■□□□□ 0.09
CDH3-201ENST00000264012 KRT5P13647 590 aa15.6■□□□□ 0.09
CDH3-201ENST00000264012 CLIC6Q96NY7 704 aa15.6■□□□□ 0.09
CDH3-201ENST00000264012 TRERF1Q96PN7 1200 aa15.6■□□□□ 0.09
CDH3-201ENST00000264012 PUS7LQ9H0K6 701 aaKnown RBP15.6■□□□□ 0.09
CDH3-201ENST00000264012 EXOC7Q9UPT5 735 aa15.6■□□□□ 0.09
CDH3-201ENST00000264012 CLIC4Q9Y696 253 aa15.6■□□□□ 0.09
CDH3-201ENST00000264012 A0A1W2PRG0 241 aa15.6■□□□□ 0.09
CDH3-201ENST00000264012 QTRT2Q9H974 415 aaKnown RBP15.6■□□□□ 0.09
CDH3-201ENST00000264012 IGKV5-2P06315 115 aa15.59■□□□□ 0.09
CDH3-201ENST00000264012 ASIC2Q16515 512 aa15.59■□□□□ 0.09
CDH3-201ENST00000264012 SLC9C1Q4G0N8 1177 aa15.59■□□□□ 0.09
CDH3-201ENST00000264012 CCDC84Q86UT8 332 aaPredicted RBP15.59■□□□□ 0.09
CDH3-201ENST00000264012 FNBP4Q8N3X1 1017 aaPredicted RBP15.59■□□□□ 0.09
CDH3-201ENST00000264012 JAKMIP2Q96AA8 810 aa15.59■□□□□ 0.09
CDH3-201ENST00000264012 CERKLQ49MI3 558 aaPredicted RBP15.59■□□□□ 0.09
CDH3-201ENST00000264012 KRBA2Q6ZNG9 492 aa15.59■□□□□ 0.09
CDH3-201ENST00000264012 NEK8Q86SG6 692 aa15.59■□□□□ 0.09
CDH3-201ENST00000264012 NDUFA8P51970 172 aa15.59■□□□□ 0.09
CDH3-201ENST00000264012 GALNT17Q6IS24 598 aa15.59■□□□□ 0.09
CDH3-201ENST00000264012 TTLL11Q8NHH1 800 aa15.59■□□□□ 0.09
CDH3-201ENST00000264012 MRPL44Q9H9J2 332 aaKnown RBP15.59■□□□□ 0.09
CDH3-201ENST00000264012 ATP2A1O14983 1001 aa15.58■□□□□ 0.09
CDH3-201ENST00000264012 GCNT3O95395 438 aa15.58■□□□□ 0.09
CDH3-201ENST00000264012 DYNLL1P63167 89 aaKnown RBP15.58■□□□□ 0.09
CDH3-201ENST00000264012 CNKSR1Q969H4 720 aa15.58■□□□□ 0.09
CDH3-201ENST00000264012 RTEL1Q9NZ71 1219 aa15.58■□□□□ 0.09
CDH3-201ENST00000264012 CDC42BPGQ6DT37 1551 aa15.58■□□□□ 0.09
CDH3-201ENST00000264012 SPHKAPQ2M3C7 1700 aa15.58■□□□□ 0.09
CDH3-201ENST00000264012 EXOC3O60645 756 aa15.58■□□□□ 0.09
CDH3-201ENST00000264012 SERPINB2P05120 415 aa15.58■□□□□ 0.09
CDH3-201ENST00000264012 TECP42680 631 aa15.58■□□□□ 0.09
CDH3-201ENST00000264012 KIFAP3Q92845 792 aa15.58■□□□□ 0.09
CDH3-201ENST00000264012 MTUS1Q9ULD2 1270 aa15.58■□□□□ 0.09
CDH3-201ENST00000264012 OR52Z1P0C646 297 aa15.58■□□□□ 0.08
CDH3-201ENST00000264012 ZNF827Q17R98 1081 aa15.58■□□□□ 0.08
CDH3-201ENST00000264012 CARMIL3Q8ND23 1372 aa15.58■□□□□ 0.08
CDH3-201ENST00000264012 PRKAB2O43741 272 aa15.58■□□□□ 0.08
CDH3-201ENST00000264012 ICA1Q05084 483 aa15.58■□□□□ 0.08
CDH3-201ENST00000264012 TNFAIP1Q13829 316 aa15.58■□□□□ 0.08
CDH3-201ENST00000264012 RIOK3O14730 519 aaKnown RBP15.57■□□□□ 0.08
CDH3-201ENST00000264012 STRN3Q13033 797 aa15.57■□□□□ 0.08
CDH3-201ENST00000264012 PTGDRQ13258 359 aa15.57■□□□□ 0.08
CDH3-201ENST00000264012 EPHA10Q5JZY3 1008 aa15.57■□□□□ 0.08
CDH3-201ENST00000264012 ZBTB9Q96C00 473 aa15.57■□□□□ 0.08
CDH3-201ENST00000264012 A0A1W2PQ27 194 aa15.57■□□□□ 0.08
CDH3-201ENST00000264012 A0A1W2PQ64 194 aa15.57■□□□□ 0.08
CDH3-201ENST00000264012 A0A1W2PQD8 194 aa15.57■□□□□ 0.08
CDH3-201ENST00000264012 GAS7O60861 476 aa15.57■□□□□ 0.08
CDH3-201ENST00000264012 MAGEA1P43355 309 aa15.57■□□□□ 0.08
CDH3-201ENST00000264012 TPH2Q8IWU9 490 aa15.57■□□□□ 0.08
CDH3-201ENST00000264012 LCORLQ8N3X6 602 aa15.57■□□□□ 0.08
CDH3-201ENST00000264012 OGFRQ9NZT2 677 aa15.57■□□□□ 0.08
CDH3-201ENST00000264012 PCDHA12Q9UN75 941 aa15.57■□□□□ 0.08
CDH3-201ENST00000264012 KDM3AQ9Y4C1 1321 aa15.57■□□□□ 0.08
CDH3-201ENST00000264012 NOP56O00567 594 aaKnown RBP15.57■□□□□ 0.08
CDH3-201ENST00000264012 RNF26Q9BY78 433 aaPredicted RBP15.57■□□□□ 0.08
CDH3-201ENST00000264012 SLC39A14Q15043 492 aa15.57■□□□□ 0.08
CDH3-201ENST00000264012 GPIHBP1Q8IV16 184 aa15.57■□□□□ 0.08
CDH3-201ENST00000264012 CARD6Q9BX69 1037 aa15.57■□□□□ 0.08
CDH3-201ENST00000264012 ADGRL3Q9HAR2 1447 aa15.57■□□□□ 0.08
CDH3-201ENST00000264012 TCP10L2B9ZVM9 353 aa15.56■□□□□ 0.08
CDH3-201ENST00000264012 SPOPO43791 374 aa15.56■□□□□ 0.08
CDH3-201ENST00000264012 TRIM37O94972 964 aa15.56■□□□□ 0.08
CDH3-201ENST00000264012 NECTIN1Q15223 517 aa15.56■□□□□ 0.08
CDH3-201ENST00000264012 LONRF3Q496Y0 759 aa15.56■□□□□ 0.08
CDH3-201ENST00000264012 SUSD4Q5VX71 490 aa15.56■□□□□ 0.08
CDH3-201ENST00000264012 SECISBP2LQ93073 1101 aaKnown RBP15.56■□□□□ 0.08
CDH3-201ENST00000264012 SLF1Q9BQI6 1058 aa15.56■□□□□ 0.08
CDH3-201ENST00000264012 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.56■□□□□ 0.08
CDH3-201ENST00000264012 TUBB2AQ13885 445 aa15.56■□□□□ 0.08
CDH3-201ENST00000264012 PRR16Q569H4 304 aa15.56■□□□□ 0.08
CDH3-201ENST00000264012 GAS2L3Q86XJ1 694 aa15.56■□□□□ 0.08
CDH3-201ENST00000264012 TRIML1Q8N9V2 468 aa15.56■□□□□ 0.08
CDH3-201ENST00000264012 NOX5Q96PH1 765 aa15.56■□□□□ 0.08
CDH3-201ENST00000264012 TUBB2BQ9BVA1 445 aa15.56■□□□□ 0.08
CDH3-201ENST00000264012 ZNF408Q9H9D4 720 aa15.56■□□□□ 0.08
CDH3-201ENST00000264012 FAM207AQ9NSI2 230 aaPredicted RBP15.56■□□□□ 0.08
CDH3-201ENST00000264012 RBM6P78332 1123 aaKnown RBP15.56■□□□□ 0.08
CDH3-201ENST00000264012 SEL1L2Q5TEA6 688 aa15.56■□□□□ 0.08
CDH3-201ENST00000264012 ATRIPQ8WXE1 791 aa15.56■□□□□ 0.08
CDH3-201ENST00000264012 MTRF1LQ9UGC7 380 aaKnown RBP15.56■□□□□ 0.08
CDH3-201ENST00000264012 PNPLA6Q8IY17 1366 aa15.56■□□□□ 0.08
CDH3-201ENST00000264012 PPEF1O14829 653 aaPredicted RBP15.56■□□□□ 0.08
CDH3-201ENST00000264012 BBOX1O75936 387 aa15.56■□□□□ 0.08
CDH3-201ENST00000264012 MCTP2Q6DN12 878 aa15.56■□□□□ 0.08
CDH3-201ENST00000264012 IVNS1ABPQ9Y6Y0 642 aa15.56■□□□□ 0.08
CDH3-201ENST00000264012 H7C1D1 291 aa15.55■□□□□ 0.08
CDH3-201ENST00000264012 RASGRF1Q13972 1273 aa15.55■□□□□ 0.08
CDH3-201ENST00000264012 PPP1R7Q15435 360 aa15.55■□□□□ 0.08
CDH3-201ENST00000264012 SLFN13Q68D06 897 aa15.55■□□□□ 0.08
CDH3-201ENST00000264012 GPBP1Q86WP2 473 aa15.55■□□□□ 0.08
CDH3-201ENST00000264012 PPP1R14CQ8TAE6 165 aa15.55■□□□□ 0.08
CDH3-201ENST00000264012 ADKP55263 362 aaKnown RBP15.55■□□□□ 0.08
CDH3-201ENST00000264012 CALCOCO2Q13137 446 aa15.55■□□□□ 0.08
CDH3-201ENST00000264012 MYRIPQ8NFW9 859 aa15.55■□□□□ 0.08
CDH3-201ENST00000264012 IQCGQ9H095 443 aaKnown RBP15.55■□□□□ 0.08
CDH3-201ENST00000264012 FOXP1Q9H334 677 aaPredicted RBP15.55■□□□□ 0.08
CDH3-201ENST00000264012 STX10O60499 249 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms