RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 PDCD2Q16342 344 aaPredicted RBP18.17■□□□□ 0.5
USP13-201ENST00000263966 RUFY4Q6ZNE9 571 aa18.17■□□□□ 0.5
USP13-201ENST00000263966 NUB1Q9Y5A7 615 aa18.17■□□□□ 0.5
USP13-201ENST00000263966 SPECC1L-ADORA2AF8WAN1 911 aa18.16■□□□□ 0.5
USP13-201ENST00000263966 ECE1P42892 770 aa18.16■□□□□ 0.5
USP13-201ENST00000263966 GOLGA8FQ08AF8 430 aa18.16■□□□□ 0.5
USP13-201ENST00000263966 GOLGA8DPQ0D2H9 430 aa18.16■□□□□ 0.5
USP13-201ENST00000263966 HELLSQ9NRZ9 838 aa18.16■□□□□ 0.5
USP13-201ENST00000263966 RNF8O76064 485 aa18.16■□□□□ 0.5
USP13-201ENST00000263966 KRT25Q7Z3Z0 450 aa18.16■□□□□ 0.5
USP13-201ENST00000263966 GDPD2Q9HCC8 539 aa18.16■□□□□ 0.5
USP13-201ENST00000263966 GRK7Q8WTQ7 553 aa18.16■□□□□ 0.5
USP13-201ENST00000263966 CDK13Q14004 1512 aaKnown RBP18.16■□□□□ 0.5
USP13-201ENST00000263966 TRIM27P14373 513 aa18.16■□□□□ 0.5
USP13-201ENST00000263966 DHX32Q7L7V1 743 aaKnown RBP18.16■□□□□ 0.5
USP13-201ENST00000263966 TSKSQ9UJT2 592 aa18.16■□□□□ 0.5
USP13-201ENST00000263966 ANXA13P27216 316 aa18.16■□□□□ 0.5
USP13-201ENST00000263966 C8orf74Q6P047 294 aa18.16■□□□□ 0.5
USP13-201ENST00000263966 NBPF11Q86T75 865 aa18.16■□□□□ 0.5
USP13-201ENST00000263966 PNMA8AQ86V59 439 aaPredicted RBP18.16■□□□□ 0.5
USP13-201ENST00000263966 SLFN12Q8IYM2 578 aa18.16■□□□□ 0.5
USP13-201ENST00000263966 IFT122Q9HBG6 1241 aa18.16■□□□□ 0.5
USP13-201ENST00000263966 MRPL11Q9Y3B7 192 aaKnown RBP18.16■□□□□ 0.5
USP13-201ENST00000263966 M0R2C6 588 aa18.16■□□□□ 0.5
USP13-201ENST00000263966 OCM2P0CE71 109 aa18.16■□□□□ 0.5
USP13-201ENST00000263966 OCMP0CE72 109 aaPredicted RBP18.16■□□□□ 0.5
USP13-201ENST00000263966 CIITAP33076 1130 aa18.16■□□□□ 0.5
USP13-201ENST00000263966 NOP14P78316 857 aaKnown RBP18.16■□□□□ 0.5
USP13-201ENST00000263966 FAM102BQ5T8I3 360 aa18.16■□□□□ 0.5
USP13-201ENST00000263966 RNF219Q5W0B1 726 aaPredicted RBP18.16■□□□□ 0.5
USP13-201ENST00000263966 CTTNBP2NLQ9P2B4 639 aa18.16■□□□□ 0.5
USP13-201ENST00000263966 NME8Q8N427 588 aa18.15■□□□□ 0.5
USP13-201ENST00000263966 RIC8AQ9NPQ8 531 aa18.15■□□□□ 0.5
USP13-201ENST00000263966 AATFQ9NY61 560 aaKnown RBP eCLIP18.15■□□□□ 0.5
USP13-201ENST00000263966 TEKT2Q9UIF3 430 aa18.15■□□□□ 0.5
USP13-201ENST00000263966 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.15■□□□□ 0.5
USP13-201ENST00000263966 TBCCQ15814 346 aa18.15■□□□□ 0.5
USP13-201ENST00000263966 IQCDQ96DY2 449 aa18.15■□□□□ 0.5
USP13-201ENST00000263966 ZNF215Q9UL58 517 aaPredicted RBP18.15■□□□□ 0.5
USP13-201ENST00000263966 PCDHB13Q9Y5F0 798 aa18.15■□□□□ 0.5
USP13-201ENST00000263966 IFNA8P32881 189 aa18.15■□□□□ 0.5
USP13-201ENST00000263966 MAPK8IP2Q13387 824 aaPredicted RBP18.15■□□□□ 0.5
USP13-201ENST00000263966 SLC39A6Q13433 755 aa18.15■□□□□ 0.5
USP13-201ENST00000263966 ANKRD20A3Q5VUR7 823 aa18.15■□□□□ 0.5
USP13-201ENST00000263966 MAP3K5Q99683 1374 aa18.15■□□□□ 0.5
USP13-201ENST00000263966 SH3TC1Q8TE82 1336 aa18.15■□□□□ 0.5
USP13-201ENST00000263966 PDE8AO60658 829 aa18.15■□□□□ 0.5
USP13-201ENST00000263966 CCDC105Q8IYK2 499 aa18.15■□□□□ 0.5
USP13-201ENST00000263966 LZTFL1Q9NQ48 299 aa18.15■□□□□ 0.5
USP13-201ENST00000263966 PPP4R4Q6NUP7 873 aa18.15■□□□□ 0.5
USP13-201ENST00000263966 GIMAP6Q6P9H5 292 aa18.15■□□□□ 0.5
USP13-201ENST00000263966 DONSONQ9NYP3 566 aa18.15■□□□□ 0.5
USP13-201ENST00000263966 MMEL1Q495T6 779 aa18.15■□□□□ 0.5
USP13-201ENST00000263966 MBIPQ9NS73 344 aa18.15■□□□□ 0.5
USP13-201ENST00000263966 EPS15L1Q9UBC2 864 aa18.15■□□□□ 0.5
USP13-201ENST00000263966 FNDC3AQ9Y2H6 1198 aaKnown RBP18.15■□□□□ 0.5
USP13-201ENST00000263966 EIF3CLB5ME19 914 aaKnown RBP18.15■□□□□ 0.5
USP13-201ENST00000263966 EIF3CQ99613 913 aaKnown RBP18.15■□□□□ 0.5
USP13-201ENST00000263966 C1orf112Q9NSG2 853 aa18.15■□□□□ 0.5
USP13-201ENST00000263966 CPSF2Q9P2I0 782 aaKnown RBP18.15■□□□□ 0.5
USP13-201ENST00000263966 ADD3Q9UEY8 706 aaKnown RBP18.15■□□□□ 0.5
USP13-201ENST00000263966 KDM5BQ9UGL1 1544 aa18.14■□□□□ 0.5
USP13-201ENST00000263966 SUPT20HL1Q3ZLR7 823 aa18.14■□□□□ 0.5
USP13-201ENST00000263966 PDZD8Q8NEN9 1154 aa18.14■□□□□ 0.5
USP13-201ENST00000263966 Q9H521 79 aa18.14■□□□□ 0.5
USP13-201ENST00000263966 MBD4O95243 580 aa18.14■□□□□ 0.49
USP13-201ENST00000263966 PPP2R5EQ16537 467 aa18.14■□□□□ 0.49
USP13-201ENST00000263966 TMCO4Q5TGY1 634 aa18.14■□□□□ 0.49
USP13-201ENST00000263966 SMC5Q8IY18 1101 aa18.14■□□□□ 0.49
USP13-201ENST00000263966 BRPF3Q9ULD4 1205 aa18.14■□□□□ 0.49
USP13-201ENST00000263966 SOS1Q07889 1333 aaPredicted RBP18.14■□□□□ 0.49
USP13-201ENST00000263966 MIER3Q7Z3K6 550 aa18.14■□□□□ 0.49
USP13-201ENST00000263966 SESTD1Q86VW0 696 aa18.14■□□□□ 0.49
USP13-201ENST00000263966 FNBP4Q8N3X1 1017 aaPredicted RBP18.14■□□□□ 0.49
USP13-201ENST00000263966 RAB20Q9NX57 234 aa18.14■□□□□ 0.49
USP13-201ENST00000263966 GTF2A1P52655 376 aaPredicted RBP18.14■□□□□ 0.49
USP13-201ENST00000263966 SCYL2Q6P3W7 929 aa18.14■□□□□ 0.49
USP13-201ENST00000263966 TPH2Q8IWU9 490 aa18.14■□□□□ 0.49
USP13-201ENST00000263966 NECAB1Q8N987 351 aa18.14■□□□□ 0.49
USP13-201ENST00000263966 PSDA5PKW4 1024 aaPredicted RBP18.14■□□□□ 0.49
USP13-201ENST00000263966 EIF3DO15371 548 aaKnown RBP eCLIP18.14■□□□□ 0.49
USP13-201ENST00000263966 REXO1Q8N1G1 1221 aaKnown RBP18.14■□□□□ 0.49
USP13-201ENST00000263966 MICALL1Q8N3F8 863 aa18.14■□□□□ 0.49
USP13-201ENST00000263966 HELBQ8NG08 1087 aaPredicted RBP18.14■□□□□ 0.49
USP13-201ENST00000263966 CDKL2Q92772 493 aa18.14■□□□□ 0.49
USP13-201ENST00000263966 MROH5Q6ZUA9 1318 aa18.14■□□□□ 0.49
USP13-201ENST00000263966 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.14■□□□□ 0.49
USP13-201ENST00000263966 SETSIPP0DME0 302 aa18.13■□□□□ 0.49
USP13-201ENST00000263966 HERC4Q5GLZ8 1057 aaPredicted RBP18.13■□□□□ 0.49
USP13-201ENST00000263966 ZRANB1Q9UGI0 708 aa18.13■□□□□ 0.49
USP13-201ENST00000263966 NUDT18Q6ZVK8 323 aa18.13■□□□□ 0.49
USP13-201ENST00000263966 AKT3Q9Y243 479 aa18.13■□□□□ 0.49
USP13-201ENST00000263966 SYNRGQ9UMZ2 1314 aa18.13■□□□□ 0.49
USP13-201ENST00000263966 ZNF174Q15697 407 aa18.13■□□□□ 0.49
USP13-201ENST00000263966 NOS1P29475 1434 aa18.13■□□□□ 0.49
USP13-201ENST00000263966 STX17P56962 302 aa18.13■□□□□ 0.49
USP13-201ENST00000263966 CCDC93Q567U6 631 aa18.13■□□□□ 0.49
USP13-201ENST00000263966 TEX12Q9BXU0 123 aa18.13■□□□□ 0.49
USP13-201ENST00000263966 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.13■□□□□ 0.49
USP13-201ENST00000263966 CSGALNACT2Q8N6G5 542 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms