RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 ENGASEQ8NFI3 743 aa18.22■□□□□ 0.51
VPS26A-201ENST00000263559 GNAQP50148 359 aa18.22■□□□□ 0.51
VPS26A-201ENST00000263559 RASGRP2Q7LDG7 609 aa18.22■□□□□ 0.51
VPS26A-201ENST00000263559 TDRD3Q9H7E2 651 aaKnown RBP18.22■□□□□ 0.51
VPS26A-201ENST00000263559 SIPA1L1O43166 1804 aa18.21■□□□□ 0.51
VPS26A-201ENST00000263559 DDTLA6NHG4 134 aaPredicted RBP18.21■□□□□ 0.51
VPS26A-201ENST00000263559 PSMD14O00487 310 aa18.21■□□□□ 0.51
VPS26A-201ENST00000263559 SLC35G1Q2M3R5 365 aa18.21■□□□□ 0.51
VPS26A-201ENST00000263559 AXDND1Q5T1B0 1012 aaPredicted RBP18.21■□□□□ 0.51
VPS26A-201ENST00000263559 RSBN1LQ6PCB5 846 aaPredicted RBP18.21■□□□□ 0.51
VPS26A-201ENST00000263559 CKAP2LQ8IYA6 745 aa18.21■□□□□ 0.51
VPS26A-201ENST00000263559 MRPS27Q92552 414 aaKnown RBP18.21■□□□□ 0.51
VPS26A-201ENST00000263559 PRMT6Q96LA8 375 aaPredicted RBP18.21■□□□□ 0.51
VPS26A-201ENST00000263559 MTMR4Q9NYA4 1195 aa18.21■□□□□ 0.51
VPS26A-201ENST00000263559 GOLGA8HP0CJ92 632 aa18.21■□□□□ 0.51
VPS26A-201ENST00000263559 KRT2P35908 639 aa18.21■□□□□ 0.51
VPS26A-201ENST00000263559 FAM160A1Q05DH4 1040 aa18.21■□□□□ 0.51
VPS26A-201ENST00000263559 NPY5RQ15761 445 aa18.21■□□□□ 0.51
VPS26A-201ENST00000263559 EHD4Q9H223 541 aa18.21■□□□□ 0.51
VPS26A-201ENST00000263559 CABP5Q9NP86 173 aa18.21■□□□□ 0.51
VPS26A-201ENST00000263559 MYO3BQ8WXR4 1341 aa18.2■□□□□ 0.5
VPS26A-201ENST00000263559 IGKV6D-41A0A0C4DH26 115 aa18.2■□□□□ 0.5
VPS26A-201ENST00000263559 A0A1B0GVL5 298 aa18.2■□□□□ 0.5
VPS26A-201ENST00000263559 CYTH3O43739 400 aa18.2■□□□□ 0.5
VPS26A-201ENST00000263559 VIL1P09327 827 aaKnown RBP18.2■□□□□ 0.5
VPS26A-201ENST00000263559 R3HDM1Q15032 1099 aaKnown RBP18.2■□□□□ 0.5
VPS26A-201ENST00000263559 RILPL1Q5EBL4 403 aa18.2■□□□□ 0.5
VPS26A-201ENST00000263559 SOGA3Q5TF21 947 aa18.2■□□□□ 0.5
VPS26A-201ENST00000263559 RBM43Q6ZSC3 357 aaKnown RBP18.2■□□□□ 0.5
VPS26A-201ENST00000263559 SH3BP5LQ7L8J4 393 aa18.2■□□□□ 0.5
VPS26A-201ENST00000263559 DHX36Q9H2U1 1008 aaKnown RBP18.2■□□□□ 0.5
VPS26A-201ENST00000263559 PPP6R2O75170 966 aa18.2■□□□□ 0.5
VPS26A-201ENST00000263559 VPS33BQ9H267 617 aa18.2■□□□□ 0.5
VPS26A-201ENST00000263559 NPM3O75607 178 aaKnown RBP18.19■□□□□ 0.5
VPS26A-201ENST00000263559 USP17L2Q6R6M4 530 aa18.19■□□□□ 0.5
VPS26A-201ENST00000263559 DNAJC18Q9H819 358 aa18.19■□□□□ 0.5
VPS26A-201ENST00000263559 PPP1R1BQ9UD71 204 aaPredicted RBP18.19■□□□□ 0.5
VPS26A-201ENST00000263559 BRCA1P38398 1863 aaKnown RBP18.19■□□□□ 0.5
VPS26A-201ENST00000263559 FAM205CA6NFA0 338 aa18.19■□□□□ 0.5
VPS26A-201ENST00000263559 KLRF2D3W0D1 207 aa18.19■□□□□ 0.5
VPS26A-201ENST00000263559 EIF6P56537 245 aaKnown RBP18.19■□□□□ 0.5
VPS26A-201ENST00000263559 DALRD3Q5D0E6 543 aaKnown RBP18.19■□□□□ 0.5
VPS26A-201ENST00000263559 EARS2Q5JPH6 523 aaKnown RBP18.19■□□□□ 0.5
VPS26A-201ENST00000263559 CLEC10AQ8IUN9 316 aa18.19■□□□□ 0.5
VPS26A-201ENST00000263559 ZSCAN29Q8IWY8 852 aaPredicted RBP18.19■□□□□ 0.5
VPS26A-201ENST00000263559 FMR1NBQ8N0W7 255 aaPredicted RBP18.19■□□□□ 0.5
VPS26A-201ENST00000263559 GMLQ99445 158 aa18.19■□□□□ 0.5
VPS26A-201ENST00000263559 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.19■□□□□ 0.5
VPS26A-201ENST00000263559 PARP1P09874 1014 aaKnown RBP18.18■□□□□ 0.5
VPS26A-201ENST00000263559 NDUFA8P51970 172 aa18.18■□□□□ 0.5
VPS26A-201ENST00000263559 JMYQ8N9B5 988 aa18.18■□□□□ 0.5
VPS26A-201ENST00000263559 LZTS2Q9BRK4 669 aa18.18■□□□□ 0.5
VPS26A-201ENST00000263559 CPVLQ9H3G5 476 aa18.18■□□□□ 0.5
VPS26A-201ENST00000263559 PI4KBQ9UBF8 816 aa18.18■□□□□ 0.5
VPS26A-201ENST00000263559 ZBTB12Q9Y330 459 aaPredicted RBP18.18■□□□□ 0.5
VPS26A-201ENST00000263559 FAM196BA6NMK8 535 aa18.18■□□□□ 0.5
VPS26A-201ENST00000263559 CCDC192P0DO97 292 aa18.18■□□□□ 0.5
VPS26A-201ENST00000263559 NLRP5P59047 1200 aa18.18■□□□□ 0.5
VPS26A-201ENST00000263559 GPKOWQ92917 476 aaPredicted RBP eCLIP18.18■□□□□ 0.52e-6■■□□□ 13
VPS26A-201ENST00000263559 BRMS1Q9HCU9 246 aa18.18■□□□□ 0.5
VPS26A-201ENST00000263559 ZNRF3Q9ULT6 936 aa18.18■□□□□ 0.5
VPS26A-201ENST00000263559 PCDHB6Q9Y5E3 794 aa18.18■□□□□ 0.5
VPS26A-201ENST00000263559 GREB1LQ9C091 1923 aaPredicted RBP18.18■□□□□ 0.5
VPS26A-201ENST00000263559 USP17L5A8MUK1 530 aa18.17■□□□□ 0.5
VPS26A-201ENST00000263559 KINO60870 393 aaKnown RBP18.17■□□□□ 0.5
VPS26A-201ENST00000263559 CMA1P23946 247 aa18.17■□□□□ 0.5
VPS26A-201ENST00000263559 NIM1KQ8IY84 436 aa18.17■□□□□ 0.5
VPS26A-201ENST00000263559 TNFRSF25Q93038 417 aa18.17■□□□□ 0.5
VPS26A-201ENST00000263559 CLIP2Q9UDT6 1046 aa18.17■□□□□ 0.5
VPS26A-201ENST00000263559 MPHOSPH10O00566 681 aaKnown RBP18.17■□□□□ 0.5
VPS26A-201ENST00000263559 ATP2B1P20020 1258 aa18.17■□□□□ 0.5
VPS26A-201ENST00000263559 LRRC47Q8N1G4 583 aaKnown RBP18.17■□□□□ 0.5
VPS26A-201ENST00000263559 ANP32BQ92688 251 aaKnown RBP18.17■□□□□ 0.5
VPS26A-201ENST00000263559 FER1L6Q2WGJ9 1857 aa18.17■□□□□ 0.5
VPS26A-201ENST00000263559 TTLL1O95922 423 aa18.16■□□□□ 0.5
VPS26A-201ENST00000263559 NOM1Q5C9Z4 860 aaKnown RBP18.16■□□□□ 0.5
VPS26A-201ENST00000263559 CLIC6Q96NY7 704 aa18.16■□□□□ 0.5
VPS26A-201ENST00000263559 SPZ1Q9BXG8 430 aa18.16■□□□□ 0.5
VPS26A-201ENST00000263559 ADAMTS3O15072 1205 aa18.16■□□□□ 0.5
VPS26A-201ENST00000263559 PDHBP11177 359 aa18.16■□□□□ 0.5
VPS26A-201ENST00000263559 TYRO3Q06418 890 aa18.16■□□□□ 0.5
VPS26A-201ENST00000263559 CCDC17Q96LX7 622 aa18.16■□□□□ 0.5
VPS26A-201ENST00000263559 SH3GLB2Q9NR46 395 aa18.16■□□□□ 0.5
VPS26A-201ENST00000263559 MYH4Q9Y623 1939 aa18.16■□□□□ 0.5
VPS26A-201ENST00000263559 SPDYE2BA6NHP3 402 aa18.16■□□□□ 0.5
VPS26A-201ENST00000263559 ENTPD3O75355 529 aa18.16■□□□□ 0.5
VPS26A-201ENST00000263559 SPDYE6P0CI01 402 aa18.16■□□□□ 0.5
VPS26A-201ENST00000263559 TYW1BQ6NUM6 668 aa18.16■□□□□ 0.5
VPS26A-201ENST00000263559 SHC4Q6S5L8 630 aa18.16■□□□□ 0.5
VPS26A-201ENST00000263559 HDAC9Q9UKV0 1011 aa18.16■□□□□ 0.5
VPS26A-201ENST00000263559 CTAGE5O15320 804 aa18.15■□□□□ 0.5
VPS26A-201ENST00000263559 PFKFB1P16118 471 aa18.15■□□□□ 0.5
VPS26A-201ENST00000263559 FOXP4Q8IVH2 680 aaPredicted RBP18.15■□□□□ 0.5
VPS26A-201ENST00000263559 SGIP1Q9BQI5 828 aa18.15■□□□□ 0.5
VPS26A-201ENST00000263559 MRVI1Q9Y6F6 885 aa18.15■□□□□ 0.5
VPS26A-201ENST00000263559 CUTAO60888 179 aa18.15■□□□□ 0.5
VPS26A-201ENST00000263559 WWC2Q6AWC2 1192 aa18.15■□□□□ 0.5
VPS26A-201ENST00000263559 OGFOD1Q8N543 542 aa18.15■□□□□ 0.5
VPS26A-201ENST00000263559 CXCL9Q07325 125 aa18.14■□□□□ 0.49
VPS26A-201ENST00000263559 DLGAP5Q15398 846 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms