RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 GPR108Q9NPR9 543 aa11.29□□□□□ -0.6
TTC39A-201ENST00000262675 RAI14Q9P0K7 980 aa11.29□□□□□ -0.6
TTC39A-201ENST00000262675 NOL7Q9UMY1 257 aaKnown RBP11.29□□□□□ -0.6
TTC39A-201ENST00000262675 F13A1P00488 732 aa11.28□□□□□ -0.6
TTC39A-201ENST00000262675 ASNSP08243 561 aa11.28□□□□□ -0.6
TTC39A-201ENST00000262675 SPP2Q13103 211 aa11.28□□□□□ -0.6
TTC39A-201ENST00000262675 KRT32Q14532 448 aa11.28□□□□□ -0.6
TTC39A-201ENST00000262675 TEX11Q8IYF3 940 aa11.28□□□□□ -0.6
TTC39A-201ENST00000262675 DEFB118Q96PH6 123 aa11.28□□□□□ -0.6
TTC39A-201ENST00000262675 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.28□□□□□ -0.6
TTC39A-201ENST00000262675 TMOD4Q9NZQ9 345 aa11.28□□□□□ -0.6
TTC39A-201ENST00000262675 LRP2BPQ9P2M1 347 aa11.28□□□□□ -0.6
TTC39A-201ENST00000262675 MORF4L1Q9UBU8 362 aa11.28□□□□□ -0.6
TTC39A-201ENST00000262675 CCDC39Q9UFE4 941 aa11.28□□□□□ -0.6
TTC39A-201ENST00000262675 RPTORQ8N122 1335 aa11.28□□□□□ -0.6
TTC39A-201ENST00000262675 ELNP15502 786 aa11.28□□□□□ -0.6
TTC39A-201ENST00000262675 SYT1P21579 422 aa11.28□□□□□ -0.6
TTC39A-201ENST00000262675 CCDC183Q5T5S1 534 aa11.28□□□□□ -0.6
TTC39A-201ENST00000262675 GPR153Q6NV75 609 aa11.28□□□□□ -0.6
TTC39A-201ENST00000262675 NOL8Q76FK4 1167 aaKnown RBP11.28□□□□□ -0.6
TTC39A-201ENST00000262675 FOXP4Q8IVH2 680 aaPredicted RBP11.28□□□□□ -0.6
TTC39A-201ENST00000262675 SOCS4Q8WXH5 440 aa11.28□□□□□ -0.6
TTC39A-201ENST00000262675 EAF2Q96CJ1 260 aaPredicted RBP11.28□□□□□ -0.6
TTC39A-201ENST00000262675 JAKMIP1Q96N16 626 aaKnown RBP11.28□□□□□ -0.6
TTC39A-201ENST00000262675 TRIM34Q9BYJ4 488 aa11.28□□□□□ -0.6
TTC39A-201ENST00000262675 HMX1Q9NP08 348 aaPredicted RBP11.28□□□□□ -0.6
TTC39A-201ENST00000262675 FOCADQ5VW36 1801 aa11.27□□□□□ -0.6
TTC39A-201ENST00000262675 ATP5JP18859 108 aa11.27□□□□□ -0.6
TTC39A-201ENST00000262675 HOXA7P31268 230 aaPredicted RBP11.27□□□□□ -0.6
TTC39A-201ENST00000262675 BMP8BP34820 402 aa11.27□□□□□ -0.6
TTC39A-201ENST00000262675 PPP4CP60510 307 aa11.27□□□□□ -0.6
TTC39A-201ENST00000262675 IRX3P78415 501 aaPredicted RBP11.27□□□□□ -0.6
TTC39A-201ENST00000262675 CCDC158Q5M9N0 1113 aa11.27□□□□□ -0.6
TTC39A-201ENST00000262675 TREML2Q5T2D2 321 aa11.27□□□□□ -0.6
TTC39A-201ENST00000262675 CREB3L3Q68CJ9 461 aa11.27□□□□□ -0.6
TTC39A-201ENST00000262675 RBM8AQ9Y5S9 174 aaKnown RBP11.27□□□□□ -0.6
TTC39A-201ENST00000262675 TCHHQ07283 1943 aa11.27□□□□□ -0.61
TTC39A-201ENST00000262675 ZNF500O60304 480 aaPredicted RBP11.27□□□□□ -0.61
TTC39A-201ENST00000262675 XRCC5P13010 732 aaKnown RBP11.27□□□□□ -0.61
TTC39A-201ENST00000262675 HMGCS2P54868 508 aa11.27□□□□□ -0.61
TTC39A-201ENST00000262675 PTH1RQ03431 593 aa11.27□□□□□ -0.61
TTC39A-201ENST00000262675 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.27□□□□□ -0.61
TTC39A-201ENST00000262675 ZNF512BQ96KM6 892 aaPredicted RBP11.27□□□□□ -0.61
TTC39A-201ENST00000262675 ASCC2Q9H1I8 757 aaPredicted RBP11.27□□□□□ -0.61
TTC39A-201ENST00000262675 TAOK2Q9UL54 1235 aa11.27□□□□□ -0.61
TTC39A-201ENST00000262675 TPM2P07951 284 aa11.26□□□□□ -0.61
TTC39A-201ENST00000262675 MAPK4P31152 587 aa11.26□□□□□ -0.61
TTC39A-201ENST00000262675 BACE1P56817 501 aa11.26□□□□□ -0.61
TTC39A-201ENST00000262675 NAA16Q6N069 864 aaPredicted RBP11.26□□□□□ -0.61
TTC39A-201ENST00000262675 METTL16Q86W50 562 aaKnown RBP11.26□□□□□ -0.61
TTC39A-201ENST00000262675 NAP1L5Q96NT1 182 aaPredicted RBP11.26□□□□□ -0.61
TTC39A-201ENST00000262675 FSD1Q9BTV5 496 aa11.26□□□□□ -0.61
TTC39A-201ENST00000262675 NBPF3Q9H094 633 aa11.26□□□□□ -0.61
TTC39A-201ENST00000262675 CEP290O15078 2479 aa11.26□□□□□ -0.61
TTC39A-201ENST00000262675 HLA-DOAP06340 250 aa11.26□□□□□ -0.61
TTC39A-201ENST00000262675 NMIQ13287 307 aaPredicted RBP11.26□□□□□ -0.61
TTC39A-201ENST00000262675 TTC39AQ5SRH9 613 aa11.26□□□□□ -0.61
TTC39A-201ENST00000262675 FOXD4L5Q5VV16 416 aaPredicted RBP11.26□□□□□ -0.61
TTC39A-201ENST00000262675 CRACR2BQ8N4Y2 399 aaPredicted RBP11.26□□□□□ -0.61
TTC39A-201ENST00000262675 GPRC5AQ8NFJ5 357 aa11.26□□□□□ -0.61
TTC39A-201ENST00000262675 ZNF384Q8TF68 577 aa11.26□□□□□ -0.61
TTC39A-201ENST00000262675 FOXD4L4Q8WXT5 416 aaPredicted RBP11.26□□□□□ -0.61
TTC39A-201ENST00000262675 NUDT12Q9BQG2 462 aa11.26□□□□□ -0.61
TTC39A-201ENST00000262675 GJD2Q9UKL4 321 aa11.26□□□□□ -0.61
TTC39A-201ENST00000262675 DOCK3Q8IZD9 2030 aa11.25□□□□□ -0.61
TTC39A-201ENST00000262675 TRIOBPQ9H2D6 2365 aa11.25□□□□□ -0.61
TTC39A-201ENST00000262675 SLC27A2O14975 620 aa11.25□□□□□ -0.61
TTC39A-201ENST00000262675 GJB2P29033 226 aa11.25□□□□□ -0.61
TTC39A-201ENST00000262675 MCAMP43121 646 aa11.25□□□□□ -0.61
TTC39A-201ENST00000262675 BLOC1S2Q6QNY1 142 aa11.25□□□□□ -0.61
TTC39A-201ENST00000262675 CHMP4CQ96CF2 233 aa11.25□□□□□ -0.61
TTC39A-201ENST00000262675 PAWRQ96IZ0 340 aaKnown RBP11.25□□□□□ -0.61
TTC39A-201ENST00000262675 USP17L10C9JJH3 530 aa11.24□□□□□ -0.61
TTC39A-201ENST00000262675 OFD1O75665 1012 aa11.24□□□□□ -0.61
TTC39A-201ENST00000262675 CCAR1Q8IX12 1150 aaKnown RBP11.24□□□□□ -0.61
TTC39A-201ENST00000262675 CCDC8Q9H0W5 538 aaPredicted RBP11.24□□□□□ -0.61
TTC39A-201ENST00000262675 ZKSCAN5Q9Y2L8 839 aa11.24□□□□□ -0.61
TTC39A-201ENST00000262675 ELP1O95163 1332 aa11.24□□□□□ -0.61
TTC39A-201ENST00000262675 SH3RF3Q8TEJ3 882 aaPredicted RBP11.24□□□□□ -0.61
TTC39A-201ENST00000262675 C11orf49Q9H6J7 331 aa11.24□□□□□ -0.61
TTC39A-201ENST00000262675 OGDHLQ9ULD0 1010 aa11.24□□□□□ -0.61
TTC39A-201ENST00000262675 MTMR6Q9Y217 621 aa11.24□□□□□ -0.61
TTC39A-201ENST00000262675 U3KPZ7 1027 aaPredicted RBP11.24□□□□□ -0.61
TTC39A-201ENST00000262675 CDK5RAP2Q96SN8 1893 aa11.24□□□□□ -0.61
TTC39A-201ENST00000262675 PLXNB2O15031 1838 aa11.23□□□□□ -0.61
TTC39A-201ENST00000262675 ALPK3Q96L96 1907 aa11.23□□□□□ -0.61
TTC39A-201ENST00000262675 RPS6KB1P23443 525 aa11.23□□□□□ -0.61
TTC39A-201ENST00000262675 CCNA1P78396 465 aa11.23□□□□□ -0.61
TTC39A-201ENST00000262675 MTMR2Q13614 643 aa11.23□□□□□ -0.61
TTC39A-201ENST00000262675 ADCK5Q3MIX3 580 aa11.23□□□□□ -0.61
TTC39A-201ENST00000262675 TNNI3KQ59H18 835 aa11.23□□□□□ -0.61
TTC39A-201ENST00000262675 MAP3K21Q5TCX8 1036 aa11.23□□□□□ -0.61
TTC39A-201ENST00000262675 USP17L2Q6R6M4 530 aa11.23□□□□□ -0.61
TTC39A-201ENST00000262675 CCDC83Q8IWF9 413 aa11.23□□□□□ -0.61
TTC39A-201ENST00000262675 BOLA2Q9H3K6 86 aa11.23□□□□□ -0.61
TTC39A-201ENST00000262675 FPGT-TNNI3KV9GXZ4 949 aa11.23□□□□□ -0.61
TTC39A-201ENST00000262675 SIPA1L1O43166 1804 aa11.23□□□□□ -0.61
TTC39A-201ENST00000262675 DDX60LQ5H9U9 1706 aaKnown RBP11.23□□□□□ -0.61
TTC39A-201ENST00000262675 FAM196BA6NMK8 535 aa11.23□□□□□ -0.61
TTC39A-201ENST00000262675 HMGB1P09429 215 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms