RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 PHF20Q9BVI0 1012 aa15.59■□□□□ 0.09
VMP1-201ENST00000262291 USP40Q9NVE5 1235 aa15.59■□□□□ 0.09
VMP1-201ENST00000262291 H0YIN7 160 aa15.59■□□□□ 0.09
VMP1-201ENST00000262291 KRT2P35908 639 aa15.59■□□□□ 0.09
VMP1-201ENST00000262291 ZNF174Q15697 407 aa15.59■□□□□ 0.09
VMP1-201ENST00000262291 FLAD1Q8NFF5 587 aa15.59■□□□□ 0.09
VMP1-201ENST00000262291 CCDC39Q9UFE4 941 aa15.59■□□□□ 0.09
VMP1-201ENST00000262291 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.59■□□□□ 0.09
VMP1-201ENST00000262291 ADAMTSL1Q8N6G6 1762 aa15.59■□□□□ 0.09
VMP1-201ENST00000262291 ZBTB22O15209 634 aa15.59■□□□□ 0.09
VMP1-201ENST00000262291 NLRP5P59047 1200 aa15.59■□□□□ 0.09
VMP1-201ENST00000262291 STX1AQ16623 288 aa15.59■□□□□ 0.09
VMP1-201ENST00000262291 DPCR1Q3MIW9 517 aa15.59■□□□□ 0.09
VMP1-201ENST00000262291 C17orf53Q8N3J3 647 aaPredicted RBP15.59■□□□□ 0.09
VMP1-201ENST00000262291 LTBP1Q14766 1721 aa15.58■□□□□ 0.09
VMP1-201ENST00000262291 GAKO14976 1311 aa15.58■□□□□ 0.09
VMP1-201ENST00000262291 FAM196BA6NMK8 535 aa15.58■□□□□ 0.08
VMP1-201ENST00000262291 CTAGE5O15320 804 aa15.58■□□□□ 0.08
VMP1-201ENST00000262291 PNOCQ13519 176 aa15.58■□□□□ 0.08
VMP1-201ENST00000262291 NPY5RQ15761 445 aa15.58■□□□□ 0.08
VMP1-201ENST00000262291 SLC15A2Q16348 729 aa15.58■□□□□ 0.08
VMP1-201ENST00000262291 ZFPM1Q8IX07 1006 aa15.58■□□□□ 0.08
VMP1-201ENST00000262291 VAT1LQ9HCJ6 419 aa15.58■□□□□ 0.08
VMP1-201ENST00000262291 CDK5RAP2Q96SN8 1893 aa15.58■□□□□ 0.08
VMP1-201ENST00000262291 SCG2P13521 617 aa15.58■□□□□ 0.08
VMP1-201ENST00000262291 XBP1P17861 261 aa15.58■□□□□ 0.08
VMP1-201ENST00000262291 RBM5P52756 815 aaKnown RBP eCLIP15.58■□□□□ 0.08
VMP1-201ENST00000262291 TCP10Q12799 353 aa15.58■□□□□ 0.08
VMP1-201ENST00000262291 NFIAQ12857 509 aa15.58■□□□□ 0.08
VMP1-201ENST00000262291 LONRF3Q496Y0 759 aa15.58■□□□□ 0.08
VMP1-201ENST00000262291 USP17L2Q6R6M4 530 aa15.58■□□□□ 0.08
VMP1-201ENST00000262291 TMC4Q7Z404 712 aa15.58■□□□□ 0.08
VMP1-201ENST00000262291 KRI1Q8N9T8 703 aaKnown RBP15.58■□□□□ 0.08
VMP1-201ENST00000262291 CEP95Q96GE4 821 aa15.58■□□□□ 0.08
VMP1-201ENST00000262291 PPP6R2O75170 966 aa15.57■□□□□ 0.08
VMP1-201ENST00000262291 AOC3Q16853 763 aa15.57■□□□□ 0.08
VMP1-201ENST00000262291 PIK3AP1Q6ZUJ8 805 aa15.57■□□□□ 0.08
VMP1-201ENST00000262291 C16orf86Q6ZW13 317 aa15.57■□□□□ 0.08
VMP1-201ENST00000262291 GRAMD1CQ8IYS0 662 aa15.57■□□□□ 0.08
VMP1-201ENST00000262291 AOPEPQ8N6M6 819 aa15.57■□□□□ 0.08
VMP1-201ENST00000262291 JMYQ8N9B5 988 aa15.57■□□□□ 0.08
VMP1-201ENST00000262291 TRIM5Q9C035 493 aa15.57■□□□□ 0.08
VMP1-201ENST00000262291 KIAA1468Q9P260 1216 aa15.57■□□□□ 0.08
VMP1-201ENST00000262291 MAD2L2Q9UI95 211 aa15.57■□□□□ 0.08
VMP1-201ENST00000262291 SNED1Q8TER0 1413 aa15.57■□□□□ 0.08
VMP1-201ENST00000262291 PLCG2P16885 1265 aa15.57■□□□□ 0.08
VMP1-201ENST00000262291 PPP2R5BQ15173 497 aa15.57■□□□□ 0.08
VMP1-201ENST00000262291 RESP18Q5W5W9 173 aa15.57■□□□□ 0.08
VMP1-201ENST00000262291 TYW1BQ6NUM6 668 aa15.57■□□□□ 0.08
VMP1-201ENST00000262291 DGKHQ86XP1 1220 aa15.57■□□□□ 0.08
VMP1-201ENST00000262291 HOMER1Q86YM7 354 aa15.57■□□□□ 0.08
VMP1-201ENST00000262291 SLF2Q8IX21 1173 aa15.57■□□□□ 0.08
VMP1-201ENST00000262291 FBXO2Q9UK22 296 aaPredicted RBP15.57■□□□□ 0.08
VMP1-201ENST00000262291 LRRC37AA6NMS7 1700 aa15.57■□□□□ 0.08
VMP1-201ENST00000262291 DLEC1Q9Y238 1755 aa15.56■□□□□ 0.08
VMP1-201ENST00000262291 SLX4Q8IY92 1834 aa15.56■□□□□ 0.08
VMP1-201ENST00000262291 CYTH3O43739 400 aa15.56■□□□□ 0.08
VMP1-201ENST00000262291 IQCB1Q15051 598 aa15.56■□□□□ 0.08
VMP1-201ENST00000262291 SHROOM1Q2M3G4 852 aaPredicted RBP15.56■□□□□ 0.08
VMP1-201ENST00000262291 RILPL1Q5EBL4 403 aa15.56■□□□□ 0.08
VMP1-201ENST00000262291 CDC42EP5Q6NZY7 148 aa15.56■□□□□ 0.08
VMP1-201ENST00000262291 FAM163AQ96GL9 167 aaPredicted RBP15.56■□□□□ 0.08
VMP1-201ENST00000262291 KCNH3Q9ULD8 1083 aa15.56■□□□□ 0.08
VMP1-201ENST00000262291 ROBO3Q96MS0 1386 aa15.56■□□□□ 0.08
VMP1-201ENST00000262291 CUTAO60888 179 aa15.56■□□□□ 0.08
VMP1-201ENST00000262291 AKR1B1P15121 316 aa15.56■□□□□ 0.08
VMP1-201ENST00000262291 KIF5BP33176 963 aa15.56■□□□□ 0.08
VMP1-201ENST00000262291 MAPK8IP2Q13387 824 aaPredicted RBP15.56■□□□□ 0.08
VMP1-201ENST00000262291 HEATR3Q7Z4Q2 680 aa15.56■□□□□ 0.08
VMP1-201ENST00000262291 DRC7Q8IY82 874 aa15.56■□□□□ 0.08
VMP1-201ENST00000262291 LRRC47Q8N1G4 583 aaKnown RBP15.56■□□□□ 0.08
VMP1-201ENST00000262291 UBA5Q9GZZ9 404 aa15.56■□□□□ 0.08
VMP1-201ENST00000262291 CSRNP2Q9H175 543 aa15.56■□□□□ 0.08
VMP1-201ENST00000262291 STK32BQ9NY57 414 aa15.56■□□□□ 0.08
VMP1-201ENST00000262291 NRBP1Q9UHY1 535 aa15.56■□□□□ 0.08
VMP1-201ENST00000262291 FRMPD2Q68DX3 1309 aaPredicted RBP15.56■□□□□ 0.08
VMP1-201ENST00000262291 DDX60LQ5H9U9 1706 aaKnown RBP15.56■□□□□ 0.08
VMP1-201ENST00000262291 MYH1P12882 1939 aa15.55■□□□□ 0.08
VMP1-201ENST00000262291 BECN2A8MW95 431 aa15.55■□□□□ 0.08
VMP1-201ENST00000262291 C21orf2O43822 256 aa15.55■□□□□ 0.08
VMP1-201ENST00000262291 ATP2B2Q01814 1243 aa15.55■□□□□ 0.08
VMP1-201ENST00000262291 MYRIPQ8NFW9 859 aa15.55■□□□□ 0.08
VMP1-201ENST00000262291 CAMKK2Q96RR4 588 aa15.55■□□□□ 0.08
VMP1-201ENST00000262291 HPSEQ9Y251 543 aa15.55■□□□□ 0.08
VMP1-201ENST00000262291 UTRNP46939 3433 aa15.55■□□□□ 0.08
VMP1-201ENST00000262291 TRIM75PA6NK02 468 aa15.55■□□□□ 0.08
VMP1-201ENST00000262291 GOLGA6L19H0YKK7 550 aa15.55■□□□□ 0.08
VMP1-201ENST00000262291 POLR2DO15514 142 aaKnown RBP15.55■□□□□ 0.08
VMP1-201ENST00000262291 ECE2O60344 883 aa15.55■□□□□ 0.08
VMP1-201ENST00000262291 GRM4Q14833 912 aa15.55■□□□□ 0.08
VMP1-201ENST00000262291 ZRSR1Q15695 479 aaKnown RBP15.55■□□□□ 0.08
VMP1-201ENST00000262291 PFKFB3Q16875 520 aaPredicted RBP15.55■□□□□ 0.08
VMP1-201ENST00000262291 TMED8Q6PL24 325 aaPredicted RBP15.55■□□□□ 0.08
VMP1-201ENST00000262291 DHX40Q8IX18 779 aaKnown RBP15.55■□□□□ 0.08
VMP1-201ENST00000262291 ANO10Q9NW15 660 aa15.55■□□□□ 0.08
VMP1-201ENST00000262291 KIAA2012Q0VF49 1180 aa15.54■□□□□ 0.08
VMP1-201ENST00000262291 APOBEC3HQ6NTF7 200 aaKnown RBP15.54■□□□□ 0.08
VMP1-201ENST00000262291 EPSTI1Q96J88 318 aa15.54■□□□□ 0.08
VMP1-201ENST00000262291 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.54■□□□□ 0.08
VMP1-201ENST00000262291 NRXN2Q9P2S2 1712 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms