RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 ANKRD42Q8N9B4 389 aa11.79□□□□□ -0.52
KPNA3-201ENST00000261667 CFAP61Q8NHU2 1237 aa11.79□□□□□ -0.52
KPNA3-201ENST00000261667 PPP1R14CQ8TAE6 165 aa11.79□□□□□ -0.52
KPNA3-201ENST00000261667 ZNF653Q96CK0 615 aa11.79□□□□□ -0.52
KPNA3-201ENST00000261667 TMEM110-MUSTN1A8MSY1 372 aa11.79□□□□□ -0.52
KPNA3-201ENST00000261667 MAP3K7O43318 606 aa11.79□□□□□ -0.52
KPNA3-201ENST00000261667 IRAK1P51617 712 aa11.79□□□□□ -0.52
KPNA3-201ENST00000261667 FYB2Q5VWT5 728 aa11.79□□□□□ -0.52
KPNA3-201ENST00000261667 MFN1Q8IWA4 741 aa11.79□□□□□ -0.52
KPNA3-201ENST00000261667 TRMT2AQ8IZ69 625 aaKnown RBP11.79□□□□□ -0.52
KPNA3-201ENST00000261667 NEK1Q96PY6 1258 aa11.79□□□□□ -0.52
KPNA3-201ENST00000261667 DDX23Q9BUQ8 820 aaKnown RBP11.79□□□□□ -0.52
KPNA3-201ENST00000261667 MIS12Q9H081 205 aa11.79□□□□□ -0.52
KPNA3-201ENST00000261667 CHMP2BQ9UQN3 213 aa11.79□□□□□ -0.52
KPNA3-201ENST00000261667 EPHB4P54760 987 aa11.79□□□□□ -0.52
KPNA3-201ENST00000261667 DRP2Q13474 957 aa11.79□□□□□ -0.52
KPNA3-201ENST00000261667 THEMIS2Q5TEJ8 643 aa11.79□□□□□ -0.52
KPNA3-201ENST00000261667 CYB5D1Q6P9G0 228 aa11.79□□□□□ -0.52
KPNA3-201ENST00000261667 TMEM154Q6P9G4 183 aa11.79□□□□□ -0.52
KPNA3-201ENST00000261667 NLRP14Q86W24 1093 aa11.79□□□□□ -0.52
KPNA3-201ENST00000261667 THUMPD2Q9BTF0 503 aaKnown RBP11.79□□□□□ -0.52
KPNA3-201ENST00000261667 ZNF521Q96K83 1311 aa11.79□□□□□ -0.52
KPNA3-201ENST00000261667 ENC1O14682 589 aa11.78□□□□□ -0.52
KPNA3-201ENST00000261667 N4BP1O75113 896 aaKnown RBP11.78□□□□□ -0.52
KPNA3-201ENST00000261667 USP5P45974 858 aa11.78□□□□□ -0.52
KPNA3-201ENST00000261667 CUL4BQ13620 913 aa11.78□□□□□ -0.52
KPNA3-201ENST00000261667 FAM81AQ8TBF8 368 aa11.78□□□□□ -0.52
KPNA3-201ENST00000261667 ZHX3Q9H4I2 956 aa11.78□□□□□ -0.52
KPNA3-201ENST00000261667 EIF3HO15372 352 aaKnown RBP eCLIP11.78□□□□□ -0.52
KPNA3-201ENST00000261667 DKC1O60832 514 aaKnown RBP eCLIP11.78□□□□□ -0.52
KPNA3-201ENST00000261667 SUPT3HO75486 399 aa11.78□□□□□ -0.52
KPNA3-201ENST00000261667 TMCC1O94876 653 aa11.78□□□□□ -0.52
KPNA3-201ENST00000261667 GPTP24298 496 aa11.78□□□□□ -0.52
KPNA3-201ENST00000261667 ATICP31939 592 aa11.78□□□□□ -0.52
KPNA3-201ENST00000261667 PHEXP78562 749 aa11.78□□□□□ -0.52
KPNA3-201ENST00000261667 SKOR1P84550 965 aa11.78□□□□□ -0.52
KPNA3-201ENST00000261667 CFAP221Q4G0U5 840 aa11.78□□□□□ -0.52
KPNA3-201ENST00000261667 C11orf57Q6ZUT1 292 aaPredicted RBP11.78□□□□□ -0.52
KPNA3-201ENST00000261667 MPHOSPH6Q99547 160 aaKnown RBP11.78□□□□□ -0.52
KPNA3-201ENST00000261667 LRRC2Q9BYS8 371 aa11.78□□□□□ -0.52
KPNA3-201ENST00000261667 MTUS1Q9ULD2 1270 aa11.78□□□□□ -0.52
KPNA3-201ENST00000261667 S100BP04271 92 aaPredicted RBP11.78□□□□□ -0.52
KPNA3-201ENST00000261667 ATP5DP30049 168 aa11.78□□□□□ -0.52
KPNA3-201ENST00000261667 MRPS35P82673 323 aaKnown RBP11.78□□□□□ -0.52
KPNA3-201ENST00000261667 NBPF14Q5TI25 921 aa11.78□□□□□ -0.52
KPNA3-201ENST00000261667 HS2ST1Q7LGA3 356 aa11.78□□□□□ -0.52
KPNA3-201ENST00000261667 USHBP1Q8N6Y0 703 aa11.78□□□□□ -0.52
KPNA3-201ENST00000261667 TRPC6Q9Y210 931 aa11.78□□□□□ -0.52
KPNA3-201ENST00000261667 PRC1O43663 620 aa11.78□□□□□ -0.52
KPNA3-201ENST00000261667 KRT18P05783 430 aaKnown RBP11.78□□□□□ -0.52
KPNA3-201ENST00000261667 STX2P32856 288 aa11.78□□□□□ -0.52
KPNA3-201ENST00000261667 RAD23BP54727 409 aa11.78□□□□□ -0.52
KPNA3-201ENST00000261667 VPS16Q9H269 839 aa11.78□□□□□ -0.52
KPNA3-201ENST00000261667 UNC45AQ9H3U1 944 aa11.78□□□□□ -0.52
KPNA3-201ENST00000261667 INTS9Q9NV88 658 aaKnown RBP11.78□□□□□ -0.52
KPNA3-201ENST00000261667 FANCLQ9NW38 375 aa11.78□□□□□ -0.52
KPNA3-201ENST00000261667 KBTBD12Q3ZCT8 623 aa11.77□□□□□ -0.52
KPNA3-201ENST00000261667 ALS2CLQ60I27 953 aa11.77□□□□□ -0.52
KPNA3-201ENST00000261667 RRP36Q96EU6 259 aaKnown RBP11.77□□□□□ -0.52
KPNA3-201ENST00000261667 DCTPP1Q9H773 170 aa11.77□□□□□ -0.52
KPNA3-201ENST00000261667 DLGAP2Q9P1A6 1054 aa11.77□□□□□ -0.52
KPNA3-201ENST00000261667 LZTS1Q9Y250 596 aa11.77□□□□□ -0.52
KPNA3-201ENST00000261667 CHMLP26374 656 aa11.77□□□□□ -0.53
KPNA3-201ENST00000261667 GJA8P48165 433 aa11.77□□□□□ -0.53
KPNA3-201ENST00000261667 SERPINB4P48594 390 aa11.77□□□□□ -0.53
KPNA3-201ENST00000261667 BICDL1Q6ZP65 573 aa11.77□□□□□ -0.53
KPNA3-201ENST00000261667 WASF1Q92558 559 aa11.77□□□□□ -0.53
KPNA3-201ENST00000261667 TRAIPQ9BWF2 469 aa11.77□□□□□ -0.53
KPNA3-201ENST00000261667 ATP6V0A4Q9HBG4 840 aa11.77□□□□□ -0.53
KPNA3-201ENST00000261667 CABP1Q9NZU7 370 aa11.77□□□□□ -0.53
KPNA3-201ENST00000261667 BZW2Q9Y6E2 419 aaKnown RBP11.77□□□□□ -0.53
KPNA3-201ENST00000261667 A0A087WWV3 80 aa11.77□□□□□ -0.53
KPNA3-201ENST00000261667 CCNHP51946 323 aaPredicted RBP11.77□□□□□ -0.53
KPNA3-201ENST00000261667 SMTNP53814 917 aa11.77□□□□□ -0.53
KPNA3-201ENST00000261667 SNX1Q13596 522 aa11.77□□□□□ -0.53
KPNA3-201ENST00000261667 ANKRD20A3Q5VUR7 823 aa11.77□□□□□ -0.53
KPNA3-201ENST00000261667 NDEL1Q9GZM8 345 aa11.77□□□□□ -0.53
KPNA3-201ENST00000261667 PLCB1Q9NQ66 1216 aa11.77□□□□□ -0.53
KPNA3-201ENST00000261667 ZFATQ9P243 1243 aa11.77□□□□□ -0.53
KPNA3-201ENST00000261667 WWC3Q9ULE0 1092 aa11.77□□□□□ -0.53
KPNA3-201ENST00000261667 RBM8AQ9Y5S9 174 aaKnown RBP11.77□□□□□ -0.53
KPNA3-201ENST00000261667 PTPRUQ92729 1446 aa11.76□□□□□ -0.53
KPNA3-201ENST00000261667 SBNO1A3KN83 1393 aa11.76□□□□□ -0.53
KPNA3-201ENST00000261667 GOLGA8BA8MQT2 603 aa11.76□□□□□ -0.53
KPNA3-201ENST00000261667 PHBP35232 272 aa11.76□□□□□ -0.53
KPNA3-201ENST00000261667 CCDC152Q4G0S7 254 aa11.76□□□□□ -0.53
KPNA3-201ENST00000261667 CROCCP2Q86T23 111 aa11.76□□□□□ -0.53
KPNA3-201ENST00000261667 TEX9Q8N6V9 391 aa11.76□□□□□ -0.53
KPNA3-201ENST00000261667 C3orf20Q8ND61 904 aa11.76□□□□□ -0.53
KPNA3-201ENST00000261667 OTUD7AQ8TE49 926 aaPredicted RBP11.76□□□□□ -0.53
KPNA3-201ENST00000261667 CUL5Q93034 780 aa11.76□□□□□ -0.53
KPNA3-201ENST00000261667 ZKSCAN4Q969J2 545 aaPredicted RBP11.76□□□□□ -0.53
KPNA3-201ENST00000261667 BOLA2Q9H3K6 86 aa11.76□□□□□ -0.53
KPNA3-201ENST00000261667 KIAA1468Q9P260 1216 aa11.76□□□□□ -0.53
KPNA3-201ENST00000261667 MTMR6Q9Y217 621 aa11.76□□□□□ -0.53
KPNA3-201ENST00000261667 U3KPZ7 1027 aaPredicted RBP11.76□□□□□ -0.53
KPNA3-201ENST00000261667 DNAJC6O75061 913 aa11.76□□□□□ -0.53
KPNA3-201ENST00000261667 GUCY2DQ02846 1103 aa11.76□□□□□ -0.53
KPNA3-201ENST00000261667 NCAPH2Q6IBW4 605 aa11.76□□□□□ -0.53
KPNA3-201ENST00000261667 MMRN2Q9H8L6 949 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms