RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 OTUD5Q96G74 571 aa18.5■□□□□ 0.55
CCDC90B-201ENST00000260054 AFG3L2Q9Y4W6 797 aa18.5■□□□□ 0.55
CCDC90B-201ENST00000260054 SLC12A7Q9Y666 1083 aa18.5■□□□□ 0.55
CCDC90B-201ENST00000260054 TRIM75PA6NK02 468 aa18.5■□□□□ 0.55
CCDC90B-201ENST00000260054 RXRAP19793 462 aa18.5■□□□□ 0.55
CCDC90B-201ENST00000260054 TROAPQ12815 778 aa18.5■□□□□ 0.55
CCDC90B-201ENST00000260054 CATIPQ7Z7H3 387 aa18.5■□□□□ 0.55
CCDC90B-201ENST00000260054 SNX21Q969T3 373 aa18.5■□□□□ 0.55
CCDC90B-201ENST00000260054 OPTNQ96CV9 577 aa18.5■□□□□ 0.55
CCDC90B-201ENST00000260054 SYNPO2Q9UMS6 1093 aa18.5■□□□□ 0.55
CCDC90B-201ENST00000260054 LIMCH1Q9UPQ0 1083 aa18.5■□□□□ 0.55
CCDC90B-201ENST00000260054 TLL2Q9Y6L7 1015 aa18.5■□□□□ 0.55
CCDC90B-201ENST00000260054 USP17L10C9JJH3 530 aa18.49■□□□□ 0.55
CCDC90B-201ENST00000260054 IRF6O14896 467 aa18.49■□□□□ 0.55
CCDC90B-201ENST00000260054 PDIA3P30101 505 aaKnown RBP18.49■□□□□ 0.55
CCDC90B-201ENST00000260054 GJA5P36382 358 aa18.49■□□□□ 0.55
CCDC90B-201ENST00000260054 MTMR2Q13614 643 aa18.49■□□□□ 0.55
CCDC90B-201ENST00000260054 ZYXQ15942 572 aaKnown RBP18.49■□□□□ 0.55
CCDC90B-201ENST00000260054 ME3Q16798 604 aa18.49■□□□□ 0.55
CCDC90B-201ENST00000260054 MICU3Q86XE3 530 aa18.49■□□□□ 0.55
CCDC90B-201ENST00000260054 CHMP4CQ96CF2 233 aa18.49■□□□□ 0.55
CCDC90B-201ENST00000260054 FEZ1Q99689 392 aa18.49■□□□□ 0.55
CCDC90B-201ENST00000260054 TBC1D2Q9BYX2 928 aa18.49■□□□□ 0.55
CCDC90B-201ENST00000260054 KIAA1683Q9H0B3 1180 aa18.49■□□□□ 0.55
CCDC90B-201ENST00000260054 SH2D4AQ9H788 454 aa18.49■□□□□ 0.55
CCDC90B-201ENST00000260054 NAP1L2Q9ULW6 460 aaPredicted RBP18.49■□□□□ 0.55
CCDC90B-201ENST00000260054 HPS5Q9UPZ3 1129 aa18.49■□□□□ 0.55
CCDC90B-201ENST00000260054 MTMR7Q9Y216 660 aa18.49■□□□□ 0.55
CCDC90B-201ENST00000260054 GOLGA8BA8MQT2 603 aa18.48■□□□□ 0.55
CCDC90B-201ENST00000260054 F5H6K3 240 aa18.48■□□□□ 0.55
CCDC90B-201ENST00000260054 DDAH1O94760 285 aa18.48■□□□□ 0.55
CCDC90B-201ENST00000260054 MCM2P49736 904 aa18.48■□□□□ 0.55
CCDC90B-201ENST00000260054 KLRC3Q07444 240 aa18.48■□□□□ 0.55
CCDC90B-201ENST00000260054 DGKZQ13574 1117 aa18.48■□□□□ 0.55
CCDC90B-201ENST00000260054 KIAA1755Q5JYT7 1200 aa18.48■□□□□ 0.55
CCDC90B-201ENST00000260054 GMCL1P1Q8NEA9 526 aa18.48■□□□□ 0.55
CCDC90B-201ENST00000260054 NUP133Q8WUM0 1156 aa18.48■□□□□ 0.55
CCDC90B-201ENST00000260054 ZNF274Q96GC6 653 aaPredicted RBP18.48■□□□□ 0.55
CCDC90B-201ENST00000260054 ZBTB43O43298 467 aa18.47■□□□□ 0.55
CCDC90B-201ENST00000260054 RAD21O60216 631 aa18.47■□□□□ 0.55
CCDC90B-201ENST00000260054 PDHBP11177 359 aa18.47■□□□□ 0.55
CCDC90B-201ENST00000260054 BACE1P56817 501 aa18.47■□□□□ 0.55
CCDC90B-201ENST00000260054 STK3Q13188 491 aa18.47■□□□□ 0.55
CCDC90B-201ENST00000260054 PPIL2Q13356 520 aa18.47■□□□□ 0.55
CCDC90B-201ENST00000260054 SYNE3Q6ZMZ3 975 aa18.47■□□□□ 0.55
CCDC90B-201ENST00000260054 CCDC144CPQ8IYA2 1237 aa18.47■□□□□ 0.55
CCDC90B-201ENST00000260054 VCPKMTQ9H867 229 aa18.47■□□□□ 0.55
CCDC90B-201ENST00000260054 NDUFB10O96000 172 aa18.47■□□□□ 0.55
CCDC90B-201ENST00000260054 SNHG28P0DPA3 235 aa18.47■□□□□ 0.55
CCDC90B-201ENST00000260054 SPICE1Q8N0Z3 855 aa18.47■□□□□ 0.55
CCDC90B-201ENST00000260054 WNK4Q96J92 1243 aa18.47■□□□□ 0.55
CCDC90B-201ENST00000260054 TMX3Q96JJ7 454 aa18.47■□□□□ 0.55
CCDC90B-201ENST00000260054 GOPCQ9HD26 462 aa18.47■□□□□ 0.55
CCDC90B-201ENST00000260054 ABT1Q9ULW3 272 aaKnown RBP18.47■□□□□ 0.55
CCDC90B-201ENST00000260054 KCNH4Q9UQ05 1017 aa18.47■□□□□ 0.55
CCDC90B-201ENST00000260054 APLP1P51693 650 aa18.46■□□□□ 0.55
CCDC90B-201ENST00000260054 RCAN1P53805 252 aa18.46■□□□□ 0.55
CCDC90B-201ENST00000260054 HMGCS2P54868 508 aa18.46■□□□□ 0.55
CCDC90B-201ENST00000260054 ST3GAL1Q11201 340 aa18.46■□□□□ 0.55
CCDC90B-201ENST00000260054 SLFN13Q68D06 897 aa18.46■□□□□ 0.55
CCDC90B-201ENST00000260054 EMILIN3Q9NT22 766 aa18.46■□□□□ 0.55
CCDC90B-201ENST00000260054 GOLGA8AA7E2F4 631 aa18.45■□□□□ 0.54
CCDC90B-201ENST00000260054 C19orf81C9J6K1 198 aa18.45■□□□□ 0.54
CCDC90B-201ENST00000260054 PFKFB2O60825 505 aa18.45■□□□□ 0.54
CCDC90B-201ENST00000260054 CALM1P0DP23 149 aa18.45■□□□□ 0.54
CCDC90B-201ENST00000260054 CALM2P0DP24 149 aa18.45■□□□□ 0.54
CCDC90B-201ENST00000260054 CALM3P0DP25 149 aa18.45■□□□□ 0.54
CCDC90B-201ENST00000260054 METAP2P50579 478 aaKnown RBP eCLIP18.45■□□□□ 0.54
CCDC90B-201ENST00000260054 ZNF157P51786 506 aaPredicted RBP18.45■□□□□ 0.54
CCDC90B-201ENST00000260054 USP14P54578 494 aa18.45■□□□□ 0.54
CCDC90B-201ENST00000260054 CCT2P78371 535 aaKnown RBP18.45■□□□□ 0.54
CCDC90B-201ENST00000260054 GRM4Q14833 912 aa18.45■□□□□ 0.54
CCDC90B-201ENST00000260054 RGMBQ6NW40 437 aa18.45■□□□□ 0.54
CCDC90B-201ENST00000260054 USP17L2Q6R6M4 530 aa18.45■□□□□ 0.54
CCDC90B-201ENST00000260054 HSCBQ8IWL3 235 aa18.45■□□□□ 0.54
CCDC90B-201ENST00000260054 NECAB1Q8N987 351 aa18.45■□□□□ 0.54
CCDC90B-201ENST00000260054 FANCBQ8NB91 859 aa18.45■□□□□ 0.54
CCDC90B-201ENST00000260054 GMCL1Q96IK5 515 aa18.45■□□□□ 0.54
CCDC90B-201ENST00000260054 ZSCAN31Q96LW9 406 aaPredicted RBP18.45■□□□□ 0.54
CCDC90B-201ENST00000260054 NUP88Q99567 741 aaPredicted RBP18.45■□□□□ 0.54
CCDC90B-201ENST00000260054 SLKQ9H2G2 1235 aaPredicted RBP18.45■□□□□ 0.54
CCDC90B-201ENST00000260054 NCOA5Q9HCD5 579 aaKnown RBP18.45■□□□□ 0.54
CCDC90B-201ENST00000260054 K7ELQ4 463 aaPredicted RBP18.44■□□□□ 0.54
CCDC90B-201ENST00000260054 CXCL11O14625 94 aa18.44■□□□□ 0.54
CCDC90B-201ENST00000260054 GOLGA8HP0CJ92 632 aa18.44■□□□□ 0.54
CCDC90B-201ENST00000260054 CDC27P30260 824 aa18.44■□□□□ 0.54
CCDC90B-201ENST00000260054 SCRN1Q12765 414 aa18.44■□□□□ 0.54
CCDC90B-201ENST00000260054 MKRN3Q13064 507 aaKnown RBP18.44■□□□□ 0.54
CCDC90B-201ENST00000260054 SH3D19Q5HYK7 790 aa18.44■□□□□ 0.54
CCDC90B-201ENST00000260054 SPRYD7Q5W111 196 aa18.44■□□□□ 0.54
CCDC90B-201ENST00000260054 RASAL3Q86YV0 1011 aa18.44■□□□□ 0.54
CCDC90B-201ENST00000260054 C12orf42Q96LP6 360 aa18.44■□□□□ 0.54
CCDC90B-201ENST00000260054 MAP3K14Q99558 947 aa18.44■□□□□ 0.54
CCDC90B-201ENST00000260054 SH2B1Q9NRF2 756 aaPredicted RBP18.44■□□□□ 0.54
CCDC90B-201ENST00000260054 FAM217BQ9NTX9 383 aaPredicted RBP18.44■□□□□ 0.54
CCDC90B-201ENST00000260054 MAD2L2Q9UI95 211 aa18.44■□□□□ 0.54
CCDC90B-201ENST00000260054 NID2Q14112 1375 aa18.44■□□□□ 0.54
CCDC90B-201ENST00000260054 PTPRFP10586 1907 aa18.44■□□□□ 0.54
CCDC90B-201ENST00000260054 FRMPD2Q68DX3 1309 aaPredicted RBP18.44■□□□□ 0.54
CCDC90B-201ENST00000260054 A0A0G2JLL6 359 aaPredicted RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms