RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 GTF3C4Q9UKN8 822 aa8.64□□□□□ -1.03
GPNMB-201ENST00000258733 SH3GLB1Q9Y371 365 aa8.64□□□□□ -1.03
GPNMB-201ENST00000258733 ADGBQ8N7X0 1667 aa8.64□□□□□ -1.03
GPNMB-201ENST00000258733 BIN1O00499 593 aa8.63□□□□□ -1.03
GPNMB-201ENST00000258733 PFDN1O60925 122 aa8.63□□□□□ -1.03
GPNMB-201ENST00000258733 ATP4AP20648 1035 aa8.63□□□□□ -1.03
GPNMB-201ENST00000258733 PLOD1Q02809 727 aaPredicted RBP8.63□□□□□ -1.03
GPNMB-201ENST00000258733 LRMPQ12912 555 aa8.63□□□□□ -1.03
GPNMB-201ENST00000258733 USH1GQ495M9 461 aa8.63□□□□□ -1.03
GPNMB-201ENST00000258733 TAOK1Q7L7X3 1001 aa8.63□□□□□ -1.03
GPNMB-201ENST00000258733 DAAM2Q86T65 1068 aa8.63□□□□□ -1.03
GPNMB-201ENST00000258733 CABP7Q86V35 215 aa8.63□□□□□ -1.03
GPNMB-201ENST00000258733 SMC1BQ8NDV3 1235 aa8.63□□□□□ -1.03
GPNMB-201ENST00000258733 GDAP1Q8TB36 358 aa8.63□□□□□ -1.03
GPNMB-201ENST00000258733 HELQQ8TDG4 1101 aa8.63□□□□□ -1.03
GPNMB-201ENST00000258733 SLC16A10Q8TF71 515 aa8.63□□□□□ -1.03
GPNMB-201ENST00000258733 UPF3BQ9BZI7 483 aaKnown RBP8.63□□□□□ -1.03
GPNMB-201ENST00000258733 HOOK1Q9UJC3 728 aaKnown RBP8.63□□□□□ -1.03
GPNMB-201ENST00000258733 HDAC9Q9UKV0 1011 aa8.63□□□□□ -1.03
GPNMB-201ENST00000258733 A6NHS1 94 aa8.63□□□□□ -1.03
GPNMB-201ENST00000258733 VAMP4O75379 141 aa8.63□□□□□ -1.03
GPNMB-201ENST00000258733 PDHBP11177 359 aa8.63□□□□□ -1.03
GPNMB-201ENST00000258733 AMPHP49418 695 aa8.63□□□□□ -1.03
GPNMB-201ENST00000258733 APOBRQ0VD83 1088 aa8.63□□□□□ -1.03
GPNMB-201ENST00000258733 TOMM20Q15388 145 aa8.63□□□□□ -1.03
GPNMB-201ENST00000258733 LRRFIP1Q32MZ4 808 aaKnown RBP8.63□□□□□ -1.03
GPNMB-201ENST00000258733 CCDC40Q4G0X9 1142 aa8.63□□□□□ -1.03
GPNMB-201ENST00000258733 SLC2A7Q6PXP3 512 aa8.63□□□□□ -1.03
GPNMB-201ENST00000258733 CAPN12Q6ZSI9 719 aa8.63□□□□□ -1.03
GPNMB-201ENST00000258733 C3orf67Q6ZVT6 689 aa8.63□□□□□ -1.03
GPNMB-201ENST00000258733 SYT2Q8N9I0 419 aaPredicted RBP8.63□□□□□ -1.03
GPNMB-201ENST00000258733 FLCNQ8NFG4 579 aa8.63□□□□□ -1.03
GPNMB-201ENST00000258733 FNBP1Q96RU3 617 aa8.63□□□□□ -1.03
GPNMB-201ENST00000258733 EPB41L4AQ9HCS5 686 aaPredicted RBP8.63□□□□□ -1.03
GPNMB-201ENST00000258733 DISC1Q9NRI5 854 aa8.63□□□□□ -1.03
GPNMB-201ENST00000258733 WDR35Q9P2L0 1181 aa8.63□□□□□ -1.03
GPNMB-201ENST00000258733 ZNF777Q9ULD5 760 aaPredicted RBP8.63□□□□□ -1.03
GPNMB-201ENST00000258733 KIAA1257Q9ULG3 409 aa8.63□□□□□ -1.03
GPNMB-201ENST00000258733 NOSIPQ9Y314 301 aaKnown RBP8.63□□□□□ -1.03
GPNMB-201ENST00000258733 INSRP06213 1382 aa8.63□□□□□ -1.03
GPNMB-201ENST00000258733 NUTM2FA1L443 756 aa8.63□□□□□ -1.03
GPNMB-201ENST00000258733 K7ELQ4 463 aaPredicted RBP8.63□□□□□ -1.03
GPNMB-201ENST00000258733 CTCFP49711 727 aaPredicted RBP8.63□□□□□ -1.03
GPNMB-201ENST00000258733 PEX5P50542 639 aa8.63□□□□□ -1.03
GPNMB-201ENST00000258733 CYP4A11Q02928 519 aa8.63□□□□□ -1.03
GPNMB-201ENST00000258733 CCAR1Q8IX12 1150 aaKnown RBP8.63□□□□□ -1.03
GPNMB-201ENST00000258733 LRRN4CLQ8ND94 238 aa8.63□□□□□ -1.03
GPNMB-201ENST00000258733 ATAD3AQ9NVI7 634 aa8.63□□□□□ -1.03
GPNMB-201ENST00000258733 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.63□□□□□ -1.03
GPNMB-201ENST00000258733 POTEFA5A3E0 1075 aa8.62□□□□□ -1.03
GPNMB-201ENST00000258733 C19orf81C9J6K1 198 aa8.62□□□□□ -1.03
GPNMB-201ENST00000258733 KCNJ13O60928 360 aa8.62□□□□□ -1.03
GPNMB-201ENST00000258733 ZNF254O75437 659 aa8.62□□□□□ -1.03
GPNMB-201ENST00000258733 POTEIP0CG38 1075 aa8.62□□□□□ -1.03
GPNMB-201ENST00000258733 HOXC13P31276 330 aa8.62□□□□□ -1.03
GPNMB-201ENST00000258733 IGBP1P78318 339 aa8.62□□□□□ -1.03
GPNMB-201ENST00000258733 FAM228AQ86W67 206 aa8.62□□□□□ -1.03
GPNMB-201ENST00000258733 FCHSD1Q86WN1 690 aa8.62□□□□□ -1.03
GPNMB-201ENST00000258733 NSMCE1Q8WV22 266 aa8.62□□□□□ -1.03
GPNMB-201ENST00000258733 CDCA7LQ96GN5 454 aa8.62□□□□□ -1.03
GPNMB-201ENST00000258733 EIF2AQ9BY44 585 aaKnown RBP8.62□□□□□ -1.03
GPNMB-201ENST00000258733 OSBPL5Q9H0X9 879 aaPredicted RBP8.62□□□□□ -1.03
GPNMB-201ENST00000258733 GOLGA6L7A0A1B0GV03 622 aa8.62□□□□□ -1.03
GPNMB-201ENST00000258733 CARNS1A5YM72 827 aa8.62□□□□□ -1.03
GPNMB-201ENST00000258733 STXBP3O00186 592 aa8.62□□□□□ -1.03
GPNMB-201ENST00000258733 MAP2K7O14733 419 aa8.62□□□□□ -1.03
GPNMB-201ENST00000258733 CLASP2O75122 1294 aaKnown RBP8.62□□□□□ -1.03
GPNMB-201ENST00000258733 CYP2E1P05181 493 aaPredicted RBP8.62□□□□□ -1.03
GPNMB-201ENST00000258733 SKIP12755 728 aa8.62□□□□□ -1.03
GPNMB-201ENST00000258733 PRLRP16471 622 aa8.62□□□□□ -1.03
GPNMB-201ENST00000258733 GSTM4Q03013 218 aa8.62□□□□□ -1.03
GPNMB-201ENST00000258733 SAFBQ15424 915 aaKnown RBP eCLIP8.62□□□□□ -1.03
GPNMB-201ENST00000258733 PTF1AQ7RTS3 328 aa8.62□□□□□ -1.03
GPNMB-201ENST00000258733 KRT27Q7Z3Y8 459 aa8.62□□□□□ -1.03
GPNMB-201ENST00000258733 MSANTD4Q8NCY6 345 aa8.62□□□□□ -1.03
GPNMB-201ENST00000258733 FAM200AQ8TCP9 573 aa8.62□□□□□ -1.03
GPNMB-201ENST00000258733 PDE11AQ9HCR9 933 aa8.62□□□□□ -1.03
GPNMB-201ENST00000258733 KRT82Q9NSB4 513 aa8.62□□□□□ -1.03
GPNMB-201ENST00000258733 KCTD5Q9NXV2 234 aa8.62□□□□□ -1.03
GPNMB-201ENST00000258733 ERBINQ96RT1 1412 aa8.61□□□□□ -1.03
GPNMB-201ENST00000258733 ZBED4O75132 1171 aa8.61□□□□□ -1.03
GPNMB-201ENST00000258733 KRT14P02533 472 aa8.61□□□□□ -1.03
GPNMB-201ENST00000258733 UBL4AP11441 157 aa8.61□□□□□ -1.03
GPNMB-201ENST00000258733 HCLS1P14317 486 aaPredicted RBP8.61□□□□□ -1.03
GPNMB-201ENST00000258733 CDC25CP30307 473 aa8.61□□□□□ -1.03
GPNMB-201ENST00000258733 UBXN2AP68543 259 aa8.61□□□□□ -1.03
GPNMB-201ENST00000258733 BLMHQ13867 455 aa8.61□□□□□ -1.03
GPNMB-201ENST00000258733 ZNF362Q5T0B9 420 aaPredicted RBP8.61□□□□□ -1.03
GPNMB-201ENST00000258733 EXOC3L1Q86VI1 746 aa8.61□□□□□ -1.03
GPNMB-201ENST00000258733 ARHGAP18Q8N392 663 aa8.61□□□□□ -1.03
GPNMB-201ENST00000258733 CCDC155Q8N6L0 562 aa8.61□□□□□ -1.03
GPNMB-201ENST00000258733 ZNF653Q96CK0 615 aa8.61□□□□□ -1.03
GPNMB-201ENST00000258733 TMEM87BQ96K49 555 aa8.61□□□□□ -1.03
GPNMB-201ENST00000258733 OCEL1Q9H607 264 aa8.61□□□□□ -1.03
GPNMB-201ENST00000258733 DDX21Q9NR30 783 aaKnown RBP eCLIP8.61□□□□□ -1.03
GPNMB-201ENST00000258733 CNGA1P29973 690 aa8.61□□□□□ -1.03
GPNMB-201ENST00000258733 PSMC4P43686 418 aa8.61□□□□□ -1.03
GPNMB-201ENST00000258733 POLD2P49005 469 aa8.61□□□□□ -1.03
GPNMB-201ENST00000258733 PDE6CP51160 858 aa8.61□□□□□ -1.03
GPNMB-201ENST00000258733 MRPL28Q13084 256 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms