RNA–Protein interactions for RNA: ENST00000257632.9

UPK3B-201, Transcript of uroplakin 3B, humanhuman

APPRIS P5 TSL 2 BASIC

Gene UPK3B, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-201ENST00000257632 VCPKMTQ9H867 229 aa22.14■■□□□ 1.13
UPK3B-201ENST00000257632 GOPCQ9HD26 462 aa22.14■■□□□ 1.13
UPK3B-201ENST00000257632 INCENPQ9NQS7 918 aa22.14■■□□□ 1.13
UPK3B-201ENST00000257632 PLIN4Q96Q06 1357 aa22.13■■□□□ 1.13
UPK3B-201ENST00000257632 LAMA4Q16363 1823 aa22.13■■□□□ 1.13
UPK3B-201ENST00000257632 IMMTQ16891 758 aaKnown RBP22.13■■□□□ 1.13
UPK3B-201ENST00000257632 MFSD6Q6ZSS7 791 aa22.13■■□□□ 1.13
UPK3B-201ENST00000257632 CEP95Q96GE4 821 aa22.13■■□□□ 1.13
UPK3B-201ENST00000257632 P2RX7Q99572 595 aaKnown RBP22.13■■□□□ 1.13
UPK3B-201ENST00000257632 TANGO6Q9C0B7 1094 aa22.13■■□□□ 1.13
UPK3B-201ENST00000257632 RNF41Q9H4P4 317 aaPredicted RBP22.13■■□□□ 1.13
UPK3B-201ENST00000257632 NYAP2Q9P242 653 aa22.13■■□□□ 1.13
UPK3B-201ENST00000257632 MYH4Q9Y623 1939 aa22.13■■□□□ 1.13
UPK3B-201ENST00000257632 IGKV6D-41A0A0C4DH26 115 aa22.12■■□□□ 1.13
UPK3B-201ENST00000257632 ORC4O43929 436 aa22.12■■□□□ 1.13
UPK3B-201ENST00000257632 HERVK_113P62684 666 aa22.12■■□□□ 1.13
UPK3B-201ENST00000257632 AKNAD1Q5T1N1 836 aa22.12■■□□□ 1.13
UPK3B-201ENST00000257632 CATSPERGQ6ZRH7 1159 aa22.12■■□□□ 1.13
UPK3B-201ENST00000257632 SPICE1Q8N0Z3 855 aa22.12■■□□□ 1.13
UPK3B-201ENST00000257632 GTF3C2Q8WUA4 911 aaPredicted RBP22.12■■□□□ 1.13
UPK3B-201ENST00000257632 CLIP2Q9UDT6 1046 aa22.12■■□□□ 1.13
UPK3B-201ENST00000257632 ZSWIM8A7E2V4 1837 aa22.11■■□□□ 1.13
UPK3B-201ENST00000257632 SGSM2O43147 1006 aa22.11■■□□□ 1.13
UPK3B-201ENST00000257632 FMNL1O95466 1100 aaPredicted RBP22.11■■□□□ 1.13
UPK3B-201ENST00000257632 TTLL1O95922 423 aa22.11■■□□□ 1.13
UPK3B-201ENST00000257632 PCP11498 1178 aaKnown RBP22.11■■□□□ 1.13
UPK3B-201ENST00000257632 PSMC4P43686 418 aa22.11■■□□□ 1.13
UPK3B-201ENST00000257632 FAM110CQ1W6H9 321 aa22.11■■□□□ 1.13
UPK3B-201ENST00000257632 PPP4R3BQ5MIZ7 849 aa22.11■■□□□ 1.13
UPK3B-201ENST00000257632 STAG1Q8WVM7 1258 aa22.11■■□□□ 1.13
UPK3B-201ENST00000257632 ARHGAP39Q9C0H5 1083 aa22.11■■□□□ 1.13
UPK3B-201ENST00000257632 MTMR4Q9NYA4 1195 aa22.11■■□□□ 1.13
UPK3B-201ENST00000257632 TACC3Q9Y6A5 838 aa22.11■■□□□ 1.13
UPK3B-201ENST00000257632 WDR46O15213 610 aaKnown RBP22.1■■□□□ 1.13
UPK3B-201ENST00000257632 FGRP09769 529 aa22.1■■□□□ 1.13
UPK3B-201ENST00000257632 FCGRTP55899 365 aa22.1■■□□□ 1.13
UPK3B-201ENST00000257632 KIAA1755Q5JYT7 1200 aa22.1■■□□□ 1.13
UPK3B-201ENST00000257632 FBXO46Q6PJ61 603 aaPredicted RBP22.1■■□□□ 1.13
UPK3B-201ENST00000257632 KIAA1211Q6ZU35 1233 aa22.1■■□□□ 1.13
UPK3B-201ENST00000257632 TBC1D10CQ8IV04 446 aa22.1■■□□□ 1.13
UPK3B-201ENST00000257632 PAGR1Q9BTK6 254 aa22.1■■□□□ 1.13
UPK3B-201ENST00000257632 MGAMO43451 1857 aa22.09■■□□□ 1.13
UPK3B-201ENST00000257632 CAP1Q01518 475 aa22.09■■□□□ 1.13
UPK3B-201ENST00000257632 CASC1Q6TDU7 716 aa22.09■■□□□ 1.13
UPK3B-201ENST00000257632 NBPF3Q9H094 633 aa22.09■■□□□ 1.13
UPK3B-201ENST00000257632 GNRH1P01148 92 aa22.08■■□□□ 1.13
UPK3B-201ENST00000257632 HOXD10P28358 340 aa22.08■■□□□ 1.13
UPK3B-201ENST00000257632 LRRC47Q8N1G4 583 aaKnown RBP22.08■■□□□ 1.13
UPK3B-201ENST00000257632 TRIM47Q96LD4 638 aa22.08■■□□□ 1.13
UPK3B-201ENST00000257632 STX8Q9UNK0 236 aa22.08■■□□□ 1.13
UPK3B-201ENST00000257632 U3KPZ7 1027 aaPredicted RBP22.08■■□□□ 1.13
UPK3B-201ENST00000257632 F5H6K3 240 aa22.07■■□□□ 1.12
UPK3B-201ENST00000257632 FLOT1O75955 427 aa22.07■■□□□ 1.12
UPK3B-201ENST00000257632 PTH1RQ03431 593 aa22.07■■□□□ 1.12
UPK3B-201ENST00000257632 KLRC3Q07444 240 aa22.07■■□□□ 1.12
UPK3B-201ENST00000257632 COG2Q14746 738 aa22.07■■□□□ 1.12
UPK3B-201ENST00000257632 SAMD1Q6SPF0 538 aaPredicted RBP22.07■■□□□ 1.12
UPK3B-201ENST00000257632 GPRC5AQ8NFJ5 357 aa22.07■■□□□ 1.12
UPK3B-201ENST00000257632 ESR2Q92731 530 aa22.07■■□□□ 1.12
UPK3B-201ENST00000257632 ESYT1Q9BSJ8 1104 aa22.07■■□□□ 1.12
UPK3B-201ENST00000257632 HOXC10Q9NYD6 342 aa22.07■■□□□ 1.12
UPK3B-201ENST00000257632 MORF4L1Q9UBU8 362 aa22.07■■□□□ 1.12
UPK3B-201ENST00000257632 PTPN22Q9Y2R2 807 aa22.07■■□□□ 1.12
UPK3B-201ENST00000257632 NEDD4P46934 1319 aa22.06■■□□□ 1.12
UPK3B-201ENST00000257632 TNPO2O14787 897 aaKnown RBP22.06■■□□□ 1.12
UPK3B-201ENST00000257632 NMT2O60551 498 aa22.06■■□□□ 1.12
UPK3B-201ENST00000257632 CDC45O75419 566 aa22.06■■□□□ 1.12
UPK3B-201ENST00000257632 NDUFB10O96000 172 aa22.06■■□□□ 1.12
UPK3B-201ENST00000257632 CTGFP29279 349 aa22.06■■□□□ 1.12
UPK3B-201ENST00000257632 FAM83BQ5T0W9 1011 aa22.06■■□□□ 1.12
UPK3B-201ENST00000257632 CCAR1Q8IX12 1150 aaKnown RBP22.06■■□□□ 1.12
UPK3B-201ENST00000257632 MKL1Q969V6 931 aa22.06■■□□□ 1.12
UPK3B-201ENST00000257632 RBPJLQ9UBG7 517 aa22.06■■□□□ 1.12
UPK3B-201ENST00000257632 SYNPO2Q9UMS6 1093 aa22.06■■□□□ 1.12
UPK3B-201ENST00000257632 HPS5Q9UPZ3 1129 aa22.06■■□□□ 1.12
UPK3B-201ENST00000257632 TNRC18O15417 2968 aaPredicted RBP22.06■■□□□ 1.12
UPK3B-201ENST00000257632 SPDYE16A6NNV3 312 aaPredicted RBP22.05■■□□□ 1.12
UPK3B-201ENST00000257632 PRMT2P55345 433 aa22.05■■□□□ 1.12
UPK3B-201ENST00000257632 ERVK-9P63128 1117 aa22.05■■□□□ 1.12
UPK3B-201ENST00000257632 ERVK-24P63145 666 aa22.05■■□□□ 1.12
UPK3B-201ENST00000257632 TXNRD2Q9NNW7 524 aa22.05■■□□□ 1.12
UPK3B-201ENST00000257632 IL17RBQ9NRM6 502 aa22.05■■□□□ 1.12
UPK3B-201ENST00000257632 ISY1Q9ULR0 285 aaKnown RBP22.05■■□□□ 1.12
UPK3B-201ENST00000257632 RABGAP1Q9Y3P9 1069 aa22.05■■□□□ 1.12
UPK3B-201ENST00000257632 MYPNQ86TC9 1320 aa22.05■■□□□ 1.12
UPK3B-201ENST00000257632 PEX10O60683 326 aa22.04■■□□□ 1.12
UPK3B-201ENST00000257632 NT5C2P49902 561 aa22.04■■□□□ 1.12
UPK3B-201ENST00000257632 LBX2Q6XYB7 198 aa22.04■■□□□ 1.12
UPK3B-201ENST00000257632 COA7Q96BR5 231 aa22.04■■□□□ 1.12
UPK3B-201ENST00000257632 NUP88Q99567 741 aaPredicted RBP22.04■■□□□ 1.12
UPK3B-201ENST00000257632 KRT23Q9C075 422 aa22.04■■□□□ 1.12
UPK3B-201ENST00000257632 CNNM2Q9H8M5 875 aa22.04■■□□□ 1.12
UPK3B-201ENST00000257632 CWC22Q9HCG8 908 aaKnown RBP22.04■■□□□ 1.12
UPK3B-201ENST00000257632 SRRDQ9UH36 339 aa22.04■■□□□ 1.12
UPK3B-201ENST00000257632 B4E1Z4 1266 aa22.03■■□□□ 1.12
UPK3B-201ENST00000257632 SLC34A2O95436 690 aa22.03■■□□□ 1.12
UPK3B-201ENST00000257632 DSG3P32926 999 aa22.03■■□□□ 1.12
UPK3B-201ENST00000257632 CCNA1P78396 465 aa22.03■■□□□ 1.12
UPK3B-201ENST00000257632 SLFN13Q68D06 897 aa22.03■■□□□ 1.12
UPK3B-201ENST00000257632 GMCL1P1Q8NEA9 526 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms