RNA–Protein interactions for RNA: ENST00000255448.8

DCLK1-201, Transcript of doublecortin like kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK1, Length 5,703 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-201ENST00000255448 KIAA1468Q9P260 1216 aa12.13□□□□□ -0.47
DCLK1-201ENST00000255448 MAST3O60307 1309 aa12.13□□□□□ -0.47
DCLK1-201ENST00000255448 POLR2DO15514 142 aaKnown RBP12.12□□□□□ -0.47
DCLK1-201ENST00000255448 CDC25BP30305 580 aa12.12□□□□□ -0.47
DCLK1-201ENST00000255448 PUM3Q15397 648 aaKnown RBP12.12□□□□□ -0.47
DCLK1-201ENST00000255448 KLHDC4Q8TBB5 520 aa12.12□□□□□ -0.47
DCLK1-201ENST00000255448 CHL1O00533 1208 aa12.12□□□□□ -0.47
DCLK1-201ENST00000255448 RAPGEF1Q13905 1077 aa12.12□□□□□ -0.47
DCLK1-201ENST00000255448 NAP1L4Q99733 375 aaKnown RBP12.12□□□□□ -0.47
DCLK1-201ENST00000255448 OTUD7BQ6GQQ9 843 aa12.12□□□□□ -0.47
DCLK1-201ENST00000255448 ABCB6Q9NP58 842 aa12.12□□□□□ -0.47
DCLK1-201ENST00000255448 SEL1L2Q5TEA6 688 aa12.12□□□□□ -0.47
DCLK1-201ENST00000255448 PLIN2Q99541 437 aa12.12□□□□□ -0.47
DCLK1-201ENST00000255448 PLXNC1O60486 1568 aa12.12□□□□□ -0.47
DCLK1-201ENST00000255448 CYP2C19P33261 490 aa12.12□□□□□ -0.47
DCLK1-201ENST00000255448 MIGA1Q8NAN2 632 aa12.12□□□□□ -0.47
DCLK1-201ENST00000255448 KLHL29Q96CT2 875 aa12.12□□□□□ -0.47
DCLK1-201ENST00000255448 CCDC87Q9NVE4 849 aa12.12□□□□□ -0.47
DCLK1-201ENST00000255448 ECM2O94769 699 aaPredicted RBP12.11□□□□□ -0.47
DCLK1-201ENST00000255448 EEF2P13639 858 aaKnown RBP12.11□□□□□ -0.47
DCLK1-201ENST00000255448 HOMER3Q9NSC5 361 aa12.11□□□□□ -0.47
DCLK1-201ENST00000255448 AOX1Q06278 1338 aa12.11□□□□□ -0.47
DCLK1-201ENST00000255448 ERCC5P28715 1186 aaPredicted RBP12.11□□□□□ -0.47
DCLK1-201ENST00000255448 IRX1P78414 480 aaPredicted RBP12.11□□□□□ -0.47
DCLK1-201ENST00000255448 FAM133BQ5BKY9 247 aaKnown RBP12.11□□□□□ -0.47
DCLK1-201ENST00000255448 KRT79Q5XKE5 535 aa12.11□□□□□ -0.47
DCLK1-201ENST00000255448 RXRAP19793 462 aa12.11□□□□□ -0.47
DCLK1-201ENST00000255448 ITGA6P23229 1130 aa12.11□□□□□ -0.47
DCLK1-201ENST00000255448 GOLGA8FQ08AF8 430 aa12.11□□□□□ -0.47
DCLK1-201ENST00000255448 GOLGA8DPQ0D2H9 430 aa12.11□□□□□ -0.47
DCLK1-201ENST00000255448 SLFNL1Q499Z3 407 aa12.11□□□□□ -0.47
DCLK1-201ENST00000255448 YY1AP1Q9H869 796 aa12.11□□□□□ -0.47
DCLK1-201ENST00000255448 KAT6BQ8WYB5 2073 aa12.11□□□□□ -0.47
DCLK1-201ENST00000255448 KRT2P35908 639 aa12.11□□□□□ -0.47
DCLK1-201ENST00000255448 SATB1Q01826 763 aa12.11□□□□□ -0.47
DCLK1-201ENST00000255448 SLC35F6Q8N357 371 aa12.11□□□□□ -0.47
DCLK1-201ENST00000255448 APBA1Q02410 837 aa12.1□□□□□ -0.47
DCLK1-201ENST00000255448 HSP90AA5PQ58FG0 334 aa12.1□□□□□ -0.47
DCLK1-201ENST00000255448 TRMT1LQ7Z2T5 733 aaKnown RBP12.1□□□□□ -0.47
DCLK1-201ENST00000255448 FAM89AQ96GI7 184 aa12.1□□□□□ -0.47
DCLK1-201ENST00000255448 NCOA5Q9HCD5 579 aaKnown RBP12.1□□□□□ -0.47
DCLK1-201ENST00000255448 NOP53Q9NZM5 478 aaKnown RBP12.1□□□□□ -0.47
DCLK1-201ENST00000255448 USP21Q9UK80 565 aa12.1□□□□□ -0.47
DCLK1-201ENST00000255448 HIBADHP31937 336 aaKnown RBP12.1□□□□□ -0.47
DCLK1-201ENST00000255448 PSMD2Q13200 908 aa12.1□□□□□ -0.47
DCLK1-201ENST00000255448 SLC9C1Q4G0N8 1177 aa12.1□□□□□ -0.47
DCLK1-201ENST00000255448 CFAP61Q8NHU2 1237 aa12.1□□□□□ -0.47
DCLK1-201ENST00000255448 STX10O60499 249 aa12.1□□□□□ -0.47
DCLK1-201ENST00000255448 JAK2O60674 1132 aa12.1□□□□□ -0.47
DCLK1-201ENST00000255448 IFNAR2P48551 515 aa12.1□□□□□ -0.47
DCLK1-201ENST00000255448 PNOCQ13519 176 aa12.1□□□□□ -0.47
DCLK1-201ENST00000255448 RPS6KA1Q15418 735 aa12.1□□□□□ -0.47
DCLK1-201ENST00000255448 PDLIM2Q96JY6 352 aa12.1□□□□□ -0.47
DCLK1-201ENST00000255448 FERMT1Q9BQL6 677 aa12.1□□□□□ -0.47
DCLK1-201ENST00000255448 IFIH1Q9BYX4 1025 aaKnown RBP12.1□□□□□ -0.47
DCLK1-201ENST00000255448 TSKSQ9UJT2 592 aa12.1□□□□□ -0.47
DCLK1-201ENST00000255448 MTMR6Q9Y217 621 aa12.1□□□□□ -0.47
DCLK1-201ENST00000255448 RIMBP2O15034 1052 aa12.1□□□□□ -0.47
DCLK1-201ENST00000255448 UFL1O94874 794 aa12.1□□□□□ -0.47
DCLK1-201ENST00000255448 VPS41P49754 854 aa12.1□□□□□ -0.47
DCLK1-201ENST00000255448 CC2D1AQ6P1N0 951 aaPredicted RBP12.1□□□□□ -0.47
DCLK1-201ENST00000255448 CCDC51Q96ER9 411 aa12.1□□□□□ -0.47
DCLK1-201ENST00000255448 XAB2Q9HCS7 855 aaKnown RBP12.1□□□□□ -0.47
DCLK1-201ENST00000255448 MBD4O95243 580 aa12.1□□□□□ -0.47
DCLK1-201ENST00000255448 CAPRIN2Q6IMN6 1127 aaKnown RBP12.1□□□□□ -0.47
DCLK1-201ENST00000255448 GEMIN8Q9NWZ8 242 aaKnown RBP12.1□□□□□ -0.47
DCLK1-201ENST00000255448 VWA3AA6NCI4 1184 aa12.09□□□□□ -0.47
DCLK1-201ENST00000255448 ARHGAP42A6NI28 874 aa12.09□□□□□ -0.47
DCLK1-201ENST00000255448 ENC1O14682 589 aa12.09□□□□□ -0.47
DCLK1-201ENST00000255448 KRT15P19012 456 aa12.09□□□□□ -0.47
DCLK1-201ENST00000255448 NUP58Q9BVL2 599 aa12.09□□□□□ -0.47
DCLK1-201ENST00000255448 GGA1Q9UJY5 639 aa12.09□□□□□ -0.47
DCLK1-201ENST00000255448 PRDM4Q9UKN5 801 aa12.09□□□□□ -0.47
DCLK1-201ENST00000255448 SAMD9Q5K651 1589 aa12.09□□□□□ -0.47
DCLK1-201ENST00000255448 INSRP06213 1382 aa12.09□□□□□ -0.47
DCLK1-201ENST00000255448 ERVV-2B6SEH9 535 aa12.09□□□□□ -0.47
DCLK1-201ENST00000255448 SUN1O94901 812 aa12.09□□□□□ -0.47
DCLK1-201ENST00000255448 CLUL1Q15846 466 aa12.09□□□□□ -0.47
DCLK1-201ENST00000255448 FAM98CQ17RN3 349 aaKnown RBP12.09□□□□□ -0.47
DCLK1-201ENST00000255448 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.09□□□□□ -0.47
DCLK1-201ENST00000255448 TNNI3KQ59H18 835 aa12.09□□□□□ -0.47
DCLK1-201ENST00000255448 FCHSD1Q86WN1 690 aa12.09□□□□□ -0.47
DCLK1-201ENST00000255448 TRIM58Q8NG06 486 aa12.09□□□□□ -0.47
DCLK1-201ENST00000255448 HAUS1Q96CS2 278 aa12.09□□□□□ -0.47
DCLK1-201ENST00000255448 FANCLQ9NW38 375 aa12.09□□□□□ -0.47
DCLK1-201ENST00000255448 FPGT-TNNI3KV9GXZ4 949 aa12.09□□□□□ -0.47
DCLK1-201ENST00000255448 SBNO2Q9Y2G9 1366 aa12.09□□□□□ -0.47
DCLK1-201ENST00000255448 SLC27A2O14975 620 aa12.09□□□□□ -0.47
DCLK1-201ENST00000255448 PAK1Q13153 545 aa12.09□□□□□ -0.47
DCLK1-201ENST00000255448 TBC1D1Q86TI0 1168 aaPredicted RBP12.09□□□□□ -0.47
DCLK1-201ENST00000255448 KSR1Q8IVT5 923 aa12.09□□□□□ -0.47
DCLK1-201ENST00000255448 SYNCQ9H7C4 482 aa12.09□□□□□ -0.47
DCLK1-201ENST00000255448 GUCY2DQ02846 1103 aa12.09□□□□□ -0.47
DCLK1-201ENST00000255448 NNTQ13423 1086 aa12.09□□□□□ -0.47
DCLK1-201ENST00000255448 CSGALNACT2Q8N6G5 542 aa12.09□□□□□ -0.47
DCLK1-201ENST00000255448 CCDC97Q96F63 343 aaPredicted RBP12.09□□□□□ -0.47
DCLK1-201ENST00000255448 HYOU1Q9Y4L1 999 aa12.09□□□□□ -0.47
DCLK1-201ENST00000255448 POSTNQ15063 836 aa12.08□□□□□ -0.47
DCLK1-201ENST00000255448 PTPRTO14522 1441 aa12.08□□□□□ -0.48
DCLK1-201ENST00000255448 ENO4A6NNW6 628 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms