RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 CTR9Q6PD62 1173 aa13.15□□□□□ -0.3
CLUHP3-201ENST00000254109 ZFPM1Q8IX07 1006 aa13.15□□□□□ -0.3
CLUHP3-201ENST00000254109 ZNF654Q8IZM8 581 aa13.15□□□□□ -0.3
CLUHP3-201ENST00000254109 FMR1NBQ8N0W7 255 aaPredicted RBP13.15□□□□□ -0.3
CLUHP3-201ENST00000254109 ZBED3Q96IU2 234 aaPredicted RBP13.15□□□□□ -0.3
CLUHP3-201ENST00000254109 SDF4Q9BRK5 362 aa13.15□□□□□ -0.3
CLUHP3-201ENST00000254109 DNAJC25Q9H1X3 360 aa13.15□□□□□ -0.3
CLUHP3-201ENST00000254109 MCM9Q9NXL9 1143 aa13.15□□□□□ -0.3
CLUHP3-201ENST00000254109 ZNF70Q9UC06 446 aaPredicted RBP13.15□□□□□ -0.3
CLUHP3-201ENST00000254109 TAOK2Q9UL54 1235 aa13.15□□□□□ -0.3
CLUHP3-201ENST00000254109 SCAF8Q9UPN6 1271 aaKnown RBP13.15□□□□□ -0.3
CLUHP3-201ENST00000254109 MYH1P12882 1939 aa13.15□□□□□ -0.3
CLUHP3-201ENST00000254109 NAV1Q8NEY1 1877 aa13.15□□□□□ -0.31
CLUHP3-201ENST00000254109 GOLGA6L19H0YKK7 550 aa13.14□□□□□ -0.31
CLUHP3-201ENST00000254109 H7C1D1 291 aa13.14□□□□□ -0.31
CLUHP3-201ENST00000254109 SLC3A2P08195 630 aaKnown RBP13.14□□□□□ -0.31
CLUHP3-201ENST00000254109 TCP10Q12799 353 aa13.14□□□□□ -0.31
CLUHP3-201ENST00000254109 SLC39A14Q15043 492 aa13.14□□□□□ -0.31
CLUHP3-201ENST00000254109 KIF4BQ2VIQ3 1234 aa13.14□□□□□ -0.31
CLUHP3-201ENST00000254109 IQCA1Q86XH1 822 aa13.14□□□□□ -0.31
CLUHP3-201ENST00000254109 CERS3Q8IU89 383 aa13.14□□□□□ -0.31
CLUHP3-201ENST00000254109 FANCBQ8NB91 859 aa13.14□□□□□ -0.31
CLUHP3-201ENST00000254109 MTMR14Q8NCE2 650 aa13.14□□□□□ -0.31
CLUHP3-201ENST00000254109 TRPM4Q8TD43 1214 aa13.14□□□□□ -0.31
CLUHP3-201ENST00000254109 NUP133Q8WUM0 1156 aa13.14□□□□□ -0.31
CLUHP3-201ENST00000254109 ANO10Q9NW15 660 aa13.14□□□□□ -0.31
CLUHP3-201ENST00000254109 TNKSO95271 1327 aa13.14□□□□□ -0.31
CLUHP3-201ENST00000254109 A0A1B0GVL5 298 aa13.13□□□□□ -0.31
CLUHP3-201ENST00000254109 GLTPD2A6NH11 291 aa13.13□□□□□ -0.31
CLUHP3-201ENST00000254109 TCP10L2B9ZVM9 353 aa13.13□□□□□ -0.31
CLUHP3-201ENST00000254109 OFD1O75665 1012 aa13.13□□□□□ -0.31
CLUHP3-201ENST00000254109 DEXIO95424 95 aa13.13□□□□□ -0.31
CLUHP3-201ENST00000254109 U2AF2P26368 475 aaKnown RBP eCLIP13.13□□□□□ -0.31
CLUHP3-201ENST00000254109 NDUFA8P51970 172 aa13.13□□□□□ -0.31
CLUHP3-201ENST00000254109 ZRSR1Q15695 479 aaKnown RBP13.13□□□□□ -0.31
CLUHP3-201ENST00000254109 ZSCAN10Q96SZ4 725 aaPredicted RBP13.13□□□□□ -0.31
CLUHP3-201ENST00000254109 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.13□□□□□ -0.31
CLUHP3-201ENST00000254109 NAT10Q9H0A0 1025 aaKnown RBP13.13□□□□□ -0.31
CLUHP3-201ENST00000254109 FAM198AQ9UFP1 575 aa13.13□□□□□ -0.31
CLUHP3-201ENST00000254109 DCAF8L1A6NGE4 600 aa13.13□□□□□ -0.31
CLUHP3-201ENST00000254109 PPP6R2O75170 966 aa13.13□□□□□ -0.31
CLUHP3-201ENST00000254109 CMA1P23946 247 aa13.13□□□□□ -0.31
CLUHP3-201ENST00000254109 AKAP17AQ02040 695 aaKnown RBP13.13□□□□□ -0.31
CLUHP3-201ENST00000254109 SPDYE2Q495Y8 402 aa13.13□□□□□ -0.31
CLUHP3-201ENST00000254109 CATIPQ7Z7H3 387 aa13.13□□□□□ -0.31
CLUHP3-201ENST00000254109 CRACR2BQ8N4Y2 399 aaPredicted RBP13.13□□□□□ -0.31
CLUHP3-201ENST00000254109 VEZTQ9HBM0 779 aa13.13□□□□□ -0.31
CLUHP3-201ENST00000254109 AP5Z1O43299 807 aa13.12□□□□□ -0.31
CLUHP3-201ENST00000254109 MMP1P03956 469 aa13.12□□□□□ -0.31
CLUHP3-201ENST00000254109 CALM1P0DP23 149 aa13.12□□□□□ -0.31
CLUHP3-201ENST00000254109 CALM2P0DP24 149 aa13.12□□□□□ -0.31
CLUHP3-201ENST00000254109 CALM3P0DP25 149 aa13.12□□□□□ -0.31
CLUHP3-201ENST00000254109 LMOD1P29536 600 aaPredicted RBP13.12□□□□□ -0.31
CLUHP3-201ENST00000254109 PLCD1P51178 756 aa13.12□□□□□ -0.31
CLUHP3-201ENST00000254109 HIRAP54198 1017 aaPredicted RBP13.12□□□□□ -0.31
CLUHP3-201ENST00000254109 SEC23AQ15436 765 aa13.12□□□□□ -0.31
CLUHP3-201ENST00000254109 IFIT1BQ5T764 474 aaKnown RBP13.12□□□□□ -0.31
CLUHP3-201ENST00000254109 IDI2Q9BXS1 227 aa13.12□□□□□ -0.31
CLUHP3-201ENST00000254109 LAMB1P07942 1786 aa13.12□□□□□ -0.31
CLUHP3-201ENST00000254109 DDX60LQ5H9U9 1706 aaKnown RBP13.12□□□□□ -0.31
CLUHP3-201ENST00000254109 ZC3H4Q9UPT8 1303 aaKnown RBP13.12□□□□□ -0.31
CLUHP3-201ENST00000254109 BECN2A8MW95 431 aa13.11□□□□□ -0.31
CLUHP3-201ENST00000254109 FGRP09769 529 aa13.11□□□□□ -0.31
CLUHP3-201ENST00000254109 SLURP2P0DP57 97 aa13.11□□□□□ -0.31
CLUHP3-201ENST00000254109 XBP1P17861 261 aa13.11□□□□□ -0.31
CLUHP3-201ENST00000254109 MMP14P50281 582 aa13.11□□□□□ -0.31
CLUHP3-201ENST00000254109 NBPF11Q86T75 865 aa13.11□□□□□ -0.31
CLUHP3-201ENST00000254109 TRIM5Q9C035 493 aa13.11□□□□□ -0.31
CLUHP3-201ENST00000254109 OSBPL5Q9H0X9 879 aaPredicted RBP13.11□□□□□ -0.31
CLUHP3-201ENST00000254109 RBM28Q9NW13 759 aaKnown RBP13.11□□□□□ -0.31
CLUHP3-201ENST00000254109 ARPP21Q9UBL0 812 aaPredicted RBP13.11□□□□□ -0.31
CLUHP3-201ENST00000254109 POLR2AP24928 1970 aaKnown RBP13.11□□□□□ -0.31
CLUHP3-201ENST00000254109 MYO1BO43795 1136 aa13.11□□□□□ -0.31
CLUHP3-201ENST00000254109 ZNF202O95125 648 aa13.11□□□□□ -0.31
CLUHP3-201ENST00000254109 SBK1Q52WX2 424 aa13.11□□□□□ -0.31
CLUHP3-201ENST00000254109 C12orf60Q5U649 245 aa13.11□□□□□ -0.31
CLUHP3-201ENST00000254109 SH3BP5LQ7L8J4 393 aa13.11□□□□□ -0.31
CLUHP3-201ENST00000254109 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.11□□□□□ -0.31
CLUHP3-201ENST00000254109 NOSTRINQ8IVI9 506 aa13.11□□□□□ -0.31
CLUHP3-201ENST00000254109 DRC7Q8IY82 874 aa13.11□□□□□ -0.31
CLUHP3-201ENST00000254109 CEP57L1Q8IYX8 460 aa13.11□□□□□ -0.31
CLUHP3-201ENST00000254109 DYNLL2Q96FJ2 89 aa13.11□□□□□ -0.31
CLUHP3-201ENST00000254109 L3MBTL3Q96JM7 780 aaPredicted RBP13.11□□□□□ -0.31
CLUHP3-201ENST00000254109 RNF26Q9BY78 433 aaPredicted RBP13.11□□□□□ -0.31
CLUHP3-201ENST00000254109 FOXP1Q9H334 677 aaPredicted RBP13.11□□□□□ -0.31
CLUHP3-201ENST00000254109 TMOD2Q9NZR1 351 aa13.11□□□□□ -0.31
CLUHP3-201ENST00000254109 DDTLA6NHG4 134 aaPredicted RBP13.1□□□□□ -0.31
CLUHP3-201ENST00000254109 POTECB2RU33 542 aa13.1□□□□□ -0.31
CLUHP3-201ENST00000254109 PFKFB1P16118 471 aa13.1□□□□□ -0.31
CLUHP3-201ENST00000254109 MARCKSP29966 332 aaPredicted RBP13.1□□□□□ -0.31
CLUHP3-201ENST00000254109 PDE4BQ07343 736 aa13.1□□□□□ -0.31
CLUHP3-201ENST00000254109 AXDND1Q5T1B0 1012 aaPredicted RBP13.1□□□□□ -0.31
CLUHP3-201ENST00000254109 DIS3L2Q8IYB7 885 aaKnown RBP13.1□□□□□ -0.31
CLUHP3-201ENST00000254109 CCDC82Q8N4S0 544 aa13.1□□□□□ -0.31
CLUHP3-201ENST00000254109 ENAHQ8N8S7 591 aaPredicted RBP13.1□□□□□ -0.31
CLUHP3-201ENST00000254109 SPC24Q8NBT2 197 aa13.1□□□□□ -0.31
CLUHP3-201ENST00000254109 ZNF830Q96NB3 372 aaPredicted RBP13.1□□□□□ -0.31
CLUHP3-201ENST00000254109 MAP3K14Q99558 947 aa13.1□□□□□ -0.31
CLUHP3-201ENST00000254109 TTC12Q9H892 705 aaPredicted RBP13.1□□□□□ -0.31
CLUHP3-201ENST00000254109 HACL1Q9UJ83 578 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms