RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 MICALCLQ6ZW33 695 aa17.85■□□□□ 0.45
SLC6A8-201ENST00000253122 RSRC2Q7L4I2 434 aaKnown RBP17.85■□□□□ 0.45
SLC6A8-201ENST00000253122 CAPS2Q9BXY5 557 aa17.85■□□□□ 0.45
SLC6A8-201ENST00000253122 UBE2Q2LH0YL09 131 aa17.84■□□□□ 0.45
SLC6A8-201ENST00000253122 PRDM1O75626 825 aa17.84■□□□□ 0.45
SLC6A8-201ENST00000253122 GRIN1Q05586 938 aa17.84■□□□□ 0.45
SLC6A8-201ENST00000253122 TBC1D8BQ0IIM8 1120 aa17.84■□□□□ 0.45
SLC6A8-201ENST00000253122 USP49Q70CQ1 688 aa17.84■□□□□ 0.45
SLC6A8-201ENST00000253122 EFCAB13Q8IY85 973 aa17.84■□□□□ 0.45
SLC6A8-201ENST00000253122 KCND1Q9NSA2 647 aa17.84■□□□□ 0.45
SLC6A8-201ENST00000253122 TRMT112Q9UI30 125 aaKnown RBP17.84■□□□□ 0.45
SLC6A8-201ENST00000253122 DENND2AQ9ULE3 1009 aa17.84■□□□□ 0.45
SLC6A8-201ENST00000253122 KRT2P35908 639 aa17.84■□□□□ 0.45
SLC6A8-201ENST00000253122 CCDC178Q5BJE1 867 aa17.84■□□□□ 0.45
SLC6A8-201ENST00000253122 FOXP4Q8IVH2 680 aaPredicted RBP17.84■□□□□ 0.45
SLC6A8-201ENST00000253122 ALS2CR12Q96Q35 445 aa17.84■□□□□ 0.45
SLC6A8-201ENST00000253122 CNNM2Q9H8M5 875 aa17.84■□□□□ 0.45
SLC6A8-201ENST00000253122 RGPD5Q99666 1765 aa17.84■□□□□ 0.45
SLC6A8-201ENST00000253122 GOLGA6L7A0A1B0GV03 622 aa17.84■□□□□ 0.45
SLC6A8-201ENST00000253122 KCNJ18B7U540 433 aa17.84■□□□□ 0.45
SLC6A8-201ENST00000253122 UBAP1LF5GYI3 381 aa17.84■□□□□ 0.45
SLC6A8-201ENST00000253122 MAP2K2P36507 400 aa17.84■□□□□ 0.45
SLC6A8-201ENST00000253122 KCNJ12Q14500 433 aa17.84■□□□□ 0.45
SLC6A8-201ENST00000253122 GBP6Q6ZN66 633 aa17.84■□□□□ 0.45
SLC6A8-201ENST00000253122 IQCA1Q86XH1 822 aa17.84■□□□□ 0.45
SLC6A8-201ENST00000253122 MB21D2Q8IYB1 491 aaPredicted RBP17.84■□□□□ 0.45
SLC6A8-201ENST00000253122 SYMPKQ92797 1274 aaKnown RBP17.84■□□□□ 0.45
SLC6A8-201ENST00000253122 CCDC51Q96ER9 411 aa17.84■□□□□ 0.45
SLC6A8-201ENST00000253122 RNF41Q9H4P4 317 aaPredicted RBP17.84■□□□□ 0.45
SLC6A8-201ENST00000253122 MMRN2Q9H8L6 949 aa17.84■□□□□ 0.45
SLC6A8-201ENST00000253122 KAT6BQ8WYB5 2073 aa17.84■□□□□ 0.45
SLC6A8-201ENST00000253122 XIRP1Q702N8 1843 aaKnown RBP17.83■□□□□ 0.45
SLC6A8-201ENST00000253122 A0A087WUV0 522 aaPredicted RBP17.83■□□□□ 0.45
SLC6A8-201ENST00000253122 PSMA7O14818 248 aa17.83■□□□□ 0.45
SLC6A8-201ENST00000253122 A0A0U1RQJ8 604 aa17.83■□□□□ 0.44
SLC6A8-201ENST00000253122 HPDP32754 393 aaPredicted RBP17.83■□□□□ 0.44
SLC6A8-201ENST00000253122 MORC3Q14149 939 aa17.83■□□□□ 0.44
SLC6A8-201ENST00000253122 CYB5R4Q7L1T6 521 aa17.83■□□□□ 0.44
SLC6A8-201ENST00000253122 TADA2BQ86TJ2 420 aa17.83■□□□□ 0.44
SLC6A8-201ENST00000253122 EPS15P42566 896 aa17.83■□□□□ 0.44
SLC6A8-201ENST00000253122 SF3A3Q12874 501 aaKnown RBP eCLIP17.83■□□□□ 0.448e-7■■■■■ 52.4
SLC6A8-201ENST00000253122 CFAP58Q5T655 872 aa17.83■□□□□ 0.44
SLC6A8-201ENST00000253122 RMND1Q9NWS8 449 aa17.83■□□□□ 0.44
SLC6A8-201ENST00000253122 PSD3Q9NYI0 1048 aa17.83■□□□□ 0.44
SLC6A8-201ENST00000253122 TMOD3Q9NYL9 352 aa17.83■□□□□ 0.44
SLC6A8-201ENST00000253122 COPB1P53618 953 aaKnown RBP17.82■□□□□ 0.44
SLC6A8-201ENST00000253122 ABCC6O95255 1503 aa17.82■□□□□ 0.44
SLC6A8-201ENST00000253122 COL15A1P39059 1388 aa17.82■□□□□ 0.44
SLC6A8-201ENST00000253122 GGCXP38435 758 aa17.82■□□□□ 0.44
SLC6A8-201ENST00000253122 FXR1P51114 621 aaKnown RBP eCLIP17.82■□□□□ 0.44
SLC6A8-201ENST00000253122 VAV2P52735 878 aa17.82■□□□□ 0.44
SLC6A8-201ENST00000253122 SLC20A2Q08357 652 aa17.82■□□□□ 0.44
SLC6A8-201ENST00000253122 L1RE1Q9UN81 338 aa17.82■□□□□ 0.44
SLC6A8-201ENST00000253122 HPS5Q9UPZ3 1129 aa17.82■□□□□ 0.44
SLC6A8-201ENST00000253122 HAUS4Q9H6D7 363 aa17.82■□□□□ 0.44
SLC6A8-201ENST00000253122 SENP2Q9HC62 589 aa17.82■□□□□ 0.44
SLC6A8-201ENST00000253122 TRIM10Q9UDY6 481 aa17.82■□□□□ 0.44
SLC6A8-201ENST00000253122 SH2B2O14492 632 aaPredicted RBP17.81■□□□□ 0.44
SLC6A8-201ENST00000253122 ZPR1O75312 459 aa17.81■□□□□ 0.44
SLC6A8-201ENST00000253122 TMTC2Q8N394 836 aa17.81■□□□□ 0.44
SLC6A8-201ENST00000253122 CDK5RAP3Q96JB5 506 aa17.81■□□□□ 0.44
SLC6A8-201ENST00000253122 POLD4Q9HCU8 107 aa17.81■□□□□ 0.44
SLC6A8-201ENST00000253122 PTPREP23469 700 aa17.81■□□□□ 0.44
SLC6A8-201ENST00000253122 IFIT1BQ5T764 474 aaKnown RBP17.81■□□□□ 0.44
SLC6A8-201ENST00000253122 AEBP2Q6ZN18 517 aaPredicted RBP17.81■□□□□ 0.44
SLC6A8-201ENST00000253122 PIK3AP1Q6ZUJ8 805 aa17.81■□□□□ 0.44
SLC6A8-201ENST00000253122 TBC1D10CQ8IV04 446 aa17.81■□□□□ 0.44
SLC6A8-201ENST00000253122 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.81■□□□□ 0.44
SLC6A8-201ENST00000253122 LRRC37A3O60309 1634 aa17.81■□□□□ 0.44
SLC6A8-201ENST00000253122 COL5A2P05997 1499 aaPredicted RBP17.81■□□□□ 0.44
SLC6A8-201ENST00000253122 CCDC194A0A1B0GVG4 234 aa17.81■□□□□ 0.44
SLC6A8-201ENST00000253122 CYP27A1Q02318 531 aa17.81■□□□□ 0.44
SLC6A8-201ENST00000253122 C2orf54Q08AI8 447 aa17.81■□□□□ 0.44
SLC6A8-201ENST00000253122 TRIM14Q14142 442 aa17.81■□□□□ 0.44
SLC6A8-201ENST00000253122 SCARF1Q14162 830 aa17.81■□□□□ 0.44
SLC6A8-201ENST00000253122 ANKZF1Q9H8Y5 726 aa17.81■□□□□ 0.44
SLC6A8-201ENST00000253122 ANTXR2P58335 489 aa17.8■□□□□ 0.44
SLC6A8-201ENST00000253122 KRT31Q15323 416 aa17.8■□□□□ 0.44
SLC6A8-201ENST00000253122 ANKRD13CQ8N6S4 541 aa17.8■□□□□ 0.44
SLC6A8-201ENST00000253122 TAF4BQ92750 862 aa17.8■□□□□ 0.44
SLC6A8-201ENST00000253122 ZSWIM5Q9P217 1185 aa17.8■□□□□ 0.44
SLC6A8-201ENST00000253122 NDUFA10O95299 355 aa17.8■□□□□ 0.44
SLC6A8-201ENST00000253122 BMP15O95972 392 aa17.8■□□□□ 0.44
SLC6A8-201ENST00000253122 SECISBP2LQ93073 1101 aaKnown RBP17.8■□□□□ 0.44
SLC6A8-201ENST00000253122 CCDC114Q96M63 670 aa17.8■□□□□ 0.44
SLC6A8-201ENST00000253122 CAMTA1Q9Y6Y1 1673 aa17.8■□□□□ 0.44
SLC6A8-201ENST00000253122 EXOC5O00471 708 aa17.8■□□□□ 0.44
SLC6A8-201ENST00000253122 MMP1P03956 469 aa17.8■□□□□ 0.44
SLC6A8-201ENST00000253122 SLC7A5Q01650 507 aa17.8■□□□□ 0.44
SLC6A8-201ENST00000253122 PPFIA1Q13136 1202 aa17.8■□□□□ 0.44
SLC6A8-201ENST00000253122 NR1I3Q14994 352 aa17.8■□□□□ 0.44
SLC6A8-201ENST00000253122 TTC38Q5R3I4 469 aa17.8■□□□□ 0.44
SLC6A8-201ENST00000253122 TFR2Q9UP52 801 aa17.8■□□□□ 0.44
SLC6A8-201ENST00000253122 ERVV-2B6SEH9 535 aa17.79■□□□□ 0.44
SLC6A8-201ENST00000253122 CXCR5P32302 372 aa17.79■□□□□ 0.44
SLC6A8-201ENST00000253122 GUCY1A2P33402 732 aa17.79■□□□□ 0.44
SLC6A8-201ENST00000253122 ARID5AQ03989 594 aa17.79■□□□□ 0.44
SLC6A8-201ENST00000253122 POTEDQ86YR6 584 aa17.79■□□□□ 0.44
SLC6A8-201ENST00000253122 ESR2Q92731 530 aa17.79■□□□□ 0.44
SLC6A8-201ENST00000253122 CHP1Q99653 195 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms