RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 CTAGE8P0CG41 777 aa4.71□□□□□ -1.66
UBE4A-201ENST00000252108 IBSPP21815 317 aaPredicted RBP4.71□□□□□ -1.66
UBE4A-201ENST00000252108 FANCCQ00597 558 aa4.71□□□□□ -1.66
UBE4A-201ENST00000252108 ELF2Q15723 593 aa4.71□□□□□ -1.66
UBE4A-201ENST00000252108 KIF4BQ2VIQ3 1234 aa4.71□□□□□ -1.66
UBE4A-201ENST00000252108 CTAGE6Q86UF2 777 aa4.71□□□□□ -1.66
UBE4A-201ENST00000252108 CTAGE4Q8IX94 777 aa4.71□□□□□ -1.66
UBE4A-201ENST00000252108 CCDC87Q9NVE4 849 aa4.71□□□□□ -1.66
UBE4A-201ENST00000252108 BSDC1Q9NW68 430 aaPredicted RBP4.71□□□□□ -1.66
UBE4A-201ENST00000252108 A0A0G2JMZ2 1700 aa4.71□□□□□ -1.66
UBE4A-201ENST00000252108 LRRC37A2A6NM11 1700 aa4.71□□□□□ -1.66
UBE4A-201ENST00000252108 ZNF213O14771 459 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 MCCD1P59942 119 aaPredicted RBP4.7□□□□□ -1.66
UBE4A-201ENST00000252108 HOMEZQ8IX15 550 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 MED4Q9NPJ6 270 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 STRN4Q9NRL3 753 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 CTAGE9A4FU28 777 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 CCDC151A5D8V7 595 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 ERICH4A6NGS2 130 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 GOLGA8BA8MQT2 603 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 SNAP23O00161 211 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 PFKFB1P16118 471 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 PPP2R3AQ06190 1150 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 SLC20A2Q08357 652 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 WHAMMP3Q1A5X7 153 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 PARP10Q53GL7 1025 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 ANO1Q5XXA6 986 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 SPATS2Q86XZ4 545 aaKnown RBP4.7□□□□□ -1.66
UBE4A-201ENST00000252108 REXO1L1PQ8IX06 675 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 FAM84BQ96KN1 310 aaPredicted RBP4.7□□□□□ -1.66
UBE4A-201ENST00000252108 BAG1Q99933 345 aaPredicted RBP4.7□□□□□ -1.66
UBE4A-201ENST00000252108 PSD3Q9NYI0 1048 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 DOCK5Q9H7D0 1870 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 LOC102724428A0A0B4J2F2 783 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 HMGB2P26583 209 aaKnown RBP4.7□□□□□ -1.66
UBE4A-201ENST00000252108 KLRK1P26718 216 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 SIK1P57059 783 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 SSRP1Q08945 709 aaKnown RBP4.7□□□□□ -1.66
UBE4A-201ENST00000252108 DPYDQ12882 1025 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 CRACR2BQ8N4Y2 399 aaPredicted RBP4.7□□□□□ -1.66
UBE4A-201ENST00000252108 BBXQ8WY36 941 aaPredicted RBP4.7□□□□□ -1.66
UBE4A-201ENST00000252108 NSUN4Q96CB9 384 aaKnown RBP4.7□□□□□ -1.66
UBE4A-201ENST00000252108 FOXP1Q9H334 677 aaPredicted RBP4.7□□□□□ -1.66
UBE4A-201ENST00000252108 FLT1P17948 1338 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 A0A087WWV3 80 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 MARCH6O60337 910 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 CA8P35219 290 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 NT5C2P49902 561 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 VPS72Q15906 364 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 CHST3Q7LGC8 479 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 VPS37DQ86XT2 251 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 FAM114A1Q8IWE2 563 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 CAGE1Q8TC20 777 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 CCDC12Q8WUD4 166 aaPredicted RBP4.7□□□□□ -1.66
UBE4A-201ENST00000252108 DPF2Q92785 391 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 COL4A5P29400 1685 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 IGKV6D-41A0A0C4DH26 115 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 PRKAB2O43741 272 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 FGFR1OPO95684 399 aaKnown RBP4.7□□□□□ -1.66
UBE4A-201ENST00000252108 UQCRFS1P1P0C7P4 283 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 RDXP35241 583 aaKnown RBP4.7□□□□□ -1.66
UBE4A-201ENST00000252108 IARSP41252 1262 aaKnown RBP4.7□□□□□ -1.66
UBE4A-201ENST00000252108 SEMA3FQ13275 785 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 IFIT5Q13325 482 aaKnown RBP4.7□□□□□ -1.66
UBE4A-201ENST00000252108 ECM1Q16610 540 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 CCDC57Q2TAC2 916 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 OTUD7BQ6GQQ9 843 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 ZNF446Q9NWS9 450 aa4.7□□□□□ -1.66
UBE4A-201ENST00000252108 ZNFX1Q9P2E3 1918 aaKnown RBP4.69□□□□□ -1.66
UBE4A-201ENST00000252108 COL2A1P02458 1487 aaPredicted RBP4.69□□□□□ -1.66
UBE4A-201ENST00000252108 OPA1O60313 960 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 H2AFXP16104 143 aaPredicted RBP4.69□□□□□ -1.66
UBE4A-201ENST00000252108 KRT83P78385 493 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 COBLL1Q53SF7 1204 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 AKNAD1Q5T1N1 836 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 KRT40Q6A162 431 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 PDXDC2PQ6P474 469 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 TMTC1Q8IUR5 882 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 PPM1EQ8WY54 764 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 KIFC2Q96AC6 838 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 PPP1R13BQ96KQ4 1090 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 KRT23Q9C075 422 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 BIN2Q9UBW5 565 aaPredicted RBP4.69□□□□□ -1.66
UBE4A-201ENST00000252108 AKR1B15C9JRZ8 316 aaPredicted RBP4.69□□□□□ -1.66
UBE4A-201ENST00000252108 RILPL1Q5EBL4 403 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 MUM1L1Q5H9M0 696 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 DPY19L2P1Q6NXN4 242 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 UTP14AQ9BVJ6 771 aaKnown RBP4.69□□□□□ -1.66
UBE4A-201ENST00000252108 IL17RBQ9NRM6 502 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 SEMA3EO15041 775 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 USO1O60763 962 aaKnown RBP4.69□□□□□ -1.66
UBE4A-201ENST00000252108 ZNF202O95125 648 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 STARD3NLO95772 234 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 APPP05067 770 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 VEGFAP15692 232 aaPredicted RBP4.69□□□□□ -1.66
UBE4A-201ENST00000252108 METAP2P50579 478 aaKnown RBP eCLIP4.69□□□□□ -1.66
UBE4A-201ENST00000252108 EHHADHQ08426 723 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 NAALADL2Q58DX5 795 aa4.69□□□□□ -1.66
UBE4A-201ENST00000252108 DZIP3Q86Y13 1208 aaKnown RBP4.69□□□□□ -1.66
UBE4A-201ENST00000252108 ENAHQ8N8S7 591 aaPredicted RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms