RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 FAAP100Q0VG06 881 aa14.76□□□□□ -0.05
RFPL3-201ENST00000249007 ANKRD33Q7Z3H0 272 aa14.76□□□□□ -0.05
RFPL3-201ENST00000249007 RNF180Q86T96 592 aa14.76□□□□□ -0.05
RFPL3-201ENST00000249007 MICALL1Q8N3F8 863 aa14.76□□□□□ -0.05
RFPL3-201ENST00000249007 SNX27Q96L92 541 aa14.76□□□□□ -0.05
RFPL3-201ENST00000249007 TOX2Q96NM4 488 aa14.76□□□□□ -0.05
RFPL3-201ENST00000249007 RAI14Q9P0K7 980 aa14.76□□□□□ -0.05
RFPL3-201ENST00000249007 MSRAQ9UJ68 235 aa14.76□□□□□ -0.05
RFPL3-201ENST00000249007 SPDYE16A6NNV3 312 aaPredicted RBP14.76□□□□□ -0.05
RFPL3-201ENST00000249007 GH2P01242 217 aa14.76□□□□□ -0.05
RFPL3-201ENST00000249007 TIMM10P62072 90 aa14.76□□□□□ -0.05
RFPL3-201ENST00000249007 PPIGQ13427 754 aaKnown RBP eCLIP14.76□□□□□ -0.05
RFPL3-201ENST00000249007 RAB30Q15771 203 aa14.76□□□□□ -0.05
RFPL3-201ENST00000249007 TMEM240Q5SV17 173 aa14.76□□□□□ -0.05
RFPL3-201ENST00000249007 RASIP1Q5U651 963 aa14.76□□□□□ -0.05
RFPL3-201ENST00000249007 NOL10Q9BSC4 688 aaKnown RBP14.76□□□□□ -0.05
RFPL3-201ENST00000249007 SLC5A4Q9NY91 659 aa14.76□□□□□ -0.05
RFPL3-201ENST00000249007 SALL2Q9Y467 1007 aaPredicted RBP14.76□□□□□ -0.05
RFPL3-201ENST00000249007 SUPT16HQ9Y5B9 1047 aaKnown RBP14.76□□□□□ -0.05
RFPL3-201ENST00000249007 WDFY4Q6ZS81 3184 aa14.75□□□□□ -0.05
RFPL3-201ENST00000249007 CACNA1AO00555 2505 aa14.75□□□□□ -0.05
RFPL3-201ENST00000249007 COBLO75128 1261 aa14.75□□□□□ -0.05
RFPL3-201ENST00000249007 PGK1P00558 417 aa14.75□□□□□ -0.05
RFPL3-201ENST00000249007 USP14P54578 494 aa14.75□□□□□ -0.05
RFPL3-201ENST00000249007 MFSD5Q6N075 450 aa14.75□□□□□ -0.05
RFPL3-201ENST00000249007 TBC1D9Q6ZT07 1266 aa14.75□□□□□ -0.05
RFPL3-201ENST00000249007 C16orf59Q7L2K0 433 aa14.75□□□□□ -0.05
RFPL3-201ENST00000249007 MAPKAPK5Q8IW41 473 aa14.75□□□□□ -0.05
RFPL3-201ENST00000249007 MOV10L1Q9BXT6 1211 aaKnown RBP14.75□□□□□ -0.05
RFPL3-201ENST00000249007 SLC28A3Q9HAS3 691 aa14.75□□□□□ -0.05
RFPL3-201ENST00000249007 PALD1Q9ULE6 856 aa14.75□□□□□ -0.05
RFPL3-201ENST00000249007 MVPQ14764 893 aaKnown RBP14.74□□□□□ -0.05
RFPL3-201ENST00000249007 SKIV2LQ15477 1246 aaKnown RBP14.74□□□□□ -0.05
RFPL3-201ENST00000249007 PI16Q6UXB8 463 aa14.74□□□□□ -0.05
RFPL3-201ENST00000249007 TGFBRAP1Q8WUH2 860 aa14.74□□□□□ -0.05
RFPL3-201ENST00000249007 KIAA1683Q9H0B3 1180 aa14.74□□□□□ -0.05
RFPL3-201ENST00000249007 HMG20BQ9P0W2 317 aa14.74□□□□□ -0.05
RFPL3-201ENST00000249007 TBX21Q9UL17 535 aa14.74□□□□□ -0.05
RFPL3-201ENST00000249007 BRWD1Q9NSI6 2320 aa14.74□□□□□ -0.05
RFPL3-201ENST00000249007 FLT1P17948 1338 aa14.73□□□□□ -0.05
RFPL3-201ENST00000249007 A0A1B0GUL7 405 aa14.73□□□□□ -0.05
RFPL3-201ENST00000249007 GPR37L1O60883 481 aa14.73□□□□□ -0.05
RFPL3-201ENST00000249007 PLCG2P16885 1265 aa14.73□□□□□ -0.05
RFPL3-201ENST00000249007 PSRC1Q6PGN9 363 aaPredicted RBP14.73□□□□□ -0.05
RFPL3-201ENST00000249007 ATF7IPQ6VMQ6 1270 aa14.73□□□□□ -0.05
RFPL3-201ENST00000249007 SPATA5Q8NB90 893 aa14.73□□□□□ -0.05
RFPL3-201ENST00000249007 XAGE2Q96GT9 111 aa14.73□□□□□ -0.05
RFPL3-201ENST00000249007 NKX2-4Q9H2Z4 354 aa14.73□□□□□ -0.05
RFPL3-201ENST00000249007 RPAP3Q9H6T3 665 aaPredicted RBP14.73□□□□□ -0.05
RFPL3-201ENST00000249007 STARD7Q9NQZ5 370 aa14.73□□□□□ -0.05
RFPL3-201ENST00000249007 AATFQ9NY61 560 aaKnown RBP eCLIP14.73□□□□□ -0.05
RFPL3-201ENST00000249007 PA2G4Q9UQ80 394 aaKnown RBP14.73□□□□□ -0.05
RFPL3-201ENST00000249007 ERC2O15083 957 aa14.72□□□□□ -0.05
RFPL3-201ENST00000249007 BAG3O95817 575 aa14.72□□□□□ -0.05
RFPL3-201ENST00000249007 HLA-DOAP06340 250 aa14.72□□□□□ -0.05
RFPL3-201ENST00000249007 CSF2RAP15509 400 aa14.72□□□□□ -0.05
RFPL3-201ENST00000249007 ERCC3P19447 782 aa14.72□□□□□ -0.05
RFPL3-201ENST00000249007 ZNF365Q70YC5 407 aa14.72□□□□□ -0.05
RFPL3-201ENST00000249007 SHCBP1Q8NEM2 672 aa14.72□□□□□ -0.05
RFPL3-201ENST00000249007 HERVK_113Q902F9 699 aa14.72□□□□□ -0.05
RFPL3-201ENST00000249007 MAML3Q96JK9 1138 aa14.72□□□□□ -0.05
RFPL3-201ENST00000249007 SPATC1LQ9H0A9 340 aa14.72□□□□□ -0.05
RFPL3-201ENST00000249007 C11orf16Q9NQ32 467 aa14.72□□□□□ -0.05
RFPL3-201ENST00000249007 NRBP1Q9UHY1 535 aa14.72□□□□□ -0.05
RFPL3-201ENST00000249007 PTPRCP08575 1304 aa14.71□□□□□ -0.05
RFPL3-201ENST00000249007 FAM86C2PA6NEL3 165 aa14.71□□□□□ -0.05
RFPL3-201ENST00000249007 APBB1O00213 710 aa14.71□□□□□ -0.05
RFPL3-201ENST00000249007 ACRP10323 421 aa14.71□□□□□ -0.05
RFPL3-201ENST00000249007 RAB3GAP1Q15042 981 aa14.71□□□□□ -0.05
RFPL3-201ENST00000249007 TMEM199Q8N511 208 aa14.71□□□□□ -0.05
RFPL3-201ENST00000249007 NUP133Q8WUM0 1156 aa14.71□□□□□ -0.05
RFPL3-201ENST00000249007 LRP2BPQ9P2M1 347 aa14.71□□□□□ -0.05
RFPL3-201ENST00000249007 SAP30BPQ9UHR5 308 aaKnown RBP14.71□□□□□ -0.05
RFPL3-201ENST00000249007 ACLYP53396 1101 aa14.7□□□□□ -0.06
RFPL3-201ENST00000249007 ABRAQ8N0Z2 381 aa14.7□□□□□ -0.06
RFPL3-201ENST00000249007 ACER1Q8TDN7 264 aa14.7□□□□□ -0.06
RFPL3-201ENST00000249007 UBE2Q2Q8WVN8 375 aa14.7□□□□□ -0.06
RFPL3-201ENST00000249007 MTIF3Q9H2K0 278 aaKnown RBP14.7□□□□□ -0.06
RFPL3-201ENST00000249007 AKAP2Q9Y2D5 859 aa14.7□□□□□ -0.06
RFPL3-201ENST00000249007 YBX2Q9Y2T7 364 aaKnown RBP14.7□□□□□ -0.06
RFPL3-201ENST00000249007 GBF1Q92538 1859 aa14.7□□□□□ -0.06
RFPL3-201ENST00000249007 MROH7Q68CQ1 1323 aa14.7□□□□□ -0.06
RFPL3-201ENST00000249007 UBTFL1P0CB47 393 aaPredicted RBP14.69□□□□□ -0.06
RFPL3-201ENST00000249007 MRE11P49959 708 aa14.69□□□□□ -0.06
RFPL3-201ENST00000249007 LENG1Q96BZ8 264 aaPredicted RBP14.69□□□□□ -0.06
RFPL3-201ENST00000249007 CDK5RAP2Q96SN8 1893 aa14.69□□□□□ -0.06
RFPL3-201ENST00000249007 TSEN34Q9BSV6 310 aaKnown RBP14.69□□□□□ -0.06
RFPL3-201ENST00000249007 MROH8Q9H579 483 aa14.69□□□□□ -0.06
RFPL3-201ENST00000249007 HOXC10Q9NYD6 342 aa14.69□□□□□ -0.06
RFPL3-201ENST00000249007 ROBO3Q96MS0 1386 aa14.69□□□□□ -0.06
RFPL3-201ENST00000249007 ZNF521Q96K83 1311 aa14.69□□□□□ -0.06
RFPL3-201ENST00000249007 FOCADQ5VW36 1801 aa14.69□□□□□ -0.06
RFPL3-201ENST00000249007 ADAMTS4O75173 837 aa14.69□□□□□ -0.06
RFPL3-201ENST00000249007 PLS1Q14651 629 aa14.69□□□□□ -0.06
RFPL3-201ENST00000249007 COG2Q14746 738 aa14.69□□□□□ -0.06
RFPL3-201ENST00000249007 GORABQ5T7V8 394 aa14.69□□□□□ -0.06
RFPL3-201ENST00000249007 PPP2R2DQ66LE6 453 aa14.69□□□□□ -0.06
RFPL3-201ENST00000249007 NAA16Q6N069 864 aaPredicted RBP14.69□□□□□ -0.06
RFPL3-201ENST00000249007 NCAPG2Q86XI2 1143 aa14.69□□□□□ -0.06
RFPL3-201ENST00000249007 MRPL50Q8N5N7 158 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms