RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 SHISA4Q96DD7 197 aa17.29■□□□□ 0.36
DDX49-201ENST00000247003 CSRNP2Q9H175 543 aa17.29■□□□□ 0.36
DDX49-201ENST00000247003 SH3GLB2Q9NR46 395 aa17.29■□□□□ 0.36
DDX49-201ENST00000247003 IL17RBQ9NRM6 502 aa17.29■□□□□ 0.36
DDX49-201ENST00000247003 STX8Q9UNK0 236 aa17.29■□□□□ 0.36
DDX49-201ENST00000247003 FLT1P17948 1338 aa17.29■□□□□ 0.36
DDX49-201ENST00000247003 C16orf86Q6ZW13 317 aa17.28■□□□□ 0.36
DDX49-201ENST00000247003 C17orf53Q8N3J3 647 aaPredicted RBP17.28■□□□□ 0.36
DDX49-201ENST00000247003 CCDC148Q8NFR7 591 aa17.28■□□□□ 0.36
DDX49-201ENST00000247003 SMARCE1Q969G3 411 aa17.28■□□□□ 0.36
DDX49-201ENST00000247003 FAM163AQ96GL9 167 aaPredicted RBP17.28■□□□□ 0.36
DDX49-201ENST00000247003 COA1Q9GZY4 146 aa17.28■□□□□ 0.36
DDX49-201ENST00000247003 ATP6V0A2Q9Y487 856 aa17.28■□□□□ 0.36
DDX49-201ENST00000247003 FAM205AQ6ZU69 1335 aa17.28■□□□□ 0.36
DDX49-201ENST00000247003 ANKRD31Q8N7Z5 1873 aa17.28■□□□□ 0.36
DDX49-201ENST00000247003 GAKO14976 1311 aa17.28■□□□□ 0.36
DDX49-201ENST00000247003 USP17L3A6NCW0 530 aa17.28■□□□□ 0.36
DDX49-201ENST00000247003 USP17L4A6NCW7 530 aa17.28■□□□□ 0.36
DDX49-201ENST00000247003 FAM205CA6NFA0 338 aa17.28■□□□□ 0.36
DDX49-201ENST00000247003 MYO1BO43795 1136 aa17.28■□□□□ 0.36
DDX49-201ENST00000247003 PLCD1P51178 756 aa17.28■□□□□ 0.36
DDX49-201ENST00000247003 GRIN1Q05586 938 aa17.28■□□□□ 0.36
DDX49-201ENST00000247003 USP17L1Q7RTZ2 530 aa17.28■□□□□ 0.36
DDX49-201ENST00000247003 TNFRSF25Q93038 417 aa17.28■□□□□ 0.36
DDX49-201ENST00000247003 LZTS2Q9BRK4 669 aa17.28■□□□□ 0.36
DDX49-201ENST00000247003 IMPACTQ9P2X3 320 aa17.28■□□□□ 0.36
DDX49-201ENST00000247003 SERTAD1Q9UHV2 236 aa17.28■□□□□ 0.36
DDX49-201ENST00000247003 SUGT1Q9Y2Z0 365 aa17.28■□□□□ 0.36
DDX49-201ENST00000247003 MYH1P12882 1939 aa17.27■□□□□ 0.36
DDX49-201ENST00000247003 CBFA2T2O43439 604 aa17.27■□□□□ 0.36
DDX49-201ENST00000247003 NPR1P16066 1061 aa17.27■□□□□ 0.36
DDX49-201ENST00000247003 RASA1P20936 1047 aa17.27■□□□□ 0.36
DDX49-201ENST00000247003 PIK3AP1Q6ZUJ8 805 aa17.27■□□□□ 0.36
DDX49-201ENST00000247003 FILIP1Q7Z7B0 1213 aa17.27■□□□□ 0.36
DDX49-201ENST00000247003 TRIML1Q8N9V2 468 aa17.27■□□□□ 0.36
DDX49-201ENST00000247003 FLAD1Q8NFF5 587 aa17.27■□□□□ 0.36
DDX49-201ENST00000247003 PRIMPOLQ96LW4 560 aa17.27■□□□□ 0.36
DDX49-201ENST00000247003 EYA3Q99504 573 aa17.27■□□□□ 0.36
DDX49-201ENST00000247003 PCDHA5Q9Y5H7 936 aa17.27■□□□□ 0.36
DDX49-201ENST00000247003 FOCADQ5VW36 1801 aa17.27■□□□□ 0.35
DDX49-201ENST00000247003 NRXN2Q9P2S2 1712 aa17.27■□□□□ 0.35
DDX49-201ENST00000247003 NRDCO43847 1150 aa17.26■□□□□ 0.35
DDX49-201ENST00000247003 ALDH1B1P30837 517 aa17.26■□□□□ 0.35
DDX49-201ENST00000247003 PDE6BP35913 854 aa17.26■□□□□ 0.35
DDX49-201ENST00000247003 CDK8P49336 464 aa17.26■□□□□ 0.35
DDX49-201ENST00000247003 GTF2IP78347 998 aa17.26■□□□□ 0.35
DDX49-201ENST00000247003 LRMPQ12912 555 aa17.26■□□□□ 0.35
DDX49-201ENST00000247003 CCDC144BQ3MJ40 725 aa17.26■□□□□ 0.35
DDX49-201ENST00000247003 LRRC8AQ8IWT6 810 aa17.26■□□□□ 0.35
DDX49-201ENST00000247003 PDILTQ8N807 584 aa17.26■□□□□ 0.35
DDX49-201ENST00000247003 SLC44A5Q8NCS7 719 aa17.26■□□□□ 0.35
DDX49-201ENST00000247003 PYM1Q9BRP8 204 aaKnown RBP17.26■□□□□ 0.35
DDX49-201ENST00000247003 ZC3H12CQ9C0D7 883 aaKnown RBP17.26■□□□□ 0.35
DDX49-201ENST00000247003 SNED1Q8TER0 1413 aa17.26■□□□□ 0.35
DDX49-201ENST00000247003 UQCRHLA0A096LP55 91 aa17.26■□□□□ 0.35
DDX49-201ENST00000247003 G3V3G9 751 aa17.26■□□□□ 0.35
DDX49-201ENST00000247003 RIMBP2O15034 1052 aa17.26■□□□□ 0.35
DDX49-201ENST00000247003 UQCRHP07919 91 aa17.26■□□□□ 0.35
DDX49-201ENST00000247003 ZNF174Q15697 407 aa17.26■□□□□ 0.35
DDX49-201ENST00000247003 NPY5RQ15761 445 aa17.26■□□□□ 0.35
DDX49-201ENST00000247003 EARS2Q5JPH6 523 aaKnown RBP17.26■□□□□ 0.35
DDX49-201ENST00000247003 DCAF8Q5TAQ9 597 aa17.26■□□□□ 0.35
DDX49-201ENST00000247003 BLIDQ8IZY5 108 aa17.26■□□□□ 0.35
DDX49-201ENST00000247003 IFNKQ9P0W0 207 aa17.26■□□□□ 0.35
DDX49-201ENST00000247003 MAD2L2Q9UI95 211 aa17.26■□□□□ 0.35
DDX49-201ENST00000247003 PCDHA4Q9UN74 947 aa17.26■□□□□ 0.35
DDX49-201ENST00000247003 LMOD1P29536 600 aaPredicted RBP17.25■□□□□ 0.35
DDX49-201ENST00000247003 ATP2C1P98194 919 aaPredicted RBP17.25■□□□□ 0.35
DDX49-201ENST00000247003 NCAPHQ15003 741 aa17.25■□□□□ 0.35
DDX49-201ENST00000247003 GALNT17Q6IS24 598 aa17.25■□□□□ 0.35
DDX49-201ENST00000247003 FAM177A1Q8N128 213 aaPredicted RBP17.25■□□□□ 0.35
DDX49-201ENST00000247003 CACTINQ8WUQ7 758 aaKnown RBP17.25■□□□□ 0.35
DDX49-201ENST00000247003 DHX58Q96C10 678 aa17.25■□□□□ 0.35
DDX49-201ENST00000247003 TMEM47Q9BQJ4 181 aa17.25■□□□□ 0.35
DDX49-201ENST00000247003 XPO4Q9C0E2 1151 aaKnown RBP17.25■□□□□ 0.35
DDX49-201ENST00000247003 MTMR7Q9Y216 660 aa17.25■□□□□ 0.35
DDX49-201ENST00000247003 PARP3Q9Y6F1 533 aa17.25■□□□□ 0.35
DDX49-201ENST00000247003 QSER1Q2KHR3 1735 aa17.25■□□□□ 0.35
DDX49-201ENST00000247003 PLSCR1O15162 318 aa17.24■□□□□ 0.35
DDX49-201ENST00000247003 ACTN4O43707 911 aaKnown RBP17.24■□□□□ 0.35
DDX49-201ENST00000247003 SERPINC1P01008 464 aa17.24■□□□□ 0.35
DDX49-201ENST00000247003 RHBDL3P58872 404 aa17.24■□□□□ 0.35
DDX49-201ENST00000247003 MDM2Q00987 491 aaPredicted RBP17.24■□□□□ 0.35
DDX49-201ENST00000247003 NT5DC1Q5TFE4 455 aa17.24■□□□□ 0.35
DDX49-201ENST00000247003 DPP8Q6V1X1 898 aaPredicted RBP17.24■□□□□ 0.35
DDX49-201ENST00000247003 PROM2Q8N271 834 aa17.24■□□□□ 0.35
DDX49-201ENST00000247003 STAG2Q8N3U4 1231 aa17.24■□□□□ 0.35
DDX49-201ENST00000247003 MLKLQ8NB16 471 aa17.24■□□□□ 0.35
DDX49-201ENST00000247003 CCDC150Q8NCX0 1101 aa17.24■□□□□ 0.35
DDX49-201ENST00000247003 NEDD1Q8NHV4 660 aa17.24■□□□□ 0.35
DDX49-201ENST00000247003 CCDC12Q8WUD4 166 aaPredicted RBP17.24■□□□□ 0.35
DDX49-201ENST00000247003 SYMPKQ92797 1274 aaKnown RBP17.24■□□□□ 0.35
DDX49-201ENST00000247003 MAN1B1Q9UKM7 699 aa17.24■□□□□ 0.35
DDX49-201ENST00000247003 CCDC194A0A1B0GVG4 234 aa17.24■□□□□ 0.35
DDX49-201ENST00000247003 SRGNP10124 158 aa17.24■□□□□ 0.35
DDX49-201ENST00000247003 FANCCQ00597 558 aa17.24■□□□□ 0.35
DDX49-201ENST00000247003 PTGDRQ13258 359 aa17.24■□□□□ 0.35
DDX49-201ENST00000247003 ZNF827Q17R98 1081 aa17.24■□□□□ 0.35
DDX49-201ENST00000247003 HEATR3Q7Z4Q2 680 aa17.24■□□□□ 0.35
DDX49-201ENST00000247003 GPKOWQ92917 476 aaPredicted RBP eCLIP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms