RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 ANLNQ9NQW6 1124 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 KDM6BO15054 1643 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 ZFYP08048 801 aaPredicted RBP8.33□□□□□ -1.08
RIF1-201ENST00000243326 MTUS1Q9ULD2 1270 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 ADGRL1O94910 1474 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 CYP27A1Q02318 531 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 STAG1Q8WVM7 1258 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 SYNJ2BP-COX16A0A087WUM0 186 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 PARP1P09874 1014 aaKnown RBP8.33□□□□□ -1.08
RIF1-201ENST00000243326 CNGA1P29973 690 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 PDCLQ13371 301 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 CASC4Q6P4E1 433 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 CNNM2Q9H8M5 875 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 COX16Q9P0S2 106 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 IMPACTQ9P2X3 320 aa8.33□□□□□ -1.08
RIF1-201ENST00000243326 PNMA6AP0CW24 399 aaPredicted RBP8.32□□□□□ -1.08
RIF1-201ENST00000243326 SF3B2Q13435 895 aaKnown RBP8.32□□□□□ -1.08
RIF1-201ENST00000243326 MAPKAPK5Q8IW41 473 aa8.32□□□□□ -1.08
RIF1-201ENST00000243326 KCNH5Q8NCM2 988 aa8.32□□□□□ -1.08
RIF1-201ENST00000243326 ARPP21Q9UBL0 812 aaPredicted RBP8.32□□□□□ -1.08
RIF1-201ENST00000243326 IFNB1P01574 187 aa8.32□□□□□ -1.08
RIF1-201ENST00000243326 MKRN4PQ13434 485 aaPredicted RBP8.32□□□□□ -1.08
RIF1-201ENST00000243326 ZNF365Q70YC5 407 aa8.32□□□□□ -1.08
RIF1-201ENST00000243326 MAK16Q9BXY0 300 aaKnown RBP8.32□□□□□ -1.08
RIF1-201ENST00000243326 RNMTO43148 476 aaKnown RBP8.32□□□□□ -1.08
RIF1-201ENST00000243326 COG7P83436 770 aa8.32□□□□□ -1.08
RIF1-201ENST00000243326 PRKG1Q13976 671 aa8.32□□□□□ -1.08
RIF1-201ENST00000243326 LRWD1Q9UFC0 647 aa8.32□□□□□ -1.08
RIF1-201ENST00000243326 PRAMEF22A3QJZ6 481 aa8.32□□□□□ -1.08
RIF1-201ENST00000243326 NDC80O14777 642 aa8.32□□□□□ -1.08
RIF1-201ENST00000243326 ZNF853P0CG23 659 aa8.32□□□□□ -1.08
RIF1-201ENST00000243326 MYCT1Q8N699 235 aa8.32□□□□□ -1.08
RIF1-201ENST00000243326 GBP7Q8N8V2 638 aaPredicted RBP8.32□□□□□ -1.08
RIF1-201ENST00000243326 FAM169AQ9Y6X4 670 aa8.32□□□□□ -1.08
RIF1-201ENST00000243326 LRRC24Q50LG9 513 aa8.32□□□□□ -1.08
RIF1-201ENST00000243326 TMTC1Q8IUR5 882 aa8.32□□□□□ -1.08
RIF1-201ENST00000243326 RGS16O15492 202 aaPredicted RBP8.32□□□□□ -1.08
RIF1-201ENST00000243326 EHMT1Q9H9B1 1298 aa8.32□□□□□ -1.08
RIF1-201ENST00000243326 POLR3AO14802 1390 aaPredicted RBP8.32□□□□□ -1.08
RIF1-201ENST00000243326 GCNT3O95395 438 aa8.32□□□□□ -1.08
RIF1-201ENST00000243326 HERC4Q5GLZ8 1057 aaPredicted RBP8.32□□□□□ -1.08
RIF1-201ENST00000243326 ZBTB12Q9Y330 459 aaPredicted RBP8.32□□□□□ -1.08
RIF1-201ENST00000243326 SMIM24O75264 130 aa8.32□□□□□ -1.08
RIF1-201ENST00000243326 RCN2Q14257 317 aa8.32□□□□□ -1.08
RIF1-201ENST00000243326 GOLGA5Q8TBA6 731 aa8.32□□□□□ -1.08
RIF1-201ENST00000243326 RNF123Q5XPI4 1314 aa8.32□□□□□ -1.08
RIF1-201ENST00000243326 POC1B-GALNT4F8VUJ3 575 aa8.32□□□□□ -1.08
RIF1-201ENST00000243326 ADORA1P30542 326 aa8.32□□□□□ -1.08
RIF1-201ENST00000243326 MAP3K9P80192 1104 aa8.32□□□□□ -1.08
RIF1-201ENST00000243326 SEPT10Q9P0V9 454 aa8.32□□□□□ -1.08
RIF1-201ENST00000243326 ITGA6P23229 1130 aa8.32□□□□□ -1.08
RIF1-201ENST00000243326 CYTH2Q99418 400 aa8.32□□□□□ -1.08
RIF1-201ENST00000243326 SAMSN1Q9NSI8 373 aaKnown RBP8.32□□□□□ -1.08
RIF1-201ENST00000243326 F5H423 210 aaPredicted RBP8.32□□□□□ -1.08
RIF1-201ENST00000243326 UBXN2AP68543 259 aa8.32□□□□□ -1.08
RIF1-201ENST00000243326 FAM184BQ9ULE4 1060 aa8.32□□□□□ -1.08
RIF1-201ENST00000243326 H0Y3Z8 333 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 GOLPH3LQ9H4A5 285 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 FIS1Q9Y3D6 152 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 TRPA1O75762 1119 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 SLC9C1Q4G0N8 1177 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 CCDC38Q502W7 563 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 EAPPQ56P03 285 aaPredicted RBP8.31□□□□□ -1.08
RIF1-201ENST00000243326 ANKLE2Q86XL3 938 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 HIPK4Q8NE63 616 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 SWAP70Q9UH65 585 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 CRCPO75575 148 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 ALDH3A1P30838 453 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 SSTR3P32745 418 aaPredicted RBP8.31□□□□□ -1.08
RIF1-201ENST00000243326 TMED1Q13445 227 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 KMT5BQ4FZB7 885 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 CFAP221Q4G0U5 840 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 SDCCAG8Q86SQ7 713 aaPredicted RBP8.31□□□□□ -1.08
RIF1-201ENST00000243326 YIPF3Q9GZM5 350 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 SPDYE3A6NKU9 549 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 SMC1BQ8NDV3 1235 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 TRIM4Q9C037 500 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 EFCC1Q9HA90 598 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 HELLSQ9NRZ9 838 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 TXNDC16Q9P2K2 825 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 CFAP43Q8NDM7 1665 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 HLA-DOAP06340 250 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 INF2Q27J81 1249 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 SNAP25P60880 206 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 SMCR8Q8TEV9 937 aaPredicted RBP8.31□□□□□ -1.08
RIF1-201ENST00000243326 JDP2Q8WYK2 163 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 PUS3Q9BZE2 481 aaKnown RBP8.31□□□□□ -1.08
RIF1-201ENST00000243326 LSG1Q9H089 658 aaKnown RBP8.31□□□□□ -1.08
RIF1-201ENST00000243326 KCNF1Q9H3M0 494 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 PFDN4Q9NQP4 134 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 DNMBPQ6XZF7 1577 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 TCP10Q12799 353 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 MAN1B1Q9UKM7 699 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 GINS2Q9Y248 185 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 SH3BP5O60239 455 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 TMED2Q15363 201 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 CTAGE3PQ8IX95 158 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 HDAC6Q9UBN7 1215 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 JRKLQ9Y4A0 524 aa8.31□□□□□ -1.08
RIF1-201ENST00000243326 PZPP20742 1482 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 371 ms