RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 CCDC40Q4G0X9 1142 aa12.3□□□□□ -0.44
COPA-201ENST00000241704 KRT40Q6A162 431 aa12.3□□□□□ -0.44
COPA-201ENST00000241704 DTHD1Q6ZMT9 781 aa12.3□□□□□ -0.44
COPA-201ENST00000241704 PHKBQ93100 1093 aa12.3□□□□□ -0.44
COPA-201ENST00000241704 PARD6BQ9BYG5 372 aa12.3□□□□□ -0.44
COPA-201ENST00000241704 HLFQ16534 295 aa12.29□□□□□ -0.44
COPA-201ENST00000241704 CCDC174Q6PII3 467 aa12.29□□□□□ -0.44
COPA-201ENST00000241704 ZNF589Q86UQ0 364 aaPredicted RBP12.29□□□□□ -0.44
COPA-201ENST00000241704 VPS36Q86VN1 386 aa12.29□□□□□ -0.44
COPA-201ENST00000241704 TICAM2Q86XR7 235 aa12.29□□□□□ -0.44
COPA-201ENST00000241704 DCPSQ96C86 337 aaKnown RBP12.29□□□□□ -0.44
COPA-201ENST00000241704 SUFUQ9UMX1 484 aa12.29□□□□□ -0.44
COPA-201ENST00000241704 NOD1Q9Y239 953 aa12.29□□□□□ -0.44
COPA-201ENST00000241704 FAN1Q9Y2M0 1017 aa12.29□□□□□ -0.44
COPA-201ENST00000241704 JCADQ9P266 1359 aa12.29□□□□□ -0.44
COPA-201ENST00000241704 AP5Z1O43299 807 aa12.29□□□□□ -0.44
COPA-201ENST00000241704 CYP21A2P08686 494 aa12.29□□□□□ -0.44
COPA-201ENST00000241704 SLC1A4P43007 532 aa12.29□□□□□ -0.44
COPA-201ENST00000241704 ERFEQ4G0M1 354 aa12.29□□□□□ -0.44
COPA-201ENST00000241704 CPXCR1Q8N123 301 aa12.29□□□□□ -0.44
COPA-201ENST00000241704 IQUBQ8NA54 791 aa12.29□□□□□ -0.44
COPA-201ENST00000241704 TGFBRAP1Q8WUH2 860 aa12.29□□□□□ -0.44
COPA-201ENST00000241704 TRIM47Q96LD4 638 aa12.29□□□□□ -0.44
COPA-201ENST00000241704 ADCY9O60503 1353 aa12.29□□□□□ -0.44
COPA-201ENST00000241704 N4BP3O15049 544 aa12.29□□□□□ -0.44
COPA-201ENST00000241704 DTNBO60941 627 aa12.29□□□□□ -0.44
COPA-201ENST00000241704 PPFIA4O75335 1185 aa12.29□□□□□ -0.44
COPA-201ENST00000241704 MMP10P09238 476 aa12.29□□□□□ -0.44
COPA-201ENST00000241704 SUSD4Q5VX71 490 aa12.29□□□□□ -0.44
COPA-201ENST00000241704 GOLGA6L10A6NI86 522 aa12.29□□□□□ -0.44
COPA-201ENST00000241704 CETN2P41208 172 aa12.29□□□□□ -0.44
COPA-201ENST00000241704 TFAP4Q01664 338 aa12.29□□□□□ -0.44
COPA-201ENST00000241704 CTAGE1Q96RT6 745 aa12.29□□□□□ -0.44
COPA-201ENST00000241704 LEMD3Q9Y2U8 911 aa12.29□□□□□ -0.44
COPA-201ENST00000241704 FANCCQ00597 558 aa12.28□□□□□ -0.44
COPA-201ENST00000241704 ENOX2Q16206 610 aaKnown RBP12.28□□□□□ -0.44
COPA-201ENST00000241704 KRT79Q5XKE5 535 aa12.28□□□□□ -0.44
COPA-201ENST00000241704 FCHSD1Q86WN1 690 aa12.28□□□□□ -0.44
COPA-201ENST00000241704 GJD4Q96KN9 370 aaPredicted RBP12.28□□□□□ -0.44
COPA-201ENST00000241704 DCAF15Q66K64 600 aa12.28□□□□□ -0.44
COPA-201ENST00000241704 ZNF526Q8TF50 670 aaPredicted RBP12.28□□□□□ -0.44
COPA-201ENST00000241704 FUCA2Q9BTY2 467 aa12.28□□□□□ -0.44
COPA-201ENST00000241704 PSMA7O14818 248 aa12.28□□□□□ -0.44
COPA-201ENST00000241704 HSPA1LP34931 641 aa12.28□□□□□ -0.44
COPA-201ENST00000241704 SDR42E1Q8WUS8 393 aa12.28□□□□□ -0.44
COPA-201ENST00000241704 GPHNQ9NQX3 736 aaPredicted RBP12.28□□□□□ -0.44
COPA-201ENST00000241704 ATP10DQ9P241 1426 aa12.28□□□□□ -0.44
COPA-201ENST00000241704 CYP19A1P11511 503 aaPredicted RBP12.27□□□□□ -0.44
COPA-201ENST00000241704 ZNF174Q15697 407 aa12.27□□□□□ -0.44
COPA-201ENST00000241704 ZNF654Q8IZM8 581 aa12.27□□□□□ -0.44
COPA-201ENST00000241704 RPAP1Q9BWH6 1393 aaPredicted RBP12.27□□□□□ -0.44
COPA-201ENST00000241704 SCNN1DP51172 638 aa12.27□□□□□ -0.44
COPA-201ENST00000241704 CLNS1AP54105 237 aaKnown RBP12.27□□□□□ -0.44
COPA-201ENST00000241704 C11orf57Q6ZUT1 292 aaPredicted RBP12.27□□□□□ -0.44
COPA-201ENST00000241704 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.27□□□□□ -0.44
COPA-201ENST00000241704 LZTS2Q9BRK4 669 aa12.27□□□□□ -0.44
COPA-201ENST00000241704 XDHP47989 1333 aa12.27□□□□□ -0.44
COPA-201ENST00000241704 ANKRD65E5RJM6 399 aa12.27□□□□□ -0.45
COPA-201ENST00000241704 PPEF1O14829 653 aaPredicted RBP12.27□□□□□ -0.45
COPA-201ENST00000241704 BBOX1O75936 387 aa12.27□□□□□ -0.45
COPA-201ENST00000241704 ADD2P35612 726 aa12.27□□□□□ -0.45
COPA-201ENST00000241704 NOP2P46087 812 aaKnown RBP12.27□□□□□ -0.45
COPA-201ENST00000241704 ASIC1P78348 528 aa12.27□□□□□ -0.45
COPA-201ENST00000241704 MAP3K9P80192 1104 aa12.27□□□□□ -0.45
COPA-201ENST00000241704 FAM204AQ9H8W3 233 aa12.27□□□□□ -0.45
COPA-201ENST00000241704 LZTFL1Q9NQ48 299 aa12.27□□□□□ -0.45
COPA-201ENST00000241704 NBPF26B4DH59 902 aa12.27□□□□□ -0.45
COPA-201ENST00000241704 OPA1O60313 960 aa12.27□□□□□ -0.45
COPA-201ENST00000241704 RPS6KA4O75676 772 aa12.27□□□□□ -0.45
COPA-201ENST00000241704 SATB1Q01826 763 aa12.27□□□□□ -0.45
COPA-201ENST00000241704 TRIM28Q13263 835 aaKnown RBP12.27□□□□□ -0.45
COPA-201ENST00000241704 NEDD9Q14511 834 aa12.27□□□□□ -0.45
COPA-201ENST00000241704 NBPF10Q6P3W6 841 aaKnown RBP12.27□□□□□ -0.45
COPA-201ENST00000241704 NSMFQ6X4W1 530 aa12.27□□□□□ -0.45
COPA-201ENST00000241704 NBPF15Q8N660 670 aa12.27□□□□□ -0.45
COPA-201ENST00000241704 ISCA1Q9BUE6 129 aa12.27□□□□□ -0.45
COPA-201ENST00000241704 ZBTB21Q9ULJ3 1066 aa12.27□□□□□ -0.45
COPA-201ENST00000241704 CAPN7Q9Y6W3 813 aa12.27□□□□□ -0.45
COPA-201ENST00000241704 ARHGAP25P42331 645 aa12.26□□□□□ -0.45
COPA-201ENST00000241704 NAA25Q14CX7 972 aa12.26□□□□□ -0.45
COPA-201ENST00000241704 ZNF569Q5MCW4 686 aa12.26□□□□□ -0.45
COPA-201ENST00000241704 TMC4Q7Z404 712 aa12.26□□□□□ -0.45
COPA-201ENST00000241704 RNF216Q9NWF9 866 aaPredicted RBP12.26□□□□□ -0.45
COPA-201ENST00000241704 VWA3AA6NCI4 1184 aa12.26□□□□□ -0.45
COPA-201ENST00000241704 CUTAO60888 179 aa12.26□□□□□ -0.45
COPA-201ENST00000241704 L2HGDHQ9H9P8 463 aa12.26□□□□□ -0.45
COPA-201ENST00000241704 ZBED4O75132 1171 aa12.26□□□□□ -0.45
COPA-201ENST00000241704 PCP11498 1178 aaKnown RBP12.26□□□□□ -0.45
COPA-201ENST00000241704 NAP1L4Q99733 375 aaKnown RBP12.26□□□□□ -0.45
COPA-201ENST00000241704 SRP68Q9UHB9 627 aaKnown RBP12.26□□□□□ -0.45
COPA-201ENST00000241704 KCNH3Q9ULD8 1083 aa12.26□□□□□ -0.45
COPA-201ENST00000241704 PPP2R2CQ9Y2T4 447 aa12.26□□□□□ -0.45
COPA-201ENST00000241704 TADA3O75528 432 aa12.26□□□□□ -0.45
COPA-201ENST00000241704 PDIA3P30101 505 aaKnown RBP12.26□□□□□ -0.45
COPA-201ENST00000241704 DALRD3Q5D0E6 543 aaKnown RBP12.26□□□□□ -0.45
COPA-201ENST00000241704 FAM47AQ5JRC9 791 aa12.26□□□□□ -0.45
COPA-201ENST00000241704 USP37Q86T82 979 aa12.26□□□□□ -0.45
COPA-201ENST00000241704 OSBP2Q969R2 916 aa12.26□□□□□ -0.45
COPA-201ENST00000241704 ZSCAN10Q96SZ4 725 aaPredicted RBP12.26□□□□□ -0.45
COPA-201ENST00000241704 CDHR2Q9BYE9 1310 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms