RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 RNASELQ05823 741 aaKnown RBP7.43□□□□□ -1.22
CSMD2-201ENST00000241312 RPS6KA2Q15349 733 aa7.43□□□□□ -1.22
CSMD2-201ENST00000241312 UHRF1BP1Q6BDS2 1440 aa7.43□□□□□ -1.22
CSMD2-201ENST00000241312 TPTE2Q6XPS3 522 aa7.43□□□□□ -1.22
CSMD2-201ENST00000241312 ZCRB1Q8TBF4 217 aaKnown RBP7.43□□□□□ -1.22
CSMD2-201ENST00000241312 MGARPQ8TDB4 240 aa7.43□□□□□ -1.22
CSMD2-201ENST00000241312 JDP2Q8WYK2 163 aa7.43□□□□□ -1.22
CSMD2-201ENST00000241312 PASKQ96RG2 1323 aa7.43□□□□□ -1.22
CSMD2-201ENST00000241312 NCOA5Q9HCD5 579 aaKnown RBP7.43□□□□□ -1.22
CSMD2-201ENST00000241312 XAB2Q9HCS7 855 aaKnown RBP7.43□□□□□ -1.22
CSMD2-201ENST00000241312 OPHN1O60890 802 aa7.43□□□□□ -1.22
CSMD2-201ENST00000241312 HERC4Q5GLZ8 1057 aaPredicted RBP7.43□□□□□ -1.22
CSMD2-201ENST00000241312 FAF1Q9UNN5 650 aaPredicted RBP7.43□□□□□ -1.22
CSMD2-201ENST00000241312 DNM3Q9UQ16 869 aa7.43□□□□□ -1.22
CSMD2-201ENST00000241312 DNMT1P26358 1616 aaKnown RBP7.43□□□□□ -1.22
CSMD2-201ENST00000241312 IL2RBP14784 551 aa7.43□□□□□ -1.22
CSMD2-201ENST00000241312 IWS1Q96ST2 819 aa7.43□□□□□ -1.22
CSMD2-201ENST00000241312 PPP1R9AQ9ULJ8 1098 aa7.43□□□□□ -1.22
CSMD2-201ENST00000241312 ORC6Q9Y5N6 252 aa7.43□□□□□ -1.22
CSMD2-201ENST00000241312 AP1ARQ63HQ0 302 aa7.43□□□□□ -1.22
CSMD2-201ENST00000241312 CCDC13Q8IYE1 715 aa7.43□□□□□ -1.22
CSMD2-201ENST00000241312 FAM207AQ9NSI2 230 aaPredicted RBP7.43□□□□□ -1.22
CSMD2-201ENST00000241312 TPX2Q9ULW0 747 aaKnown RBP7.43□□□□□ -1.22
CSMD2-201ENST00000241312 GNGT1P63211 74 aa7.43□□□□□ -1.22
CSMD2-201ENST00000241312 RRAGAQ7L523 313 aa7.43□□□□□ -1.22
CSMD2-201ENST00000241312 OTUD7AQ8TE49 926 aaPredicted RBP7.43□□□□□ -1.22
CSMD2-201ENST00000241312 SIRT1Q96EB6 747 aa7.43□□□□□ -1.22
CSMD2-201ENST00000241312 EPS15L1Q9UBC2 864 aa7.43□□□□□ -1.22
CSMD2-201ENST00000241312 BAG5Q9UL15 447 aa7.43□□□□□ -1.22
CSMD2-201ENST00000241312 DCAF5Q96JK2 942 aa7.43□□□□□ -1.22
CSMD2-201ENST00000241312 GDAP1L1Q96MZ0 367 aa7.43□□□□□ -1.22
CSMD2-201ENST00000241312 H0YCG3 227 aa7.43□□□□□ -1.22
CSMD2-201ENST00000241312 IDI1Q13907 227 aa7.43□□□□□ -1.22
CSMD2-201ENST00000241312 ARMC9Q7Z3E5 817 aa7.43□□□□□ -1.22
CSMD2-201ENST00000241312 B4E1Z4 1266 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 GCNT3O95395 438 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 KIF11P52732 1056 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 SLC39A6Q13433 755 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 CCDC93Q567U6 631 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 PSMB7Q99436 277 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 PICK1Q9NRD5 415 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 HYOU1Q9Y4L1 999 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 YTHDC2Q9H6S0 1430 aaKnown RBP7.42□□□□□ -1.22
CSMD2-201ENST00000241312 GUCY2FP51841 1108 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 NONOQ15233 471 aaKnown RBP eCLIP7.42□□□□□ -1.22
CSMD2-201ENST00000241312 JADE1Q6IE81 842 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 MAGEF1Q9HAY2 307 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 GPATCH8Q9UKJ3 1502 aaKnown RBP7.42□□□□□ -1.22
CSMD2-201ENST00000241312 KRT24Q2M2I5 525 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 LRCH2Q5VUJ6 765 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 CTAGE3PQ8IX95 158 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 BBOF1Q8ND07 529 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 HOOK2Q96ED9 719 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 MRFAP1L1Q96HT8 127 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 TACO1Q9BSH4 297 aaKnown RBP7.42□□□□□ -1.22
CSMD2-201ENST00000241312 GPAA1O43292 621 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 SMIM24O75264 130 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 MAGEA1P43355 309 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 MORC3Q14149 939 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 KRT28Q7Z3Y7 464 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 TEX14Q8IWB6 1497 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 SART1O43290 800 aaKnown RBP7.42□□□□□ -1.22
CSMD2-201ENST00000241312 EIF4A2Q14240 407 aaKnown RBP7.42□□□□□ -1.22
CSMD2-201ENST00000241312 SNX29Q8TEQ0 813 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 NACA2Q9H009 215 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 TRPC6Q9Y210 931 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 SGSM2O43147 1006 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 SLC1A4P43007 532 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 LONRF2Q1L5Z9 754 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 CDC37L1Q7L3B6 337 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 KSR1Q8IVT5 923 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 DIS3L2Q8IYB7 885 aaKnown RBP7.42□□□□□ -1.22
CSMD2-201ENST00000241312 TEKT1Q969V4 418 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 XPO4Q9C0E2 1151 aaKnown RBP7.42□□□□□ -1.22
CSMD2-201ENST00000241312 ZNF277Q9NRM2 450 aaPredicted RBP7.42□□□□□ -1.22
CSMD2-201ENST00000241312 RAB20Q9NX57 234 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 NUMA1Q14980 2115 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 PFDN6O15212 129 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 SUN1O94901 812 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 TRIML1Q8N9V2 468 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 CNBD1Q8NA66 436 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 RABGGTAQ92696 567 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 LRWD1Q9UFC0 647 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 ZNF518AQ6AHZ1 1483 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 GADD45BO75293 160 aaPredicted RBP7.42□□□□□ -1.22
CSMD2-201ENST00000241312 ECM2O94769 699 aaPredicted RBP7.42□□□□□ -1.22
CSMD2-201ENST00000241312 IFNB1P01574 187 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 PDCD2Q16342 344 aaPredicted RBP7.42□□□□□ -1.22
CSMD2-201ENST00000241312 BSPRYQ5W0U4 402 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 DZIP3Q86Y13 1208 aaKnown RBP7.42□□□□□ -1.22
CSMD2-201ENST00000241312 ADCY8P40145 1251 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 KRT81Q14533 505 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 PPP2R5DQ14738 602 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 CWF19L2Q2TBE0 894 aaKnown RBP7.42□□□□□ -1.22
CSMD2-201ENST00000241312 PDZD4Q76G19 769 aaPredicted RBP7.42□□□□□ -1.22
CSMD2-201ENST00000241312 TEX11Q8IYF3 940 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 TSPYL6Q8N831 410 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 TXLNGQ9NUQ3 528 aa7.42□□□□□ -1.22
CSMD2-201ENST00000241312 TNNI3KQ59H18 835 aa7.41□□□□□ -1.22
CSMD2-201ENST00000241312 TRIM50Q86XT4 487 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms