RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 FGAP02671 866 aa10.9□□□□□ -0.67
TGFB3-201ENST00000238682 RHBDL3P58872 404 aa10.9□□□□□ -0.67
TGFB3-201ENST00000238682 TRDNQ13061 729 aa10.9□□□□□ -0.67
TGFB3-201ENST00000238682 KIF22Q14807 665 aa10.9□□□□□ -0.67
TGFB3-201ENST00000238682 NFKBIBQ15653 356 aa10.9□□□□□ -0.67
TGFB3-201ENST00000238682 TTC6Q86TZ1 520 aa10.9□□□□□ -0.67
TGFB3-201ENST00000238682 TMTC2Q8N394 836 aa10.9□□□□□ -0.67
TGFB3-201ENST00000238682 OPTNQ96CV9 577 aa10.9□□□□□ -0.67
TGFB3-201ENST00000238682 ZSCAN31Q96LW9 406 aaPredicted RBP10.9□□□□□ -0.67
TGFB3-201ENST00000238682 SEC62Q99442 399 aaKnown RBP10.9□□□□□ -0.67
TGFB3-201ENST00000238682 IL25Q9H293 177 aa10.9□□□□□ -0.67
TGFB3-201ENST00000238682 ARMT1Q9H993 441 aa10.9□□□□□ -0.67
TGFB3-201ENST00000238682 SWAP70Q9UH65 585 aa10.9□□□□□ -0.67
TGFB3-201ENST00000238682 CYP46A1Q9Y6A2 500 aa10.9□□□□□ -0.67
TGFB3-201ENST00000238682 CCDC85CA6NKD9 419 aa10.89□□□□□ -0.67
TGFB3-201ENST00000238682 FOXP2O15409 715 aa10.89□□□□□ -0.67
TGFB3-201ENST00000238682 TDO2P48775 406 aa10.89□□□□□ -0.67
TGFB3-201ENST00000238682 NCOA7Q8NI08 942 aa10.89□□□□□ -0.67
TGFB3-201ENST00000238682 ARMC5Q96C12 935 aa10.89□□□□□ -0.67
TGFB3-201ENST00000238682 HPS5Q9UPZ3 1129 aa10.89□□□□□ -0.67
TGFB3-201ENST00000238682 USP5P45974 858 aa10.89□□□□□ -0.67
TGFB3-201ENST00000238682 RUFY3Q7L099 469 aa10.89□□□□□ -0.67
TGFB3-201ENST00000238682 FASTKD5Q7L8L6 764 aaKnown RBP10.89□□□□□ -0.67
TGFB3-201ENST00000238682 ADGRA1Q86SQ6 560 aa10.89□□□□□ -0.67
TGFB3-201ENST00000238682 HSCBQ8IWL3 235 aa10.89□□□□□ -0.67
TGFB3-201ENST00000238682 TEX11Q8IYF3 940 aa10.89□□□□□ -0.67
TGFB3-201ENST00000238682 NEK1Q96PY6 1258 aa10.89□□□□□ -0.67
TGFB3-201ENST00000238682 DCP1AQ9NPI6 582 aaPredicted RBP10.89□□□□□ -0.67
TGFB3-201ENST00000238682 CAPN15O75808 1086 aa10.88□□□□□ -0.67
TGFB3-201ENST00000238682 HOXD10P28358 340 aa10.88□□□□□ -0.67
TGFB3-201ENST00000238682 PDE4BQ07343 736 aa10.88□□□□□ -0.67
TGFB3-201ENST00000238682 VGLL4Q14135 290 aa10.88□□□□□ -0.67
TGFB3-201ENST00000238682 AKNAD1Q5T1N1 836 aa10.88□□□□□ -0.67
TGFB3-201ENST00000238682 BLOC1S2Q6QNY1 142 aa10.88□□□□□ -0.67
TGFB3-201ENST00000238682 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.88□□□□□ -0.67
TGFB3-201ENST00000238682 METTL16Q86W50 562 aaKnown RBP10.88□□□□□ -0.67
TGFB3-201ENST00000238682 MS4A4AQ96JQ5 239 aa10.88□□□□□ -0.67
TGFB3-201ENST00000238682 TMEM87BQ96K49 555 aa10.88□□□□□ -0.67
TGFB3-201ENST00000238682 OSBPL5Q9H0X9 879 aaPredicted RBP10.88□□□□□ -0.67
TGFB3-201ENST00000238682 AATFQ9NY61 560 aaKnown RBP eCLIP10.88□□□□□ -0.67
TGFB3-201ENST00000238682 SYNPO2Q9UMS6 1093 aa10.88□□□□□ -0.67
TGFB3-201ENST00000238682 SNCAIPQ9Y6H5 919 aa10.88□□□□□ -0.67
TGFB3-201ENST00000238682 TCP10L2B9ZVM9 353 aa10.88□□□□□ -0.67
TGFB3-201ENST00000238682 CYP21A2P08686 494 aa10.88□□□□□ -0.67
TGFB3-201ENST00000238682 PPARAQ07869 468 aa10.88□□□□□ -0.67
TGFB3-201ENST00000238682 SMYD5Q6GMV2 418 aa10.88□□□□□ -0.67
TGFB3-201ENST00000238682 CCDC129Q6ZRS4 1044 aa10.88□□□□□ -0.67
TGFB3-201ENST00000238682 DHX32Q7L7V1 743 aaKnown RBP10.88□□□□□ -0.67
TGFB3-201ENST00000238682 GTF3C2Q8WUA4 911 aaPredicted RBP10.88□□□□□ -0.67
TGFB3-201ENST00000238682 AGXT2Q9BYV1 514 aa10.88□□□□□ -0.67
TGFB3-201ENST00000238682 SH2B1Q9NRF2 756 aaPredicted RBP10.88□□□□□ -0.67
TGFB3-201ENST00000238682 PLIN4Q96Q06 1357 aa10.87□□□□□ -0.67
TGFB3-201ENST00000238682 CCL15-CCL14A0A0B4J2E2 113 aa10.87□□□□□ -0.67
TGFB3-201ENST00000238682 APPP05067 770 aa10.87□□□□□ -0.67
TGFB3-201ENST00000238682 HLA-DOAP06340 250 aa10.87□□□□□ -0.67
TGFB3-201ENST00000238682 RPS6KB1P23443 525 aa10.87□□□□□ -0.67
TGFB3-201ENST00000238682 SP3Q02447 781 aa10.87□□□□□ -0.67
TGFB3-201ENST00000238682 PPP2R5BQ15173 497 aa10.87□□□□□ -0.67
TGFB3-201ENST00000238682 CCL15Q16663 113 aa10.87□□□□□ -0.67
TGFB3-201ENST00000238682 C12orf60Q5U649 245 aa10.87□□□□□ -0.67
TGFB3-201ENST00000238682 CDC42EP5Q6NZY7 148 aa10.87□□□□□ -0.67
TGFB3-201ENST00000238682 MOB2Q70IA6 237 aa10.87□□□□□ -0.67
TGFB3-201ENST00000238682 PARK7Q99497 189 aaKnown RBP10.87□□□□□ -0.67
TGFB3-201ENST00000238682 EPB41L4AQ9HCS5 686 aaPredicted RBP10.87□□□□□ -0.67
TGFB3-201ENST00000238682 TCP11L1Q9NUJ3 509 aa10.87□□□□□ -0.67
TGFB3-201ENST00000238682 RYDENQ9NUL5 291 aaKnown RBP10.87□□□□□ -0.67
TGFB3-201ENST00000238682 USP40Q9NVE5 1235 aa10.87□□□□□ -0.67
TGFB3-201ENST00000238682 ISY1Q9ULR0 285 aaKnown RBP10.87□□□□□ -0.67
TGFB3-201ENST00000238682 E7EWF7 191 aa10.87□□□□□ -0.67
TGFB3-201ENST00000238682 MAFGO15525 162 aa10.87□□□□□ -0.67
TGFB3-201ENST00000238682 MCM5P33992 734 aa10.87□□□□□ -0.67
TGFB3-201ENST00000238682 EVCP57679 992 aa10.87□□□□□ -0.67
TGFB3-201ENST00000238682 PABPC4Q13310 644 aaKnown RBP eCLIP10.87□□□□□ -0.67
TGFB3-201ENST00000238682 CTR9Q6PD62 1173 aa10.87□□□□□ -0.67
TGFB3-201ENST00000238682 DLK2Q6UY11 383 aa10.87□□□□□ -0.67
TGFB3-201ENST00000238682 MFSD6Q6ZSS7 791 aa10.87□□□□□ -0.67
TGFB3-201ENST00000238682 RALYLQ86SE5 291 aaKnown RBP10.87□□□□□ -0.67
TGFB3-201ENST00000238682 FOXP4Q8IVH2 680 aaPredicted RBP10.87□□□□□ -0.67
TGFB3-201ENST00000238682 SH3RF3Q8TEJ3 882 aaPredicted RBP10.87□□□□□ -0.67
TGFB3-201ENST00000238682 CALR3Q96L12 384 aaKnown RBP10.87□□□□□ -0.67
TGFB3-201ENST00000238682 REPIN1Q9BWE0 567 aaKnown RBP10.87□□□□□ -0.67
TGFB3-201ENST00000238682 ELP3Q9H9T3 547 aa10.87□□□□□ -0.67
TGFB3-201ENST00000238682 HERC5Q9UII4 1024 aaKnown RBP10.87□□□□□ -0.67
TGFB3-201ENST00000238682 MYH1P12882 1939 aa10.87□□□□□ -0.67
TGFB3-201ENST00000238682 FLT1P17948 1338 aa10.86□□□□□ -0.67
TGFB3-201ENST00000238682 NID2Q14112 1375 aa10.86□□□□□ -0.67
TGFB3-201ENST00000238682 CTNND1O60716 968 aaKnown RBP10.86□□□□□ -0.67
TGFB3-201ENST00000238682 CD2BP2O95400 341 aaKnown RBP10.86□□□□□ -0.67
TGFB3-201ENST00000238682 SART3Q15020 963 aaKnown RBP10.86□□□□□ -0.67
TGFB3-201ENST00000238682 SCYL3Q8IZE3 742 aa10.86□□□□□ -0.67
TGFB3-201ENST00000238682 MIGA1Q8NAN2 632 aa10.86□□□□□ -0.67
TGFB3-201ENST00000238682 ESR2Q92731 530 aa10.86□□□□□ -0.67
TGFB3-201ENST00000238682 WRNIP1Q96S55 665 aa10.86□□□□□ -0.67
TGFB3-201ENST00000238682 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.86□□□□□ -0.67
TGFB3-201ENST00000238682 PTPN22Q9Y2R2 807 aa10.86□□□□□ -0.67
TGFB3-201ENST00000238682 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.86□□□□□ -0.67
TGFB3-201ENST00000238682 TBC1D8O95759 1140 aa10.86□□□□□ -0.67
TGFB3-201ENST00000238682 DYNLL1P63167 89 aaKnown RBP10.86□□□□□ -0.67
TGFB3-201ENST00000238682 EXOSC10Q01780 885 aaKnown RBP10.86□□□□□ -0.67
TGFB3-201ENST00000238682 GRIK5Q16478 980 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms