RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 RESP18Q5W5W9 173 aa18.38■□□□□ 0.53
ITGA4-201ENST00000233573 RTKN2Q8IZC4 609 aa18.38■□□□□ 0.53
ITGA4-201ENST00000233573 PNMA1Q8ND90 353 aa18.38■□□□□ 0.53
ITGA4-201ENST00000233573 TNFRSF25Q93038 417 aa18.38■□□□□ 0.53
ITGA4-201ENST00000233573 CCDC39Q9UFE4 941 aa18.38■□□□□ 0.53
ITGA4-201ENST00000233573 CUTAO60888 179 aa18.38■□□□□ 0.53
ITGA4-201ENST00000233573 ZNF165P49910 485 aa18.38■□□□□ 0.53
ITGA4-201ENST00000233573 PICALMQ13492 652 aa18.38■□□□□ 0.53
ITGA4-201ENST00000233573 GRM4Q14833 912 aa18.38■□□□□ 0.53
ITGA4-201ENST00000233573 STX1AQ16623 288 aa18.38■□□□□ 0.53
ITGA4-201ENST00000233573 ZNF444Q8N0Y2 327 aaPredicted RBP18.38■□□□□ 0.53
ITGA4-201ENST00000233573 TIGD1Q96MW7 591 aa18.38■□□□□ 0.53
ITGA4-201ENST00000233573 MORC2Q9Y6X9 1032 aaPredicted RBP18.38■□□□□ 0.53
ITGA4-201ENST00000233573 KIF5BP33176 963 aa18.37■□□□□ 0.53
ITGA4-201ENST00000233573 IQCB1Q15051 598 aa18.37■□□□□ 0.53
ITGA4-201ENST00000233573 C11orf57Q6ZUT1 292 aaPredicted RBP18.37■□□□□ 0.53
ITGA4-201ENST00000233573 TEKT1Q969V4 418 aa18.37■□□□□ 0.53
ITGA4-201ENST00000233573 CLIC6Q96NY7 704 aa18.37■□□□□ 0.53
ITGA4-201ENST00000233573 PSMD1Q99460 953 aa18.37■□□□□ 0.53
ITGA4-201ENST00000233573 ZNF287Q9HBT7 754 aa18.37■□□□□ 0.53
ITGA4-201ENST00000233573 PCDHB6Q9Y5E3 794 aa18.37■□□□□ 0.53
ITGA4-201ENST00000233573 KRT2P35908 639 aa18.37■□□□□ 0.53
ITGA4-201ENST00000233573 CRKP46108 304 aa18.37■□□□□ 0.53
ITGA4-201ENST00000233573 PFKFB3Q16875 520 aaPredicted RBP18.37■□□□□ 0.53
ITGA4-201ENST00000233573 EARS2Q5JPH6 523 aaKnown RBP18.37■□□□□ 0.53
ITGA4-201ENST00000233573 APOBEC3HQ6NTF7 200 aaKnown RBP18.37■□□□□ 0.53
ITGA4-201ENST00000233573 DDX4Q9NQI0 724 aaKnown RBP18.37■□□□□ 0.53
ITGA4-201ENST00000233573 FBXO2Q9UK22 296 aaPredicted RBP18.37■□□□□ 0.53
ITGA4-201ENST00000233573 SCG2P13521 617 aa18.36■□□□□ 0.53
ITGA4-201ENST00000233573 PTGER2P43116 358 aa18.36■□□□□ 0.53
ITGA4-201ENST00000233573 NOVP48745 357 aa18.36■□□□□ 0.53
ITGA4-201ENST00000233573 LARGE2Q8N3Y3 721 aa18.36■□□□□ 0.53
ITGA4-201ENST00000233573 KRI1Q8N9T8 703 aaKnown RBP18.36■□□□□ 0.53
ITGA4-201ENST00000233573 NEDD1Q8NHV4 660 aa18.36■□□□□ 0.53
ITGA4-201ENST00000233573 ERCC4Q92889 916 aaPredicted RBP18.36■□□□□ 0.53
ITGA4-201ENST00000233573 SDF4Q9BRK5 362 aa18.36■□□□□ 0.53
ITGA4-201ENST00000233573 CABP5Q9NP86 173 aa18.36■□□□□ 0.53
ITGA4-201ENST00000233573 USP40Q9NVE5 1235 aa18.36■□□□□ 0.53
ITGA4-201ENST00000233573 KIAA1468Q9P260 1216 aa18.36■□□□□ 0.53
ITGA4-201ENST00000233573 MAD2L2Q9UI95 211 aa18.36■□□□□ 0.53
ITGA4-201ENST00000233573 BAZ2BQ9UIF8 2168 aaKnown RBP18.36■□□□□ 0.53
ITGA4-201ENST00000233573 FAM205CA6NFA0 338 aa18.35■□□□□ 0.53
ITGA4-201ENST00000233573 VEGFAP15692 232 aaPredicted RBP18.35■□□□□ 0.53
ITGA4-201ENST00000233573 PTPREP23469 700 aa18.35■□□□□ 0.53
ITGA4-201ENST00000233573 SLC35G1Q2M3R5 365 aa18.35■□□□□ 0.53
ITGA4-201ENST00000233573 DALRD3Q5D0E6 543 aaKnown RBP18.35■□□□□ 0.53
ITGA4-201ENST00000233573 CDC42EP5Q6NZY7 148 aa18.35■□□□□ 0.53
ITGA4-201ENST00000233573 STAG2Q8N3U4 1231 aa18.35■□□□□ 0.53
ITGA4-201ENST00000233573 TMEM47Q9BQJ4 181 aa18.35■□□□□ 0.53
ITGA4-201ENST00000233573 SRCAPQ6ZRS2 3230 aa18.35■□□□□ 0.53
ITGA4-201ENST00000233573 RAD17O75943 681 aa18.35■□□□□ 0.53
ITGA4-201ENST00000233573 HHIPL2Q6UWX4 724 aa18.35■□□□□ 0.53
ITGA4-201ENST00000233573 ZKSCAN5Q9Y2L8 839 aa18.35■□□□□ 0.53
ITGA4-201ENST00000233573 PSME4Q14997 1843 aa18.35■□□□□ 0.53
ITGA4-201ENST00000233573 SYKP43405 635 aa18.34■□□□□ 0.53
ITGA4-201ENST00000233573 CACNB3P54284 484 aa18.34■□□□□ 0.53
ITGA4-201ENST00000233573 GABPAQ06546 454 aa18.34■□□□□ 0.53
ITGA4-201ENST00000233573 ANO10Q9NW15 660 aa18.34■□□□□ 0.53
ITGA4-201ENST00000233573 A0A087WWV3 80 aa18.34■□□□□ 0.53
ITGA4-201ENST00000233573 RBM5P52756 815 aaKnown RBP eCLIP18.34■□□□□ 0.53
ITGA4-201ENST00000233573 FKBP1AP62942 108 aaKnown RBP18.34■□□□□ 0.53
ITGA4-201ENST00000233573 NFIAQ12857 509 aa18.34■□□□□ 0.53
ITGA4-201ENST00000233573 GRIPAP1Q4V328 841 aa18.34■□□□□ 0.53
ITGA4-201ENST00000233573 PLIN4Q96Q06 1357 aa18.34■□□□□ 0.53
ITGA4-201ENST00000233573 PALM3A6NDB9 673 aaPredicted RBP18.33■□□□□ 0.52
ITGA4-201ENST00000233573 GRIN1Q05586 938 aa18.33■□□□□ 0.52
ITGA4-201ENST00000233573 ZNF579Q8NAF0 562 aaKnown RBP18.33■□□□□ 0.52
ITGA4-201ENST00000233573 ZDHHC15Q96MV8 337 aa18.33■□□□□ 0.52
ITGA4-201ENST00000233573 GNAQP50148 359 aa18.32■□□□□ 0.52
ITGA4-201ENST00000233573 NOM1Q5C9Z4 860 aaKnown RBP18.32■□□□□ 0.52
ITGA4-201ENST00000233573 SH3GLB2Q9NR46 395 aa18.32■□□□□ 0.52
ITGA4-201ENST00000233573 STX8Q9UNK0 236 aa18.32■□□□□ 0.52
ITGA4-201ENST00000233573 CEP131Q9UPN4 1083 aa18.32■□□□□ 0.52
ITGA4-201ENST00000233573 SRPRBQ9Y5M8 271 aaKnown RBP18.32■□□□□ 0.52
ITGA4-201ENST00000233573 FER1L6Q2WGJ9 1857 aa18.32■□□□□ 0.52
ITGA4-201ENST00000233573 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.32■□□□□ 0.52
ITGA4-201ENST00000233573 PSMD14O00487 310 aa18.32■□□□□ 0.52
ITGA4-201ENST00000233573 WNT7AO00755 349 aa18.32■□□□□ 0.52
ITGA4-201ENST00000233573 CYTH3O43739 400 aa18.32■□□□□ 0.52
ITGA4-201ENST00000233573 BRMS1Q9HCU9 246 aa18.32■□□□□ 0.52
ITGA4-201ENST00000233573 KCNH3Q9ULD8 1083 aa18.32■□□□□ 0.52
ITGA4-201ENST00000233573 BCS1LQ9Y276 419 aa18.32■□□□□ 0.52
ITGA4-201ENST00000233573 ADAMTS3O15072 1205 aa18.31■□□□□ 0.52
ITGA4-201ENST00000233573 DHX40Q8IX18 779 aaKnown RBP18.31■□□□□ 0.52
ITGA4-201ENST00000233573 ELOA2Q8IYF1 753 aaPredicted RBP18.31■□□□□ 0.52
ITGA4-201ENST00000233573 NLGN2Q8NFZ4 835 aa18.31■□□□□ 0.52
ITGA4-201ENST00000233573 TUBE1Q9UJT0 475 aa18.31■□□□□ 0.52
ITGA4-201ENST00000233573 MYH8P13535 1937 aa18.31■□□□□ 0.52
ITGA4-201ENST00000233573 TRIM75PA6NK02 468 aa18.3■□□□□ 0.52
ITGA4-201ENST00000233573 MSNP26038 577 aaKnown RBP18.3■□□□□ 0.52
ITGA4-201ENST00000233573 PLCB2Q00722 1185 aa18.3■□□□□ 0.52
ITGA4-201ENST00000233573 SOGA3Q5TF21 947 aa18.3■□□□□ 0.52
ITGA4-201ENST00000233573 ZFPM1Q8IX07 1006 aa18.3■□□□□ 0.52
ITGA4-201ENST00000233573 CEP95Q96GE4 821 aa18.3■□□□□ 0.52
ITGA4-201ENST00000233573 MRIQ9BWK5 157 aa18.3■□□□□ 0.52
ITGA4-201ENST00000233573 ZBTB12Q9Y330 459 aaPredicted RBP18.3■□□□□ 0.52
ITGA4-201ENST00000233573 CD2APQ9Y5K6 639 aa18.3■□□□□ 0.52
ITGA4-201ENST00000233573 NFKBIEO00221 500 aa18.3■□□□□ 0.52
ITGA4-201ENST00000233573 PTMAP06454 111 aaKnown RBP18.3■□□□□ 0.52
ITGA4-201ENST00000233573 SLURP2P0DP57 97 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms