RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 GNAQP50148 359 aa25.01■■□□□ 1.59
SMARCD2-201ENST00000225742 DPYDQ12882 1025 aa25.01■■□□□ 1.59
SMARCD2-201ENST00000225742 ZNF174Q15697 407 aa25.01■■□□□ 1.59
SMARCD2-201ENST00000225742 EPSTI1Q96J88 318 aa25.01■■□□□ 1.59
SMARCD2-201ENST00000225742 hCG_1642624A0A1W2PR95 340 aa25■■□□□ 1.59
SMARCD2-201ENST00000225742 STX10O60499 249 aa25■■□□□ 1.59
SMARCD2-201ENST00000225742 NR1I3Q14994 352 aa25■■□□□ 1.59
SMARCD2-201ENST00000225742 FAM47AQ5JRC9 791 aa25■■□□□ 1.59
SMARCD2-201ENST00000225742 C12orf60Q5U649 245 aa25■■□□□ 1.59
SMARCD2-201ENST00000225742 A0A087X0B3 334 aa25■■□□□ 1.59
SMARCD2-201ENST00000225742 A0A1B0GTH6 734 aa25■■□□□ 1.59
SMARCD2-201ENST00000225742 CYP2D6P10635 497 aa25■■□□□ 1.59
SMARCD2-201ENST00000225742 PTGDRQ13258 359 aa25■■□□□ 1.59
SMARCD2-201ENST00000225742 CCDC93Q567U6 631 aa25■■□□□ 1.59
SMARCD2-201ENST00000225742 ARL6IP4Q66PJ3 421 aaKnown RBP25■■□□□ 1.59
SMARCD2-201ENST00000225742 RCSD1Q6JBY9 416 aa25■■□□□ 1.59
SMARCD2-201ENST00000225742 CERS3Q8IU89 383 aa25■■□□□ 1.59
SMARCD2-201ENST00000225742 TMEM139Q8IV31 216 aa25■■□□□ 1.59
SMARCD2-201ENST00000225742 IQUBQ8NA54 791 aa25■■□□□ 1.59
SMARCD2-201ENST00000225742 KAT14Q9H8E8 782 aa25■■□□□ 1.59
SMARCD2-201ENST00000225742 KCNQ4P56696 695 aa24.99■■□□□ 1.59
SMARCD2-201ENST00000225742 CUL4BQ13620 913 aa24.99■■□□□ 1.59
SMARCD2-201ENST00000225742 ZNF827Q17R98 1081 aa24.99■■□□□ 1.59
SMARCD2-201ENST00000225742 SYT10Q6XYQ8 523 aa24.99■■□□□ 1.59
SMARCD2-201ENST00000225742 C15orf52Q6ZUT6 534 aaKnown RBP24.99■■□□□ 1.59
SMARCD2-201ENST00000225742 HOMER1Q86YM7 354 aa24.99■■□□□ 1.59
SMARCD2-201ENST00000225742 AMOTL1Q8IY63 956 aa24.99■■□□□ 1.59
SMARCD2-201ENST00000225742 TCP11L1Q9NUJ3 509 aa24.99■■□□□ 1.59
SMARCD2-201ENST00000225742 MCM9Q9NXL9 1143 aa24.99■■□□□ 1.59
SMARCD2-201ENST00000225742 MKRN1Q9UHC7 482 aaKnown RBP24.99■■□□□ 1.59
SMARCD2-201ENST00000225742 TOM1O60784 492 aa24.98■■□□□ 1.59
SMARCD2-201ENST00000225742 LDHBP07195 334 aaKnown RBP24.98■■□□□ 1.59
SMARCD2-201ENST00000225742 PPP4CP60510 307 aa24.98■■□□□ 1.59
SMARCD2-201ENST00000225742 ZNF397Q8NF99 534 aaPredicted RBP24.98■■□□□ 1.59
SMARCD2-201ENST00000225742 MED15Q96RN5 788 aa24.98■■□□□ 1.59
SMARCD2-201ENST00000225742 CTAGE1Q96RT6 745 aa24.98■■□□□ 1.59
SMARCD2-201ENST00000225742 BAG1Q99933 345 aaPredicted RBP24.98■■□□□ 1.59
SMARCD2-201ENST00000225742 CCNL1Q9UK58 526 aaPredicted RBP24.98■■□□□ 1.59
SMARCD2-201ENST00000225742 NMT2O60551 498 aa24.98■■□□□ 1.59
SMARCD2-201ENST00000225742 BAG3O95817 575 aa24.98■■□□□ 1.59
SMARCD2-201ENST00000225742 LDHCP07864 332 aa24.98■■□□□ 1.59
SMARCD2-201ENST00000225742 REXO1L1PQ8IX06 675 aa24.98■■□□□ 1.59
SMARCD2-201ENST00000225742 SBF2Q86WG5 1849 aa24.97■■□□□ 1.59
SMARCD2-201ENST00000225742 PRKCSHP14314 528 aaPredicted RBP24.97■■□□□ 1.59
SMARCD2-201ENST00000225742 AFMP43652 599 aa24.97■■□□□ 1.59
SMARCD2-201ENST00000225742 GRAPQ13588 217 aa24.97■■□□□ 1.59
SMARCD2-201ENST00000225742 GRM4Q14833 912 aa24.97■■□□□ 1.59
SMARCD2-201ENST00000225742 GALNT17Q6IS24 598 aa24.97■■□□□ 1.59
SMARCD2-201ENST00000225742 TRMT44Q8IYL2 757 aaKnown RBP24.97■■□□□ 1.59
SMARCD2-201ENST00000225742 GRAPLQ8TC17 118 aaPredicted RBP24.97■■□□□ 1.59
SMARCD2-201ENST00000225742 SRRTQ9BXP5 876 aaKnown RBP24.97■■□□□ 1.59
SMARCD2-201ENST00000225742 SYNRGQ9UMZ2 1314 aa24.97■■□□□ 1.59
SMARCD2-201ENST00000225742 TAF1LQ8IZX4 1826 aa24.97■■□□□ 1.59
SMARCD2-201ENST00000225742 VWA3AA6NCI4 1184 aa24.96■■□□□ 1.59
SMARCD2-201ENST00000225742 USP5P45974 858 aa24.96■■□□□ 1.59
SMARCD2-201ENST00000225742 TFAP4Q01664 338 aa24.96■■□□□ 1.59
SMARCD2-201ENST00000225742 E2F4Q16254 413 aa24.96■■□□□ 1.59
SMARCD2-201ENST00000225742 ARHGEF1Q92888 912 aaKnown RBP24.96■■□□□ 1.59
SMARCD2-201ENST00000225742 SAMSN1Q9NSI8 373 aaKnown RBP24.96■■□□□ 1.59
SMARCD2-201ENST00000225742 TNRC6CQ9HCJ0 1690 aaKnown RBP24.96■■□□□ 1.59
SMARCD2-201ENST00000225742 LY75O60449 1722 aa24.96■■□□□ 1.59
SMARCD2-201ENST00000225742 WNT7AO00755 349 aa24.96■■□□□ 1.59
SMARCD2-201ENST00000225742 GTPBP6O43824 516 aaPredicted RBP24.96■■□□□ 1.59
SMARCD2-201ENST00000225742 LONP1P36776 959 aaKnown RBP24.96■■□□□ 1.59
SMARCD2-201ENST00000225742 CDKAL1Q5VV42 579 aa24.96■■□□□ 1.59
SMARCD2-201ENST00000225742 PIK3AP1Q6ZUJ8 805 aa24.96■■□□□ 1.59
SMARCD2-201ENST00000225742 BLIDQ8IZY5 108 aa24.96■■□□□ 1.59
SMARCD2-201ENST00000225742 TC2NQ8N9U0 490 aa24.96■■□□□ 1.59
SMARCD2-201ENST00000225742 NGLY1Q96IV0 654 aa24.96■■□□□ 1.59
SMARCD2-201ENST00000225742 OGFRQ9NZT2 677 aa24.96■■□□□ 1.59
SMARCD2-201ENST00000225742 USP17L8P0C7I0 530 aa24.95■■□□□ 1.58
SMARCD2-201ENST00000225742 TRIM65Q6PJ69 517 aa24.95■■□□□ 1.58
SMARCD2-201ENST00000225742 ZNF804AQ7Z570 1209 aa24.95■■□□□ 1.58
SMARCD2-201ENST00000225742 TXNRD3Q86VQ6 643 aa24.95■■□□□ 1.58
SMARCD2-201ENST00000225742 PANX2Q96RD6 677 aa24.95■■□□□ 1.58
SMARCD2-201ENST00000225742 LZTS2Q9BRK4 669 aa24.95■■□□□ 1.58
SMARCD2-201ENST00000225742 PCDHA4Q9UN74 947 aa24.95■■□□□ 1.58
SMARCD2-201ENST00000225742 PPP2R2CQ9Y2T4 447 aa24.95■■□□□ 1.58
SMARCD2-201ENST00000225742 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.95■■□□□ 1.58
SMARCD2-201ENST00000225742 THSD7AQ9UPZ6 1657 aa24.95■■□□□ 1.58
SMARCD2-201ENST00000225742 PPP1R3GB7ZBB8 358 aa24.94■■□□□ 1.58
SMARCD2-201ENST00000225742 XDHP47989 1333 aa24.94■■□□□ 1.58
SMARCD2-201ENST00000225742 EVX2Q03828 476 aa24.94■■□□□ 1.58
SMARCD2-201ENST00000225742 FILIP1LQ4L180 1135 aa24.94■■□□□ 1.58
SMARCD2-201ENST00000225742 DAGLBQ8NCG7 672 aa24.94■■□□□ 1.58
SMARCD2-201ENST00000225742 PNMA1Q8ND90 353 aa24.94■■□□□ 1.58
SMARCD2-201ENST00000225742 ARID3AQ99856 593 aa24.94■■□□□ 1.58
SMARCD2-201ENST00000225742 RMND1Q9NWS8 449 aa24.94■■□□□ 1.58
SMARCD2-201ENST00000225742 NAV1Q8NEY1 1877 aa24.94■■□□□ 1.58
SMARCD2-201ENST00000225742 NAA30Q147X3 362 aaPredicted RBP24.93■■□□□ 1.58
SMARCD2-201ENST00000225742 NOM1Q5C9Z4 860 aaKnown RBP24.93■■□□□ 1.58
SMARCD2-201ENST00000225742 PDXDC2PQ6P474 469 aa24.93■■□□□ 1.58
SMARCD2-201ENST00000225742 SMIM5Q71RC9 77 aa24.93■■□□□ 1.58
SMARCD2-201ENST00000225742 CCDC148Q8NFR7 591 aa24.93■■□□□ 1.58
SMARCD2-201ENST00000225742 NAA15Q9BXJ9 866 aaKnown RBP24.93■■□□□ 1.58
SMARCD2-201ENST00000225742 ZNF287Q9HBT7 754 aa24.93■■□□□ 1.58
SMARCD2-201ENST00000225742 TXLNAP40222 546 aa24.93■■□□□ 1.58
SMARCD2-201ENST00000225742 SEMA3FQ13275 785 aa24.93■■□□□ 1.58
SMARCD2-201ENST00000225742 APTXQ7Z2E3 356 aaKnown RBP24.93■■□□□ 1.58
SMARCD2-201ENST00000225742 FNBP4Q8N3X1 1017 aaPredicted RBP24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms