RNA–Protein interactions for RNA: ENST00000225603.8

CBX1-201, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-201ENST00000225603 STAG2Q8N3U4 1231 aa20.97■□□□□ 0.95
CBX1-201ENST00000225603 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.97■□□□□ 0.95
CBX1-201ENST00000225603 EEF2P13639 858 aaKnown RBP20.96■□□□□ 0.95
CBX1-201ENST00000225603 EPHX2P34913 555 aa20.96■□□□□ 0.95
CBX1-201ENST00000225603 GRM4Q14833 912 aa20.96■□□□□ 0.95
CBX1-201ENST00000225603 CPLX2Q6PUV4 134 aaKnown RBP20.96■□□□□ 0.95
CBX1-201ENST00000225603 CTCFLQ8NI51 663 aaPredicted RBP20.96■□□□□ 0.95
CBX1-201ENST00000225603 CHAMP1Q96JM3 812 aa20.96■□□□□ 0.95
CBX1-201ENST00000225603 AIFM3Q96NN9 605 aa20.96■□□□□ 0.95
CBX1-201ENST00000225603 KANSL2Q9H9L4 492 aa20.96■□□□□ 0.95
CBX1-201ENST00000225603 PHF20L1A8MW92 1017 aa20.96■□□□□ 0.95
CBX1-201ENST00000225603 CDKL5O76039 1030 aa20.96■□□□□ 0.95
CBX1-201ENST00000225603 PPP2R5BQ15173 497 aa20.96■□□□□ 0.95
CBX1-201ENST00000225603 TMTC3Q6ZXV5 915 aa20.96■□□□□ 0.95
CBX1-201ENST00000225603 SRBD1Q8N5C6 995 aaKnown RBP20.96■□□□□ 0.95
CBX1-201ENST00000225603 SLC26A6Q9BXS9 759 aa20.96■□□□□ 0.95
CBX1-201ENST00000225603 GJB4Q9NTQ9 266 aa20.96■□□□□ 0.95
CBX1-201ENST00000225603 RBM28Q9NW13 759 aaKnown RBP20.96■□□□□ 0.95
CBX1-201ENST00000225603 MAD2L2Q9UI95 211 aa20.96■□□□□ 0.95
CBX1-201ENST00000225603 VPS37CA5D8V6 355 aaPredicted RBP20.95■□□□□ 0.94
CBX1-201ENST00000225603 CDC37L1Q7L3B6 337 aa20.95■□□□□ 0.94
CBX1-201ENST00000225603 GRPEL1Q9HAV7 217 aa20.95■□□□□ 0.94
CBX1-201ENST00000225603 POLR2AP24928 1970 aaKnown RBP20.95■□□□□ 0.94
CBX1-201ENST00000225603 WDR33Q9C0J8 1336 aaKnown RBP20.95■□□□□ 0.94
CBX1-201ENST00000225603 USP17L5A8MUK1 530 aa20.94■□□□□ 0.94
CBX1-201ENST00000225603 FMNL1O95466 1100 aaPredicted RBP20.94■□□□□ 0.94
CBX1-201ENST00000225603 ZSCAN22P10073 491 aaPredicted RBP20.94■□□□□ 0.94
CBX1-201ENST00000225603 PDCP20941 246 aa20.94■□□□□ 0.94
CBX1-201ENST00000225603 USP17L2Q6R6M4 530 aa20.94■□□□□ 0.94
CBX1-201ENST00000225603 MAP3K14Q99558 947 aa20.94■□□□□ 0.94
CBX1-201ENST00000225603 CABP5Q9NP86 173 aa20.94■□□□□ 0.94
CBX1-201ENST00000225603 FZD1Q9UP38 647 aa20.94■□□□□ 0.94
CBX1-201ENST00000225603 GOLGA8HP0CJ92 632 aa20.94■□□□□ 0.94
CBX1-201ENST00000225603 CAP2P40123 477 aa20.94■□□□□ 0.94
CBX1-201ENST00000225603 ICA1Q05084 483 aa20.94■□□□□ 0.94
CBX1-201ENST00000225603 SSRP1Q08945 709 aaKnown RBP20.94■□□□□ 0.94
CBX1-201ENST00000225603 SLC35G1Q2M3R5 365 aa20.94■□□□□ 0.94
CBX1-201ENST00000225603 OTUD7BQ6GQQ9 843 aa20.94■□□□□ 0.94
CBX1-201ENST00000225603 NYAP2Q9P242 653 aa20.94■□□□□ 0.94
CBX1-201ENST00000225603 ZBTB21Q9ULJ3 1066 aa20.94■□□□□ 0.94
CBX1-201ENST00000225603 PITPNM2Q9BZ72 1349 aa20.94■□□□□ 0.94
CBX1-201ENST00000225603 GAS2L3Q86XJ1 694 aa20.93■□□□□ 0.94
CBX1-201ENST00000225603 hCG_1642624A0A1W2PR95 340 aa20.93■□□□□ 0.94
CBX1-201ENST00000225603 PALM3A6NDB9 673 aaPredicted RBP20.93■□□□□ 0.94
CBX1-201ENST00000225603 PRPF40AO75400 957 aaKnown RBP20.93■□□□□ 0.94
CBX1-201ENST00000225603 GUCY1B3Q02153 619 aa20.93■□□□□ 0.94
CBX1-201ENST00000225603 USP50Q70EL3 339 aaPredicted RBP20.93■□□□□ 0.94
CBX1-201ENST00000225603 MKL1Q969V6 931 aa20.93■□□□□ 0.94
CBX1-201ENST00000225603 PANK2Q9BZ23 570 aa20.93■□□□□ 0.94
CBX1-201ENST00000225603 TAF1DQ9H5J8 278 aaPredicted RBP20.93■□□□□ 0.94
CBX1-201ENST00000225603 ADM5C9JUS6 153 aa20.92■□□□□ 0.94
CBX1-201ENST00000225603 PDHBP11177 359 aa20.92■□□□□ 0.94
CBX1-201ENST00000225603 KIF5BP33176 963 aa20.92■□□□□ 0.94
CBX1-201ENST00000225603 CPVLQ9H3G5 476 aa20.92■□□□□ 0.94
CBX1-201ENST00000225603 STK36Q9NRP7 1315 aa20.92■□□□□ 0.94
CBX1-201ENST00000225603 A0A1W2PRG0 241 aa20.92■□□□□ 0.94
CBX1-201ENST00000225603 CCDC84Q86UT8 332 aaPredicted RBP20.92■□□□□ 0.94
CBX1-201ENST00000225603 DCPSQ96C86 337 aaKnown RBP20.92■□□□□ 0.94
CBX1-201ENST00000225603 ALG1Q9BT22 464 aa20.92■□□□□ 0.94
CBX1-201ENST00000225603 V9GY48 417 aaPredicted RBP20.92■□□□□ 0.94
CBX1-201ENST00000225603 CNTNAP5Q8WYK1 1306 aa20.92■□□□□ 0.94
CBX1-201ENST00000225603 FERMT3Q86UX7 667 aa20.91■□□□□ 0.94
CBX1-201ENST00000225603 KIF3AQ9Y496 699 aa20.91■□□□□ 0.94
CBX1-201ENST00000225603 PPP2R3BQ9Y5P8 575 aa20.91■□□□□ 0.94
CBX1-201ENST00000225603 FRMPD2Q68DX3 1309 aaPredicted RBP20.91■□□□□ 0.94
CBX1-201ENST00000225603 BAZ2BQ9UIF8 2168 aaKnown RBP20.91■□□□□ 0.94
CBX1-201ENST00000225603 SSC5DA1L4H1 1573 aa20.91■□□□□ 0.94
CBX1-201ENST00000225603 F13A1P00488 732 aa20.9■□□□□ 0.94
CBX1-201ENST00000225603 PARP1P09874 1014 aaKnown RBP20.9■□□□□ 0.94
CBX1-201ENST00000225603 SNHG28P0DPA3 235 aa20.9■□□□□ 0.94
CBX1-201ENST00000225603 FOXD4L6Q3SYB3 417 aaPredicted RBP20.9■□□□□ 0.94
CBX1-201ENST00000225603 FOXD4L3Q6VB84 417 aaPredicted RBP20.9■□□□□ 0.94
CBX1-201ENST00000225603 TRIM22Q8IYM9 498 aa20.9■□□□□ 0.94
CBX1-201ENST00000225603 ACER1Q8TDN7 264 aa20.9■□□□□ 0.94
CBX1-201ENST00000225603 MYH4Q9Y623 1939 aa20.9■□□□□ 0.94
CBX1-201ENST00000225603 H3BQV1 296 aa20.9■□□□□ 0.94
CBX1-201ENST00000225603 INPP5BP32019 993 aa20.9■□□□□ 0.94
CBX1-201ENST00000225603 ECE1P42892 770 aa20.9■□□□□ 0.94
CBX1-201ENST00000225603 PKN1Q16512 942 aa20.9■□□□□ 0.94
CBX1-201ENST00000225603 EAPPQ56P03 285 aaPredicted RBP20.9■□□□□ 0.94
CBX1-201ENST00000225603 PPP4R3BQ5MIZ7 849 aa20.9■□□□□ 0.94
CBX1-201ENST00000225603 IFFO2Q5TF58 517 aa20.9■□□□□ 0.94
CBX1-201ENST00000225603 PIBF1Q8WXW3 757 aa20.9■□□□□ 0.94
CBX1-201ENST00000225603 C8orf76Q96K31 380 aa20.9■□□□□ 0.94
CBX1-201ENST00000225603 RNF26Q9BY78 433 aaPredicted RBP20.9■□□□□ 0.94
CBX1-201ENST00000225603 KLRF2D3W0D1 207 aa20.89■□□□□ 0.94
CBX1-201ENST00000225603 PRPF3O43395 683 aaKnown RBP20.89■□□□□ 0.94
CBX1-201ENST00000225603 CYTH3O43739 400 aa20.89■□□□□ 0.94
CBX1-201ENST00000225603 KRT26Q7Z3Y9 468 aa20.89■□□□□ 0.94
CBX1-201ENST00000225603 SULF1Q8IWU6 871 aa20.89■□□□□ 0.94
CBX1-201ENST00000225603 IQCA1LA6NCM1 817 aa20.89■□□□□ 0.93
CBX1-201ENST00000225603 VEGFAP15692 232 aaPredicted RBP20.89■□□□□ 0.93
CBX1-201ENST00000225603 NCLP19338 710 aaKnown RBP20.89■□□□□ 0.93
CBX1-201ENST00000225603 CAVIN1Q6NZI2 390 aaKnown RBP20.89■□□□□ 0.93
CBX1-201ENST00000225603 GPT2Q8TD30 523 aa20.89■□□□□ 0.93
CBX1-201ENST00000225603 GLIS2Q9BZE0 524 aaPredicted RBP20.89■□□□□ 0.93
CBX1-201ENST00000225603 RTN4Q9NQC3 1192 aaKnown RBP20.89■□□□□ 0.93
CBX1-201ENST00000225603 DEXIO95424 95 aa20.88■□□□□ 0.93
CBX1-201ENST00000225603 DCAF15Q66K64 600 aa20.88■□□□□ 0.93
CBX1-201ENST00000225603 FBXO18Q8NFZ0 1043 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms