RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 TOP1P11387 765 aaKnown RBP20.23■□□□□ 0.83
GCDH-201ENST00000222214 SMARCA1P28370 1054 aa20.23■□□□□ 0.83
GCDH-201ENST00000222214 IQCB1Q15051 598 aa20.23■□□□□ 0.83
GCDH-201ENST00000222214 STRIP1Q5VSL9 837 aa20.23■□□□□ 0.83
GCDH-201ENST00000222214 GALNT17Q6IS24 598 aa20.23■□□□□ 0.83
GCDH-201ENST00000222214 OLFM4Q6UX06 510 aa20.23■□□□□ 0.83
GCDH-201ENST00000222214 TNFRSF25Q93038 417 aa20.23■□□□□ 0.83
GCDH-201ENST00000222214 BPIFA3Q9BQP9 254 aa20.23■□□□□ 0.83
GCDH-201ENST00000222214 KCNH3Q9ULD8 1083 aa20.23■□□□□ 0.83
GCDH-201ENST00000222214 hCG_1642624A0A1W2PR95 340 aa20.22■□□□□ 0.83
GCDH-201ENST00000222214 PALM3A6NDB9 673 aaPredicted RBP20.22■□□□□ 0.83
GCDH-201ENST00000222214 HDLBPQ00341 1268 aaKnown RBP20.22■□□□□ 0.83
GCDH-201ENST00000222214 NPY5RQ15761 445 aa20.22■□□□□ 0.83
GCDH-201ENST00000222214 CCDC148Q8NFR7 591 aa20.22■□□□□ 0.83
GCDH-201ENST00000222214 C10orf71Q711Q0 1435 aa20.22■□□□□ 0.83
GCDH-201ENST00000222214 BECN2A8MW95 431 aa20.21■□□□□ 0.83
GCDH-201ENST00000222214 GABPAQ06546 454 aa20.21■□□□□ 0.83
GCDH-201ENST00000222214 GRIPAP1Q4V328 841 aa20.21■□□□□ 0.83
GCDH-201ENST00000222214 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.21■□□□□ 0.83
GCDH-201ENST00000222214 FERMT2Q96AC1 680 aa20.21■□□□□ 0.83
GCDH-201ENST00000222214 CLIC6Q96NY7 704 aa20.21■□□□□ 0.83
GCDH-201ENST00000222214 ANO8Q9HCE9 1232 aaPredicted RBP20.21■□□□□ 0.83
GCDH-201ENST00000222214 F8W031 263 aaPredicted RBP20.21■□□□□ 0.83
GCDH-201ENST00000222214 EZH2Q15910 746 aaKnown RBP20.21■□□□□ 0.83
GCDH-201ENST00000222214 SARM1Q6SZW1 724 aa20.21■□□□□ 0.83
GCDH-201ENST00000222214 C11orf57Q6ZUT1 292 aaPredicted RBP20.21■□□□□ 0.83
GCDH-201ENST00000222214 SUPT20HQ8NEM7 779 aa20.21■□□□□ 0.83
GCDH-201ENST00000222214 SPZ1Q9BXG8 430 aa20.21■□□□□ 0.83
GCDH-201ENST00000222214 USP40Q9NVE5 1235 aa20.21■□□□□ 0.83
GCDH-201ENST00000222214 SLX4Q8IY92 1834 aa20.21■□□□□ 0.83
GCDH-201ENST00000222214 ZNF500O60304 480 aaPredicted RBP20.2■□□□□ 0.82
GCDH-201ENST00000222214 CCDC34Q96HJ3 373 aa20.2■□□□□ 0.82
GCDH-201ENST00000222214 ZDHHC15Q96MV8 337 aa20.2■□□□□ 0.82
GCDH-201ENST00000222214 RGS17Q9UGC6 210 aaPredicted RBP20.2■□□□□ 0.82
GCDH-201ENST00000222214 TUBE1Q9UJT0 475 aa20.2■□□□□ 0.82
GCDH-201ENST00000222214 AP5Z1O43299 807 aa20.19■□□□□ 0.82
GCDH-201ENST00000222214 NLRP12P59046 1061 aa20.19■□□□□ 0.82
GCDH-201ENST00000222214 PICALMQ13492 652 aa20.19■□□□□ 0.82
GCDH-201ENST00000222214 PPP4R3BQ5MIZ7 849 aa20.19■□□□□ 0.82
GCDH-201ENST00000222214 KRBA2Q6ZNG9 492 aa20.19■□□□□ 0.82
GCDH-201ENST00000222214 STAG2Q8N3U4 1231 aa20.19■□□□□ 0.82
GCDH-201ENST00000222214 MYH8P13535 1937 aa20.19■□□□□ 0.82
GCDH-201ENST00000222214 HLA-DOAP06340 250 aa20.19■□□□□ 0.82
GCDH-201ENST00000222214 PARP1P09874 1014 aaKnown RBP20.19■□□□□ 0.82
GCDH-201ENST00000222214 KANK3Q6NY19 840 aa20.19■□□□□ 0.82
GCDH-201ENST00000222214 DAGLBQ8NCG7 672 aa20.19■□□□□ 0.82
GCDH-201ENST00000222214 CNNM3Q8NE01 707 aa20.19■□□□□ 0.82
GCDH-201ENST00000222214 OSBPL5Q9H0X9 879 aaPredicted RBP20.19■□□□□ 0.82
GCDH-201ENST00000222214 DBNDD1Q9H9R9 158 aa20.19■□□□□ 0.82
GCDH-201ENST00000222214 SERPINB13Q9UIV8 391 aa20.19■□□□□ 0.82
GCDH-201ENST00000222214 CRKP46108 304 aa20.18■□□□□ 0.82
GCDH-201ENST00000222214 EN1Q05925 392 aaPredicted RBP20.18■□□□□ 0.82
GCDH-201ENST00000222214 TTC38Q5R3I4 469 aa20.18■□□□□ 0.82
GCDH-201ENST00000222214 CDC42EP5Q6NZY7 148 aa20.18■□□□□ 0.82
GCDH-201ENST00000222214 POTEAQ6S8J7 498 aa20.18■□□□□ 0.82
GCDH-201ENST00000222214 PLA2G4DQ86XP0 818 aa20.18■□□□□ 0.82
GCDH-201ENST00000222214 BLIDQ8IZY5 108 aa20.18■□□□□ 0.82
GCDH-201ENST00000222214 CCDC12Q8WUD4 166 aaPredicted RBP20.18■□□□□ 0.82
GCDH-201ENST00000222214 CEP95Q96GE4 821 aa20.18■□□□□ 0.82
GCDH-201ENST00000222214 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.18■□□□□ 0.82
GCDH-201ENST00000222214 PCDHA4Q9UN74 947 aa20.18■□□□□ 0.82
GCDH-201ENST00000222214 KLRF2D3W0D1 207 aa20.17■□□□□ 0.82
GCDH-201ENST00000222214 APOBEC3HQ6NTF7 200 aaKnown RBP20.17■□□□□ 0.82
GCDH-201ENST00000222214 C7orf43Q8WVR3 580 aa20.17■□□□□ 0.82
GCDH-201ENST00000222214 TRIM5Q9C035 493 aa20.17■□□□□ 0.82
GCDH-201ENST00000222214 EHD4Q9H223 541 aa20.17■□□□□ 0.82
GCDH-201ENST00000222214 ECE2O60344 883 aa20.17■□□□□ 0.82
GCDH-201ENST00000222214 CDC25BP30305 580 aa20.17■□□□□ 0.82
GCDH-201ENST00000222214 SCNN1DP51172 638 aa20.17■□□□□ 0.82
GCDH-201ENST00000222214 BARHL2Q9NY43 387 aa20.17■□□□□ 0.82
GCDH-201ENST00000222214 NPM3O75607 178 aaKnown RBP20.16■□□□□ 0.82
GCDH-201ENST00000222214 ATP2B1P20020 1258 aa20.16■□□□□ 0.82
GCDH-201ENST00000222214 ZNF75DP51815 510 aa20.16■□□□□ 0.82
GCDH-201ENST00000222214 EARS2Q5JPH6 523 aaKnown RBP20.16■□□□□ 0.82
GCDH-201ENST00000222214 DACT2Q5SW24 774 aa20.16■□□□□ 0.82
GCDH-201ENST00000222214 DHX40Q8IX18 779 aaKnown RBP20.16■□□□□ 0.82
GCDH-201ENST00000222214 DHX36Q9H2U1 1008 aaKnown RBP20.16■□□□□ 0.82
GCDH-201ENST00000222214 DDX4Q9NQI0 724 aaKnown RBP20.16■□□□□ 0.82
GCDH-201ENST00000222214 MTMR4Q9NYA4 1195 aa20.16■□□□□ 0.82
GCDH-201ENST00000222214 TPM4P67936 248 aa20.15■□□□□ 0.82
GCDH-201ENST00000222214 KIAA2012Q0VF49 1180 aa20.15■□□□□ 0.82
GCDH-201ENST00000222214 LONRF3Q496Y0 759 aa20.15■□□□□ 0.82
GCDH-201ENST00000222214 MXD3Q9BW11 206 aa20.15■□□□□ 0.82
GCDH-201ENST00000222214 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.15■□□□□ 0.82
GCDH-201ENST00000222214 IGKV6D-41A0A0C4DH26 115 aa20.15■□□□□ 0.82
GCDH-201ENST00000222214 FAM205CA6NFA0 338 aa20.15■□□□□ 0.82
GCDH-201ENST00000222214 SMTNL1A8MU46 457 aa20.15■□□□□ 0.82
GCDH-201ENST00000222214 hCG_1984214I3L0E3 225 aa20.15■□□□□ 0.82
GCDH-201ENST00000222214 CYTH3O43739 400 aa20.15■□□□□ 0.82
GCDH-201ENST00000222214 CHRNA5P30532 468 aa20.15■□□□□ 0.82
GCDH-201ENST00000222214 ATP2C1P98194 919 aaPredicted RBP20.15■□□□□ 0.82
GCDH-201ENST00000222214 PIK3AP1Q6ZUJ8 805 aa20.15■□□□□ 0.82
GCDH-201ENST00000222214 ZNF713Q8N859 430 aaPredicted RBP20.15■□□□□ 0.82
GCDH-201ENST00000222214 ERCC4Q92889 916 aaPredicted RBP20.15■□□□□ 0.82
GCDH-201ENST00000222214 CCDC17Q96LX7 622 aa20.15■□□□□ 0.82
GCDH-201ENST00000222214 PYM1Q9BRP8 204 aaKnown RBP20.15■□□□□ 0.82
GCDH-201ENST00000222214 CSRNP2Q9H175 543 aa20.15■□□□□ 0.82
GCDH-201ENST00000222214 SERPINA10Q9UK55 444 aa20.15■□□□□ 0.82
GCDH-201ENST00000222214 BAZ2BQ9UIF8 2168 aaKnown RBP20.15■□□□□ 0.82
GCDH-201ENST00000222214 ZNF646O15015 1829 aaPredicted RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms