RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 LEMD3Q9Y2U8 911 aa21.01■□□□□ 0.95
SMPD3-201ENST00000219334 XKR9Q5GH70 373 aa21■□□□□ 0.95
SMPD3-201ENST00000219334 KRT27Q7Z3Y8 459 aa21■□□□□ 0.95
SMPD3-201ENST00000219334 TMOD1P28289 359 aa21■□□□□ 0.95
SMPD3-201ENST00000219334 FAM173BQ6P4H8 233 aa21■□□□□ 0.95
SMPD3-201ENST00000219334 BLIDQ8IZY5 108 aa21■□□□□ 0.95
SMPD3-201ENST00000219334 KLRF2D3W0D1 207 aa21■□□□□ 0.95
SMPD3-201ENST00000219334 IL6STP40189 918 aaPredicted RBP21■□□□□ 0.95
SMPD3-201ENST00000219334 KLHL30Q0D2K2 578 aa21■□□□□ 0.95
SMPD3-201ENST00000219334 PFDN4Q9NQP4 134 aa21■□□□□ 0.95
SMPD3-201ENST00000219334 RDH13Q8NBN7 331 aa21■□□□□ 0.95
SMPD3-201ENST00000219334 INSRP06213 1382 aa21■□□□□ 0.95
SMPD3-201ENST00000219334 SERPINB2P05120 415 aa20.99■□□□□ 0.95
SMPD3-201ENST00000219334 LIG4P49917 911 aa20.99■□□□□ 0.95
SMPD3-201ENST00000219334 ITIH3Q06033 890 aa20.99■□□□□ 0.95
SMPD3-201ENST00000219334 SLFN12Q8IYM2 578 aa20.99■□□□□ 0.95
SMPD3-201ENST00000219334 BEND3Q5T5X7 828 aa20.99■□□□□ 0.95
SMPD3-201ENST00000219334 DPP9Q86TI2 863 aa20.99■□□□□ 0.95
SMPD3-201ENST00000219334 TMEM232C9JQI7 657 aa20.99■□□□□ 0.95
SMPD3-201ENST00000219334 SEMA3EO15041 775 aa20.99■□□□□ 0.95
SMPD3-201ENST00000219334 IRX5P78411 483 aaPredicted RBP20.99■□□□□ 0.95
SMPD3-201ENST00000219334 FANCCQ00597 558 aa20.99■□□□□ 0.95
SMPD3-201ENST00000219334 PPP2R5DQ14738 602 aa20.99■□□□□ 0.95
SMPD3-201ENST00000219334 SETDB1Q15047 1291 aa20.99■□□□□ 0.95
SMPD3-201ENST00000219334 NELFBQ8WX92 580 aa20.99■□□□□ 0.95
SMPD3-201ENST00000219334 PCDHA12Q9UN75 941 aa20.99■□□□□ 0.95
SMPD3-201ENST00000219334 ATF7P17544 494 aaPredicted RBP20.99■□□□□ 0.95
SMPD3-201ENST00000219334 SUPT20HL1Q3ZLR7 823 aa20.99■□□□□ 0.95
SMPD3-201ENST00000219334 KRT26Q7Z3Y9 468 aa20.99■□□□□ 0.95
SMPD3-201ENST00000219334 GPBP1Q86WP2 473 aa20.99■□□□□ 0.95
SMPD3-201ENST00000219334 EDC3Q96F86 508 aaKnown RBP20.99■□□□□ 0.95
SMPD3-201ENST00000219334 SUGCTQ9HAC7 445 aa20.99■□□□□ 0.95
SMPD3-201ENST00000219334 TAB2Q9NYJ8 693 aa20.99■□□□□ 0.95
SMPD3-201ENST00000219334 GNA14O95837 355 aa20.98■□□□□ 0.95
SMPD3-201ENST00000219334 CCDC17Q96LX7 622 aa20.98■□□□□ 0.95
SMPD3-201ENST00000219334 NRBP2Q9NSY0 501 aa20.98■□□□□ 0.95
SMPD3-201ENST00000219334 MAGEA1P43355 309 aa20.98■□□□□ 0.95
SMPD3-201ENST00000219334 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.98■□□□□ 0.95
SMPD3-201ENST00000219334 CCPG1Q9ULG6 757 aa20.98■□□□□ 0.95
SMPD3-201ENST00000219334 V9GYY5 206 aaPredicted RBP20.98■□□□□ 0.95
SMPD3-201ENST00000219334 ERCC3P19447 782 aa20.98■□□□□ 0.95
SMPD3-201ENST00000219334 TEKT3Q9BXF9 490 aa20.98■□□□□ 0.95
SMPD3-201ENST00000219334 ST7Q9NRC1 585 aa20.98■□□□□ 0.95
SMPD3-201ENST00000219334 NLRP12P59046 1061 aa20.98■□□□□ 0.95
SMPD3-201ENST00000219334 UTP14CQ5TAP6 766 aaKnown RBP20.98■□□□□ 0.95
SMPD3-201ENST00000219334 NAPGQ99747 312 aaPredicted RBP20.98■□□□□ 0.95
SMPD3-201ENST00000219334 MED10Q9BTT4 135 aa20.98■□□□□ 0.95
SMPD3-201ENST00000219334 IVLP07476 585 aa20.98■□□□□ 0.95
SMPD3-201ENST00000219334 TRERF1Q96PN7 1200 aa20.98■□□□□ 0.95
SMPD3-201ENST00000219334 USP44Q9H0E7 712 aa20.98■□□□□ 0.95
SMPD3-201ENST00000219334 UTP11Q9Y3A2 253 aaKnown RBP20.98■□□□□ 0.95
SMPD3-201ENST00000219334 NFE2L3Q9Y4A8 694 aa20.98■□□□□ 0.95
SMPD3-201ENST00000219334 TNNC2P02585 160 aa20.97■□□□□ 0.95
SMPD3-201ENST00000219334 FANCBQ8NB91 859 aa20.97■□□□□ 0.95
SMPD3-201ENST00000219334 TM6SF1Q9BZW5 370 aa20.97■□□□□ 0.95
SMPD3-201ENST00000219334 SAMD15Q9P1V8 674 aa20.97■□□□□ 0.95
SMPD3-201ENST00000219334 ASAP1Q9ULH1 1129 aa20.97■□□□□ 0.95
SMPD3-201ENST00000219334 TTLL3Q9Y4R7 772 aa20.97■□□□□ 0.95
SMPD3-201ENST00000219334 TNKSO95271 1327 aa20.97■□□□□ 0.95
SMPD3-201ENST00000219334 ARHGAP44Q17R89 818 aa20.97■□□□□ 0.95
SMPD3-201ENST00000219334 SSH3Q8TE77 659 aa20.97■□□□□ 0.95
SMPD3-201ENST00000219334 NUCKS1Q9H1E3 243 aaKnown RBP20.97■□□□□ 0.95
SMPD3-201ENST00000219334 C8orf74Q6P047 294 aa20.97■□□□□ 0.95
SMPD3-201ENST00000219334 CCDC110Q8TBZ0 833 aa20.97■□□□□ 0.95
SMPD3-201ENST00000219334 SECISBP2LQ93073 1101 aaKnown RBP20.97■□□□□ 0.95
SMPD3-201ENST00000219334 BBOX1O75936 387 aa20.97■□□□□ 0.95
SMPD3-201ENST00000219334 TPD52P55327 224 aaPredicted RBP20.97■□□□□ 0.95
SMPD3-201ENST00000219334 PLA2G4DQ86XP0 818 aa20.97■□□□□ 0.95
SMPD3-201ENST00000219334 SEC62Q99442 399 aaKnown RBP20.97■□□□□ 0.95
SMPD3-201ENST00000219334 KDM2BQ8NHM5 1336 aa20.97■□□□□ 0.95
SMPD3-201ENST00000219334 SFMBT2Q5VUG0 894 aa20.96■□□□□ 0.95
SMPD3-201ENST00000219334 FAM160B1Q5W0V3 765 aa20.96■□□□□ 0.95
SMPD3-201ENST00000219334 CCDC121Q6ZUS5 278 aa20.96■□□□□ 0.95
SMPD3-201ENST00000219334 STAMQ92783 540 aa20.96■□□□□ 0.95
SMPD3-201ENST00000219334 GREM2Q9H772 168 aa20.96■□□□□ 0.95
SMPD3-201ENST00000219334 ASIC3Q9UHC3 531 aa20.96■□□□□ 0.95
SMPD3-201ENST00000219334 KIF24Q5T7B8 1368 aa20.96■□□□□ 0.95
SMPD3-201ENST00000219334 PTPRTO14522 1441 aa20.96■□□□□ 0.95
SMPD3-201ENST00000219334 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.96■□□□□ 0.95
SMPD3-201ENST00000219334 ZEB2O60315 1214 aa20.96■□□□□ 0.95
SMPD3-201ENST00000219334 PDE8BO95263 885 aa20.96■□□□□ 0.95
SMPD3-201ENST00000219334 RNASE9P60153 205 aaKnown RBP20.96■□□□□ 0.95
SMPD3-201ENST00000219334 GALNT17Q6IS24 598 aa20.96■□□□□ 0.95
SMPD3-201ENST00000219334 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.96■□□□□ 0.95
SMPD3-201ENST00000219334 PPANQ9NQ55 473 aaKnown RBP20.96■□□□□ 0.95
SMPD3-201ENST00000219334 XRCC6P12956 609 aaKnown RBP eCLIP20.96■□□□□ 0.95
SMPD3-201ENST00000219334 LRRC24Q50LG9 513 aa20.96■□□□□ 0.95
SMPD3-201ENST00000219334 TMTC1Q8IUR5 882 aa20.96■□□□□ 0.95
SMPD3-201ENST00000219334 SYCE1Q8N0S2 351 aa20.96■□□□□ 0.95
SMPD3-201ENST00000219334 GOLGA5Q8TBA6 731 aa20.96■□□□□ 0.95
SMPD3-201ENST00000219334 ZNF274Q96GC6 653 aaPredicted RBP20.96■□□□□ 0.95
SMPD3-201ENST00000219334 BLZF1Q9H2G9 400 aa20.96■□□□□ 0.95
SMPD3-201ENST00000219334 RTEL1Q9NZ71 1219 aa20.96■□□□□ 0.95
SMPD3-201ENST00000219334 CLRN2A0PK11 232 aa20.96■□□□□ 0.95
SMPD3-201ENST00000219334 SORBS3O60504 671 aa20.96■□□□□ 0.95
SMPD3-201ENST00000219334 JAK2O60674 1132 aa20.96■□□□□ 0.95
SMPD3-201ENST00000219334 CYP2J2P51589 502 aa20.95■□□□□ 0.94
SMPD3-201ENST00000219334 NEK8Q86SG6 692 aa20.95■□□□□ 0.94
SMPD3-201ENST00000219334 CSRNP1Q96S65 589 aa20.95■□□□□ 0.94
SMPD3-201ENST00000219334 RSPH14Q9UHP6 348 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms