RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 GNAQP50148 359 aa18.54■□□□□ 0.56
SNRPD3-201ENST00000215829 ATP2B2Q01814 1243 aa18.54■□□□□ 0.56
SNRPD3-201ENST00000215829 FUT2Q10981 343 aa18.54■□□□□ 0.56
SNRPD3-201ENST00000215829 TRIM22Q8IYM9 498 aa18.54■□□□□ 0.56
SNRPD3-201ENST00000215829 CMTR1Q8N1G2 835 aaKnown RBP18.54■□□□□ 0.56
SNRPD3-201ENST00000215829 LRRC47Q8N1G4 583 aaKnown RBP18.54■□□□□ 0.56
SNRPD3-201ENST00000215829 CCDC82Q8N4S0 544 aa18.54■□□□□ 0.56
SNRPD3-201ENST00000215829 TNPO1Q92973 898 aaKnown RBP18.54■□□□□ 0.56
SNRPD3-201ENST00000215829 SLC26A6Q9BXS9 759 aa18.54■□□□□ 0.56
SNRPD3-201ENST00000215829 MAD2L2Q9UI95 211 aa18.54■□□□□ 0.56
SNRPD3-201ENST00000215829 ZBTB21Q9ULJ3 1066 aa18.54■□□□□ 0.56
SNRPD3-201ENST00000215829 PALM3A6NDB9 673 aaPredicted RBP18.53■□□□□ 0.56
SNRPD3-201ENST00000215829 PLEKHA8P1O95397 391 aa18.53■□□□□ 0.56
SNRPD3-201ENST00000215829 SUPT20HL1Q3ZLR7 823 aa18.53■□□□□ 0.56
SNRPD3-201ENST00000215829 SULF1Q8IWU6 871 aa18.53■□□□□ 0.56
SNRPD3-201ENST00000215829 SRBD1Q8N5C6 995 aaKnown RBP18.53■□□□□ 0.56
SNRPD3-201ENST00000215829 MTMR7Q9Y216 660 aa18.53■□□□□ 0.56
SNRPD3-201ENST00000215829 MTMR6Q9Y217 621 aa18.53■□□□□ 0.56
SNRPD3-201ENST00000215829 PARP1P09874 1014 aaKnown RBP18.53■□□□□ 0.56
SNRPD3-201ENST00000215829 ZSCAN22P10073 491 aaPredicted RBP18.53■□□□□ 0.56
SNRPD3-201ENST00000215829 PDHBP11177 359 aa18.53■□□□□ 0.56
SNRPD3-201ENST00000215829 PNMA8AQ86V59 439 aaPredicted RBP18.53■□□□□ 0.56
SNRPD3-201ENST00000215829 STAG2Q8N3U4 1231 aa18.53■□□□□ 0.56
SNRPD3-201ENST00000215829 RNF26Q9BY78 433 aaPredicted RBP18.53■□□□□ 0.56
SNRPD3-201ENST00000215829 ZNF341Q9BYN7 854 aa18.53■□□□□ 0.56
SNRPD3-201ENST00000215829 GINM1Q9NU53 330 aa18.53■□□□□ 0.56
SNRPD3-201ENST00000215829 USP17L5A8MUK1 530 aa18.52■□□□□ 0.55
SNRPD3-201ENST00000215829 CTNND1O60716 968 aaKnown RBP18.52■□□□□ 0.55
SNRPD3-201ENST00000215829 ASNSP08243 561 aa18.52■□□□□ 0.55
SNRPD3-201ENST00000215829 SNHG28P0DPA3 235 aa18.52■□□□□ 0.55
SNRPD3-201ENST00000215829 LZTS2Q9BRK4 669 aa18.52■□□□□ 0.55
SNRPD3-201ENST00000215829 ZNF112Q9UJU3 913 aa18.52■□□□□ 0.55
SNRPD3-201ENST00000215829 SYNPO2Q9UMS6 1093 aa18.52■□□□□ 0.55
SNRPD3-201ENST00000215829 VPS37CA5D8V6 355 aaPredicted RBP18.51■□□□□ 0.55
SNRPD3-201ENST00000215829 PRPF3O43395 683 aaKnown RBP18.51■□□□□ 0.55
SNRPD3-201ENST00000215829 FOXD4L5Q5VV16 416 aaPredicted RBP18.51■□□□□ 0.55
SNRPD3-201ENST00000215829 USP17L2Q6R6M4 530 aa18.51■□□□□ 0.55
SNRPD3-201ENST00000215829 KRT26Q7Z3Y9 468 aa18.51■□□□□ 0.55
SNRPD3-201ENST00000215829 RGS22Q8NE09 1264 aa18.51■□□□□ 0.55
SNRPD3-201ENST00000215829 FOXD4L4Q8WXT5 416 aaPredicted RBP18.51■□□□□ 0.55
SNRPD3-201ENST00000215829 WASF1Q92558 559 aa18.51■□□□□ 0.55
SNRPD3-201ENST00000215829 H3BQV1 296 aa18.5■□□□□ 0.55
SNRPD3-201ENST00000215829 DEXIO95424 95 aa18.5■□□□□ 0.55
SNRPD3-201ENST00000215829 AKAP17AQ02040 695 aaKnown RBP18.5■□□□□ 0.55
SNRPD3-201ENST00000215829 EAPPQ56P03 285 aaPredicted RBP18.5■□□□□ 0.55
SNRPD3-201ENST00000215829 IFFO2Q5TF58 517 aa18.5■□□□□ 0.55
SNRPD3-201ENST00000215829 ALG1Q9BT22 464 aa18.5■□□□□ 0.55
SNRPD3-201ENST00000215829 ARHGEF10LQ9HCE6 1279 aa18.5■□□□□ 0.55
SNRPD3-201ENST00000215829 CNTNAP5Q8WYK1 1306 aa18.5■□□□□ 0.55
SNRPD3-201ENST00000215829 ADM5C9JUS6 153 aa18.5■□□□□ 0.55
SNRPD3-201ENST00000215829 KLRF2D3W0D1 207 aa18.5■□□□□ 0.55
SNRPD3-201ENST00000215829 GOLGA8HP0CJ92 632 aa18.5■□□□□ 0.55
SNRPD3-201ENST00000215829 SMARCA1P28370 1054 aa18.5■□□□□ 0.55
SNRPD3-201ENST00000215829 ASPRV1Q53RT3 343 aa18.5■□□□□ 0.55
SNRPD3-201ENST00000215829 CDC37L1Q7L3B6 337 aa18.5■□□□□ 0.55
SNRPD3-201ENST00000215829 RASGRP2Q7LDG7 609 aa18.5■□□□□ 0.55
SNRPD3-201ENST00000215829 GMCL1P1Q8NEA9 526 aa18.5■□□□□ 0.55
SNRPD3-201ENST00000215829 C8orf76Q96K31 380 aa18.5■□□□□ 0.55
SNRPD3-201ENST00000215829 V9GY48 417 aaPredicted RBP18.5■□□□□ 0.55
SNRPD3-201ENST00000215829 A0A1W2PRG0 241 aa18.49■□□□□ 0.55
SNRPD3-201ENST00000215829 UBE2Q2LH0YL09 131 aa18.49■□□□□ 0.55
SNRPD3-201ENST00000215829 F13A1P00488 732 aa18.49■□□□□ 0.55
SNRPD3-201ENST00000215829 FBXO18Q8NFZ0 1043 aa18.49■□□□□ 0.55
SNRPD3-201ENST00000215829 TMX2Q9Y320 296 aa18.49■□□□□ 0.55
SNRPD3-201ENST00000215829 ATAD5Q96QE3 1844 aa18.49■□□□□ 0.55
SNRPD3-201ENST00000215829 SSC5DA1L4H1 1573 aa18.49■□□□□ 0.55
SNRPD3-201ENST00000215829 F5H6K3 240 aa18.48■□□□□ 0.55
SNRPD3-201ENST00000215829 INPP5BP32019 993 aa18.48■□□□□ 0.55
SNRPD3-201ENST00000215829 FOSBP53539 338 aa18.48■□□□□ 0.55
SNRPD3-201ENST00000215829 KLRC3Q07444 240 aa18.48■□□□□ 0.55
SNRPD3-201ENST00000215829 ZNF543Q08ER8 600 aa18.48■□□□□ 0.55
SNRPD3-201ENST00000215829 SLFN13Q68D06 897 aa18.48■□□□□ 0.55
SNRPD3-201ENST00000215829 CLEC17AQ6ZS10 378 aa18.48■□□□□ 0.55
SNRPD3-201ENST00000215829 USP48Q86UV5 1035 aa18.48■□□□□ 0.55
SNRPD3-201ENST00000215829 DCAF4Q8WV16 495 aa18.48■□□□□ 0.55
SNRPD3-201ENST00000215829 KLRG1Q96E93 195 aa18.48■□□□□ 0.55
SNRPD3-201ENST00000215829 AIFM3Q96NN9 605 aa18.48■□□□□ 0.55
SNRPD3-201ENST00000215829 RBM27Q9P2N5 1060 aaKnown RBP18.48■□□□□ 0.55
SNRPD3-201ENST00000215829 ECE1P42892 770 aa18.47■□□□□ 0.55
SNRPD3-201ENST00000215829 PKN1Q16512 942 aa18.47■□□□□ 0.55
SNRPD3-201ENST00000215829 GPATCH4Q5T3I0 446 aaKnown RBP18.47■□□□□ 0.55
SNRPD3-201ENST00000215829 DLK2Q6UY11 383 aa18.47■□□□□ 0.55
SNRPD3-201ENST00000215829 ACER1Q8TDN7 264 aa18.47■□□□□ 0.55
SNRPD3-201ENST00000215829 WRNIP1Q96S55 665 aa18.47■□□□□ 0.55
SNRPD3-201ENST00000215829 SPZ1Q9BXG8 430 aa18.47■□□□□ 0.55
SNRPD3-201ENST00000215829 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.47■□□□□ 0.55
SNRPD3-201ENST00000215829 MYH6P13533 1939 aa18.47■□□□□ 0.55
SNRPD3-201ENST00000215829 FRMPD2Q68DX3 1309 aaPredicted RBP18.47■□□□□ 0.55
SNRPD3-201ENST00000215829 CYTH3O43739 400 aa18.47■□□□□ 0.55
SNRPD3-201ENST00000215829 VEGFAP15692 232 aaPredicted RBP18.47■□□□□ 0.55
SNRPD3-201ENST00000215829 SLC1A4P43007 532 aa18.47■□□□□ 0.55
SNRPD3-201ENST00000215829 SLC35G1Q2M3R5 365 aa18.47■□□□□ 0.55
SNRPD3-201ENST00000215829 SCYL3Q8IZE3 742 aa18.47■□□□□ 0.55
SNRPD3-201ENST00000215829 RAD21O60216 631 aa18.46■□□□□ 0.55
SNRPD3-201ENST00000215829 USP2O75604 605 aaPredicted RBP18.46■□□□□ 0.55
SNRPD3-201ENST00000215829 GUCY1B3Q02153 619 aa18.46■□□□□ 0.55
SNRPD3-201ENST00000215829 OTUD7BQ6GQQ9 843 aa18.46■□□□□ 0.55
SNRPD3-201ENST00000215829 GMCL1Q96IK5 515 aa18.46■□□□□ 0.55
SNRPD3-201ENST00000215829 GBP4Q96PP9 640 aa18.46■□□□□ 0.55
SNRPD3-201ENST00000215829 SH2D4AQ9H788 454 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms